Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400009639 | Potato | cytosol | 95.26 | 89.88 |
| VIT_18s0001g13570.t01 | Wine grape | cytosol | 79.68 | 79.97 |
| KRH33574 | Soybean | cytosol | 76.56 | 76.56 |
| CDY46833 | Canola | cytosol, mitochondrion, nucleus, plastid | 76.81 | 76.24 |
| KRG90336 | Soybean | nucleus | 76.18 | 76.18 |
| Bra015393.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 76.68 | 75.83 |
| AT2G32450.1 | Thale cress | cytosol | 75.56 | 75.56 |
| AT1G05150.1 | Thale cress | cytosol | 75.81 | 75.25 |
| Os03t0263900-01 | Rice | plasma membrane | 67.33 | 63.68 |
| EER95134 | Sorghum | mitochondrion | 66.71 | 63.46 |
| Zm00001d028533_P001 | Maize | mitochondrion | 66.46 | 63.45 |
| HORVU4Hr1G061170.3 | Barley | cytosol, mitochondrion, nucleus | 66.33 | 63.11 |
| Zm00001d047855_P001 | Maize | mitochondrion | 66.08 | 62.87 |
| TraesCS4D01G215500.1 | Wheat | mitochondrion | 65.84 | 62.71 |
| TraesCS4A01G089400.1 | Wheat | mitochondrion | 65.71 | 62.59 |
| TraesCS4B01G215000.1 | Wheat | cytosol, mitochondrion | 65.46 | 62.35 |
| GSMUA_Achr10P... | Banana | plasma membrane | 67.33 | 60.0 |
| CDY55452 | Canola | cytosol | 15.96 | 57.66 |
| Zm00001d044204_P001 | Maize | cytosol, peroxisome, plasma membrane, plastid | 30.8 | 45.83 |
| Solyc09g097830.2.1 | Tomato | cytosol | 10.47 | 8.53 |
| Solyc09g010180.2.1 | Tomato | extracellular | 8.73 | 7.52 |
Protein Annotations
| Gene3D:1.10.238.10 | Gene3D:1.25.40.10 | MapMan:35.1 | InterPro:EF-hand-dom_pair | InterPro:EF_hand_dom | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005515 | InterPro:IPR002048 | InterPro:IPR011990 | InterPro:IPR013026 |
| InterPro:IPR019734 | UniProt:K4BVI4 | PFAM:PF13414 | PFAM:PF13432 | PFscan:PS50005 | PFscan:PS50222 |
| PFscan:PS50293 | PANTHER:PTHR45081 | SMART:SM00028 | SUPFAM:SSF47473 | SUPFAM:SSF48452 | EnsemblPlantsGene:Solyc04g081050.1 |
| EnsemblPlants:Solyc04g081050.1.1 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | UniParc:UPI0002765C96 | SEG:seg |
Description
No Description!
Coordinates
chr4:-:65099770..65102178
Molecular Weight (calculated)
89598.6 Da
IEP (calculated)
6.484
GRAVY (calculated)
-0.414
Length
802 amino acids
Sequence
(BLAST)
(BLAST)
001: MATRGSRSEK VKRIFQQFDG NHDGGLNREE MAALVVAVNP RVKFSEEQIN AILDEVFRTY SEFIDGEKGL TYEGLLRTYD DGAGDVDRDF DALGLELKPE
101: DNAGTSIAAE EASSSSIADE RVMEPHKKQR TAAWAASPNH GIVFDDTWKL VDDLEILIKR LKSKQSKDGK LKNDNFDVYS EGWSRELGPS TEITDKRVNW
201: EETGHDYAVF VKELGVLRSR ADGSRSREEA FDGHMAIGRV LYDQHLFKEA LVSFKRACEL QPADVRPHFR AGNCLYVLGR HSESKEEFLL ALEAAEAGGS
301: QWAYLLPQIH VNLGIALEGE GMVISACEHY REAAILCPTH FRALKLLGSA LFGVGEYKAA VKALEEAIYM KSDYADAHCD LASALHAMGD DDNAIKEFQR
