Factsheet for Zm00001d047855_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95134	Sorghum	mitochondrion	91.7	91.7
Zm00001d028533_P001	Maize	mitochondrion	89.92	90.24
HORVU4Hr1G061170.3	Barley	cytosol, mitochondrion, nucleus	87.07	87.07
TraesCS4D01G215500.1	Wheat	mitochondrion	86.36	86.46
TraesCS4A01G089400.1	Wheat	mitochondrion	86.12	86.22
TraesCS4B01G215000.1	Wheat	cytosol, mitochondrion	85.65	85.75
Os03t0263900-01	Rice	plasma membrane	85.77	85.26
VIT_18s0001g13570.t01	Wine grape	cytosol	64.77	68.34
GSMUA_Achr10P...	Banana	plasma membrane	71.17	66.67
KRH33574	Soybean	cytosol	63.35	66.58
KRG90336	Soybean	nucleus	63.11	66.33
Solyc04g081050.1.1	Tomato	cytosol	62.87	66.08
CDY46833	Canola	cytosol, mitochondrion, nucleus, plastid	63.23	65.97
AT1G05150.1	Thale cress	cytosol	62.99	65.72
Bra015393.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	63.11	65.6
AT2G32450.1	Thale cress	cytosol	62.16	65.34
Zm00001d044204_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	40.81	63.82
PGSC0003DMT400009639	Potato	cytosol	60.74	60.24
CDY55452	Canola	cytosol	13.76	52.25
Zm00001d031337_P001	Maize	cytosol	3.91	26.83
Zm00001d050343_P001	Maize	cytosol	2.37	9.09
Zm00001d031938_P001	Maize	plastid	8.42	7.79
Zm00001d016506_P003	Maize	cytosol	9.37	7.5
Zm00001d003691_P002	Maize	cytosol	1.9	7.44
Zm00001d015678_P001	Maize	extracellular	0.83	4.61

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.25.40.10	MapMan:35.1	ProteinID:AQL07823.1	InterPro:EF-hand-dom_pair	InterPro:EF_hand_dom
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005509	GO:GO:0005515	GO:GO:0008270
GO:GO:0016740	GO:GO:0016757	InterPro:IPR000433	InterPro:IPR002048	InterPro:IPR011990	InterPro:IPR013026
InterPro:IPR019734	UniProt:K7VJP9	PFAM:PF13432	PFAM:PF14559	PFscan:PS50005	PFscan:PS50222
PFscan:PS50293	PANTHER:PTHR45081	SMART:SM00028	SMART:SM00054	SMART:SM00291	SUPFAM:SSF47473
SUPFAM:SSF48452	SUPFAM:SSF57850	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI00022116F9
EnsemblPlantsGene:Zm00001d047855	EnsemblPlants:Zm00001d047855_P001	EnsemblPlants:Zm00001d047855_T001	InterPro:Znf_ZZ	SEG:seg	:

Description

Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC

Coordinates

chr9:-:143527664..143530195

Molecular Weight (calculated)

92102.2 Da

IEP (calculated)

6.482

GRAVY (calculated)

-0.280

Length

843 amino acids

Sequence
(BLAST)

001: MALSASAAST GRGSRAEKVR RIFERFDTNG DGGLDRNEMA ALVVAVNPRV KFSEDQISAI LDEVFRTYAE FILPDGSGLS LSGLLRTYND GAGDVDRDFV
101: ALSLPTVHSD ASSPDIAAGD AAAHSSPPSA SAASLLDDHA MPLGGGGVPT PATASSRATA AAPAWAGSPN HGIAFDSSWG LLDDLEILVK RLRSKQVRKG
201: SIDGSGGAGN SNFDSFSEAG WSREISGAAD SASTSAPWDE TSRDYLTFVK ELAVLRTRAD ASRSREEAFD NHMIIGRALS EHRLFRDALA SFRRACELQP
301: TDVRPHFRAG NCLYGLGRYA EAKEEYLLAL EAAEAGGSQS ADILPQIHVN LGIAMEAEGM VLGACEHYRE AAILCPSHAR ALKLLGSALF GVGEYRAAEK
401: ALEEAIFLKE DYADAHCDLG SALHAVGEDD RAIQEFQTAI DLKPGHVDAL YNLGGLNMDA GRFVRAAEMY TRVLSIRPNH WRAQLNKAVA LLGQGESEEA
501: KKALKEAFKM TQRVEVYDAI SHLKTLQKKK LKPSKGKNDG QGEQTYVIVE ASKFKRVGRK TTLRQDLANA LDIRAFERMT KLGHCDVELL RKEMNETDVP
601: VSYSGTGIPE KSIRKAALEV ILRRLLSFLK PDTFQGAIKA INERILSVLD APGSGRVDLG MFFAIIAPIC SGPVDRRKRI VFDALLWRPA SEGSNGQIRR
701: SDALTYVKLL RAVYIPTHGA SDMLEMHGES DPTMVSYTEF LEMFNDPDWG FGILSTLVKL EESDHIRHGS HTCSICRYPI IGSRFKETKH SFSLCNRCYS
801: EGKVPSAFKL EEYRFKEYGN ESEALIDKCM CFNLHSKKLE TDA

Best Arabidopsis Sequence Match ( AT1G05150.1 )
(BLAST)

001: MATRGSRSEK VKRIFQQFDG NHDGGLNREE MAALVVAVNP RVKFSDEQIN AILDEVFRTY AEFIDPNKGL TYDGLLRTYD DGAGDVDRDF DALGLELNAD
101: ETTIKGSEAA SSSSITDERA VEAQKKQRTA AWAVSPNHGI VFDETWKLVD DLEILVKRLK SKQEKDGKLK ADNNNNNVDA FSDAGWSREL GPSSEISEKR
201: IYWEESSHDY GVFVKELGVL RSKADGARSR EEAFDGHMAI GRVLYEHQLF KEALVSFKRA CELQPTDVRP HFKAGNCLYV LGKCKESKDE FLLALEAAES
301: GGNQWAYLLP QIYVNLGIAL EGEGMVLSAC EYYREAAILC PTHFRALKLL GSALFGVGEY RAAVKALEEA IYLKPDYADA HCDLASSLHS MGEDERAIEV
401: FQRAIDLKPG HVDALYNLGG LYMDLGRFQR ASEMYTRVLT VWPNHWRAQL NKAVSLLGAG ETEEAKRALK EALKLTNRVE LHDAISHLKH LQKKKGKNNG
501: NGNGGEGPFI VVEPSKFKTV GEKTTLRPDL ATALQIRAFQ RVTRLGKCDV EAVRKEMRDN DVPVSYSGSG GPTKSIRKPN LEEILRRLLS SLKPDTFQGA
601: IKAINEKILA LLDDSGSGRV DMGMFYAVIA PLCGGHSDKR KRVAFDALLW RPVNEGSSQI TKTDAVKYIK LLRAIYIPSH GMSEMLEVHG EEEAESSVTV
701: TFNQFLAMFD DPDWGFGIMS TILKLEANDR NRHGNQVCSV CRYPVIGSRF KEVKARFSLC NQCYGEGKVP PSFKQEEYKF REYESEAEAM KAKCVCFSMQ
801: SHKKAIAT

Arabidopsis Description

Uncharacterized TPR repeat-containing protein At1g05150 [Source:UniProtKB/Swiss-Prot;Acc:O23052]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.