Factsheet for HORVU4Hr1G061170.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G215500.1	Wheat	mitochondrion	97.86	97.98
TraesCS4A01G089400.1	Wheat	mitochondrion	97.15	97.27
TraesCS4B01G215000.1	Wheat	cytosol, mitochondrion	97.03	97.15
EER95134	Sorghum	mitochondrion	90.87	90.87
Os03t0263900-01	Rice	plasma membrane	91.22	90.68
Zm00001d028533_P001	Maize	mitochondrion	90.04	90.36
Zm00001d047855_P001	Maize	mitochondrion	87.07	87.07
VIT_18s0001g13570.t01	Wine grape	cytosol	65.24	68.84
KRH33574	Soybean	cytosol	63.82	67.08
KRG90336	Soybean	nucleus	63.82	67.08
CDY46833	Canola	cytosol, mitochondrion, nucleus, plastid	63.58	66.34
Solyc04g081050.1.1	Tomato	cytosol	63.11	66.33
GSMUA_Achr10P...	Banana	plasma membrane	70.82	66.33
Bra015393.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	63.35	65.84
AT1G05150.1	Thale cress	cytosol	62.99	65.72
AT2G32450.1	Thale cress	cytosol	61.92	65.09
PGSC0003DMT400009639	Potato	cytosol	60.74	60.24
CDY55452	Canola	cytosol	13.88	52.7
HORVU2Hr1G067320.4	Barley	cytosol	9.25	8.14
HORVU6Hr1G019280.3	Barley	cytosol	8.54	7.44

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.25.40.10	Gene3D:3.30.60.90	MapMan:35.1	UniProt:A0A287PAL8	InterPro:EF-hand-dom_pair
InterPro:EF_hand_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	GO:GO:0005515	GO:GO:0008270
EnsemblPlantsGene:HORVU4Hr1G061170	EnsemblPlants:HORVU4Hr1G061170.3	InterPro:IPR000433	InterPro:IPR002048	InterPro:IPR011990	InterPro:IPR013026
InterPro:IPR019734	PFAM:PF13432	PFAM:PF14559	PFscan:PS50005	PFscan:PS50222	PFscan:PS50293
PANTHER:PTHR45081	SMART:SM00028	SMART:SM00291	SUPFAM:SSF47473	SUPFAM:SSF48452	SUPFAM:SSF57850
InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI000B47AAFF	InterPro:Znf_ZZ	SEG:seg

Description

No Description!

Coordinates

chrchr4H:+:514071290..514074459

Molecular Weight (calculated)

92001.4 Da

IEP (calculated)

6.589

GRAVY (calculated)

-0.248

Length

843 amino acids

Sequence
(BLAST)

001: AMALSASAAS AGRGARAEKV RRIFERFDAN GDGGLDRAEM AKLVVAVNPR VKFSEDQISA ILDEVFRTYA EFILPGGQGL SLTGLLRTYD DGAGDVDRDF
101: LALSLPAVDS DASSPEIAPG DLAASSSPTS GAAVAASLLD DHLKPLGIGG TGPSSSSRAA VAAPAWATSP SHGIAFDSSW ALLDDLEILV KRLRSKQLRK
201: TSSIDTSGGG SNLDSFSEAG WSREISGSAD SGLAAAPWDE TSRDYLTFVK ELAVLRTRAD ASRSREEAFD NHMVIGRALC EHRLFRDALA SFRRGCELQP
301: TDVRPHFRAG NCLYALGRHA EAKEEFLLAL EAAEAGNSQS ADILPQIHVN LGIAMEAEGM VLGACEHYRE AAILCPSHAR ALKLLGSALF GVGEYRAAEK
401: ALEEAIFLKP DYADAHCDLG SALHAVGDDD RAVEEFQKAI DLKPGHVDAL YNLGGLNMDA GRFVRAAEMY TRVLSIRPNH WRAQLNKAVA LLGQGESEEA
501: KKALKEAFKM TQRVEVYDAI SHLKTLQKKK PKPSKGKHDA QGEEAFVIVE ASKFKRVGRK TTLRQDLANA LDIRAFERTT KLGHCDVELL RKEMNETDVP
601: VSYSGTGIPE KSIRKAALEV ILRRLLSFLK PDTFQGAVKA MNERILSVLD ASGSGRVDLG MFFAIIAPIC SGPVDRRKRV VFDALLWRPA SEGGRGQIRR
701: SDALSYIKLL RAVYIPTHGA SDMLEMHGES DPTMVSYTEF LEMFNDPDWG FGILTTLVKL EDSDHVRHGS HTCSICRYPI IGSRFKETKH SFSLCNRCYS
801: EGKVPSAFKL EEYRFKEYGN ESEALIDKCM CFNLNSKKLE TDA

Best Arabidopsis Sequence Match ( AT1G05150.1 )
(BLAST)

001: MATRGSRSEK VKRIFQQFDG NHDGGLNREE MAALVVAVNP RVKFSDEQIN AILDEVFRTY AEFIDPNKGL TYDGLLRTYD DGAGDVDRDF DALGLELNAD
101: ETTIKGSEAA SSSSITDERA VEAQKKQRTA AWAVSPNHGI VFDETWKLVD DLEILVKRLK SKQEKDGKLK ADNNNNNVDA FSDAGWSREL GPSSEISEKR
201: IYWEESSHDY GVFVKELGVL RSKADGARSR EEAFDGHMAI GRVLYEHQLF KEALVSFKRA CELQPTDVRP HFKAGNCLYV LGKCKESKDE FLLALEAAES
301: GGNQWAYLLP QIYVNLGIAL EGEGMVLSAC EYYREAAILC PTHFRALKLL GSALFGVGEY RAAVKALEEA IYLKPDYADA HCDLASSLHS MGEDERAIEV
401: FQRAIDLKPG HVDALYNLGG LYMDLGRFQR ASEMYTRVLT VWPNHWRAQL NKAVSLLGAG ETEEAKRALK EALKLTNRVE LHDAISHLKH LQKKKGKNNG
501: NGNGGEGPFI VVEPSKFKTV GEKTTLRPDL ATALQIRAFQ RVTRLGKCDV EAVRKEMRDN DVPVSYSGSG GPTKSIRKPN LEEILRRLLS SLKPDTFQGA
601: IKAINEKILA LLDDSGSGRV DMGMFYAVIA PLCGGHSDKR KRVAFDALLW RPVNEGSSQI TKTDAVKYIK LLRAIYIPSH GMSEMLEVHG EEEAESSVTV
701: TFNQFLAMFD DPDWGFGIMS TILKLEANDR NRHGNQVCSV CRYPVIGSRF KEVKARFSLC NQCYGEGKVP PSFKQEEYKF REYESEAEAM KAKCVCFSMQ
801: SHKKAIAT

Arabidopsis Description

Uncharacterized TPR repeat-containing protein At1g05150 [Source:UniProtKB/Swiss-Prot;Acc:O23052]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.