Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015393.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 90.97 | 90.63 |
| CDY46833 | Canola | cytosol, mitochondrion, nucleus, plastid | 90.35 | 90.35 |
| AT2G32450.1 | Thale cress | cytosol | 86.26 | 86.91 |
| VIT_18s0001g13570.t01 | Wine grape | cytosol | 78.47 | 79.35 |
| KRG90336 | Soybean | nucleus | 76.73 | 77.31 |
| KRH33574 | Soybean | cytosol | 76.61 | 77.18 |
| Solyc04g081050.1.1 | Tomato | cytosol | 75.25 | 75.81 |
| PGSC0003DMT400009639 | Potato | cytosol | 71.78 | 68.24 |
| EER95134 | Sorghum | mitochondrion | 65.97 | 63.23 |
| Zm00001d028533_P001 | Maize | mitochondrion | 65.72 | 63.21 |
| Zm00001d047855_P001 | Maize | mitochondrion | 65.72 | 62.99 |
| HORVU4Hr1G061170.3 | Barley | cytosol, mitochondrion, nucleus | 65.72 | 62.99 |
| TraesCS4D01G215500.1 | Wheat | mitochondrion | 65.47 | 62.83 |
| Os03t0263900-01 | Rice | plasma membrane | 65.72 | 62.62 |
| TraesCS4A01G089400.1 | Wheat | mitochondrion | 64.85 | 62.23 |
| TraesCS4B01G215000.1 | Wheat | cytosol, mitochondrion | 64.73 | 62.11 |
| GSMUA_Achr10P... | Banana | plasma membrane | 66.71 | 59.89 |
| Zm00001d044204_P001 | Maize | cytosol, peroxisome, plasma membrane, plastid | 30.82 | 46.2 |
| AT3G11540.1 | Thale cress | cytosol | 8.91 | 7.88 |
| AT3G04240.1 | Thale cress | cytosol | 9.03 | 7.47 |
Protein Annotations
| Gene3D:1.10.238.10 | Gene3D:1.25.40.10 | MapMan:35.1 | EntrezGene:839312 | UniProt:A0A1W6AK06 | ProteinID:AAB71463.1 |
| ProteinID:AEE27795.1 | EMBL:AK229432 | ArrayExpress:AT1G05150 | EnsemblPlantsGene:AT1G05150 | RefSeq:AT1G05150 | TAIR:AT1G05150 |
| RefSeq:AT1G05150-TAIR-G | EnsemblPlants:AT1G05150.1 | TAIR:AT1G05150.1 | Unigene:At.20887 | ncoils:Coil | InterPro:EF-hand-dom_pair |
| InterPro:EF_hand_dom | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005768 | GO:GO:0005794 |
| GO:GO:0005802 | GO:GO:0005886 | GO:GO:0008150 | GO:GO:0009506 | GO:GO:0016020 | GO:GO:0016740 |
| GO:GO:0016757 | GO:GO:0046872 | InterPro:IPR002048 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 |
| EMBL:KY906038 | RefSeq:NP_172007.1 | UniProt:O23052 | PFAM:PF13414 | PFAM:PF13432 | PO:PO:0000005 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PFscan:PS50005 | PFscan:PS50222 | PFscan:PS50293 | PANTHER:PTHR45081 | SMART:SM00028 |
| SUPFAM:SSF47473 | SUPFAM:SSF48452 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | UniParc:UPI00000481C8 |
| SEG:seg | : | : | : | : | : |
Description
Uncharacterized TPR repeat-containing protein At1g05150 [Source:UniProtKB/Swiss-Prot;Acc:O23052]
Coordinates
chr1:-:1484067..1487027
Molecular Weight (calculated)
90174.3 Da
IEP (calculated)
6.731
GRAVY (calculated)
-0.419
Length
808 amino acids
Sequence
(BLAST)
(BLAST)
001: MATRGSRSEK VKRIFQQFDG NHDGGLNREE MAALVVAVNP RVKFSDEQIN AILDEVFRTY AEFIDPNKGL TYDGLLRTYD DGAGDVDRDF DALGLELNAD
101: ETTIKGSEAA SSSSITDERA VEAQKKQRTA AWAVSPNHGI VFDETWKLVD DLEILVKRLK SKQEKDGKLK ADNNNNNVDA FSDAGWSREL GPSSEISEKR
201: IYWEESSHDY GVFVKELGVL RSKADGARSR EEAFDGHMAI GRVLYEHQLF KEALVSFKRA CELQPTDVRP HFKAGNCLYV LGKCKESKDE FLLALEAAES
301: GGNQWAYLLP QIYVNLGIAL EGEGMVLSAC EYYREAAILC PTHFRALKLL GSALFGVGEY RAAVKALEEA IYLKPDYADA HCDLASSLHS MGEDERAIEV
401: FQRAIDLKPG HVDALYNLGG LYMDLGRFQR ASEMYTRVLT VWPNHWRAQL NKAVSLLGAG ETEEAKRALK EALKLTNRVE LHDAISHLKH LQKKKGKNNG
501: NGNGGEGPFI VVEPSKFKTV GEKTTLRPDL ATALQIRAFQ RVTRLGKCDV EAVRKEMRDN DVPVSYSGSG GPTKSIRKPN LEEILRRLLS SLKPDTFQGA
601: IKAINEKILA LLDDSGSGRV DMGMFYAVIA PLCGGHSDKR KRVAFDALLW RPVNEGSSQI TKTDAVKYIK LLRAIYIPSH GMSEMLEVHG EEEAESSVTV
701: TFNQFLAMFD DPDWGFGIMS TILKLEANDR NRHGNQVCSV CRYPVIGSRF KEVKARFSLC NQCYGEGKVP PSFKQEEYKF REYESEAEAM KAKCVCFSMQ
801: SHKKAIAT
101: ETTIKGSEAA SSSSITDERA VEAQKKQRTA AWAVSPNHGI VFDETWKLVD DLEILVKRLK SKQEKDGKLK ADNNNNNVDA FSDAGWSREL GPSSEISEKR
201: IYWEESSHDY GVFVKELGVL RSKADGARSR EEAFDGHMAI GRVLYEHQLF KEALVSFKRA CELQPTDVRP HFKAGNCLYV LGKCKESKDE FLLALEAAES
301: GGNQWAYLLP QIYVNLGIAL EGEGMVLSAC EYYREAAILC PTHFRALKLL GSALFGVGEY RAAVKALEEA IYLKPDYADA HCDLASSLHS MGEDERAIEV
401: FQRAIDLKPG HVDALYNLGG LYMDLGRFQR ASEMYTRVLT VWPNHWRAQL NKAVSLLGAG ETEEAKRALK EALKLTNRVE LHDAISHLKH LQKKKGKNNG
501: NGNGGEGPFI VVEPSKFKTV GEKTTLRPDL ATALQIRAFQ RVTRLGKCDV EAVRKEMRDN DVPVSYSGSG GPTKSIRKPN LEEILRRLLS SLKPDTFQGA
601: IKAINEKILA LLDDSGSGRV DMGMFYAVIA PLCGGHSDKR KRVAFDALLW RPVNEGSSQI TKTDAVKYIK LLRAIYIPSH GMSEMLEVHG EEEAESSVTV
701: TFNQFLAMFD DPDWGFGIMS TILKLEANDR NRHGNQVCSV CRYPVIGSRF KEVKARFSLC NQCYGEGKVP PSFKQEEYKF REYESEAEAM KAKCVCFSMQ
801: SHKKAIAT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.