401: AIDLKPGHVD ALYNLGGLYM DMGRYQRASE MYTRVLSVWP NHWRAQLNKA VALLGAGETE EAKKALKEAL KMTNRVELHD AVAHLKQLQK RKLKGNGGGN
501: GEEAFIIVEP SKFKSVGEKT TLRADLSTAL DIRSFQRITR LNRCDVDQIK KEMNETVVPM SYSGGVPEKS IRKASLEEIL HRLLKFLKPE TFIGAVKAIN
601: QKVLSVLDES ESGRLDLGMF FAVLAPVCGG SPDKRKRVAY EALLWRPVNE GSNQIRKTDA QRYIKLLRAI YIPSQGASEM LEIHGEMDTS LVSLAEFTAM
701: FDDPDWGFGI MSTLLKLETG DRNRHGSHVC ATCRYPIIGS RFKEIKSHFS LCSQCYSEGK VPPTSKQEEY RFKEYASEAE AVKDKCMWFG IHSKSSSSPT
801: AS
101: DNAGTSIAAE EASSSSIADE RVMEPHKKQR TAAWAASPNH GIVFDDTWKL VDDLEILIKR LKSKQSKDGK LKNDNFDVYS EGWSRELGPS TEITDKRVNW
201: EETGHDYAVF VKELGVLRSR ADGSRSREEA FDGHMAIGRV LYDQHLFKEA LVSFKRACEL QPADVRPHFR AGNCLYVLGR HSESKEEFLL ALEAAEAGGS
301: QWAYLLPQIH VNLGIALEGE GMVISACEHY REAAILCPTH FRALKLLGSA LFGVGEYKAA VKALEEAIYM KSDYADAHCD LASALHAMGD DDNAIKEFQR
401: AIDLKPGHVD ALYNLGGLYM DMGRYQRASE MYTRVLSVWP NHWRAQLNKA VALLGAGETE EAKKALKEAL KMTNRVELHD AVAHLKQLQK RKLKGNGGGN
501: GEEAFIIVEP SKFKSVGEKT TLRADLSTAL DIRSFQRITR LNRCDVDQIK KEMNETVVPM SYSGGVPEKS IRKASLEEIL HRLLKFLKPE TFIGAVKAIN
601: QKVLSVLDES ESGRLDLGMF FAVLAPVCGG SPDKRKRVAY EALLWRPVNE GSNQIRKTDA QRYIKLLRAI YIPSQGASEM LEIHGEMDTS LVSLAEFTAM
701: FDDPDWGFGI MSTLLKLETG DRNRHGSHVC ATCRYPIIGS RFKEIKSHFS LCSQCYSEGK VPPTSKQEEY RFKEYASEAE AVKDKCMWFG IHSKSSSSPT
801: AS
001: MATRGSRSEK VKRIFQQFDG NHDGGLNREE MAALVVAVNP RVKFSDEQIN AILDEVFRTY AEFIDPNKGL TYDGLLRTYD DGAGDVDRDF DALGLELNAD
101: ETTIKGSEAA SSSSITDERA VEAQKKQRTA AWAVSPNHGI VFDETWKLVD DLEILVKRLK SKQEKDGKLK ADNNNNNVDA FSDAGWSREL GPSSEISEKR
201: IYWEESSHDY GVFVKELGVL RSKADGARSR EEAFDGHMAI GRVLYEHQLF KEALVSFKRA CELQPTDVRP HFKAGNCLYV LGKCKESKDE FLLALEAAES
301: GGNQWAYLLP QIYVNLGIAL EGEGMVLSAC EYYREAAILC PTHFRALKLL GSALFGVGEY RAAVKALEEA IYLKPDYADA HCDLASSLHS MGEDERAIEV
401: FQRAIDLKPG HVDALYNLGG LYMDLGRFQR ASEMYTRVLT VWPNHWRAQL NKAVSLLGAG ETEEAKRALK EALKLTNRVE LHDAISHLKH LQKKKGKNNG
501: NGNGGEGPFI VVEPSKFKTV GEKTTLRPDL ATALQIRAFQ RVTRLGKCDV EAVRKEMRDN DVPVSYSGSG GPTKSIRKPN LEEILRRLLS SLKPDTFQGA
601: IKAINEKILA LLDDSGSGRV DMGMFYAVIA PLCGGHSDKR KRVAFDALLW RPVNEGSSQI TKTDAVKYIK LLRAIYIPSH GMSEMLEVHG EEEAESSVTV
701: TFNQFLAMFD DPDWGFGIMS TILKLEANDR NRHGNQVCSV CRYPVIGSRF KEVKARFSLC NQCYGEGKVP PSFKQEEYKF REYESEAEAM KAKCVCFSMQ
801: SHKKAIAT
101: ETTIKGSEAA SSSSITDERA VEAQKKQRTA AWAVSPNHGI VFDETWKLVD DLEILVKRLK SKQEKDGKLK ADNNNNNVDA FSDAGWSREL GPSSEISEKR
201: IYWEESSHDY GVFVKELGVL RSKADGARSR EEAFDGHMAI GRVLYEHQLF KEALVSFKRA CELQPTDVRP HFKAGNCLYV LGKCKESKDE FLLALEAAES
301: GGNQWAYLLP QIYVNLGIAL EGEGMVLSAC EYYREAAILC PTHFRALKLL GSALFGVGEY RAAVKALEEA IYLKPDYADA HCDLASSLHS MGEDERAIEV
401: FQRAIDLKPG HVDALYNLGG LYMDLGRFQR ASEMYTRVLT VWPNHWRAQL NKAVSLLGAG ETEEAKRALK EALKLTNRVE LHDAISHLKH LQKKKGKNNG
501: NGNGGEGPFI VVEPSKFKTV GEKTTLRPDL ATALQIRAFQ RVTRLGKCDV EAVRKEMRDN DVPVSYSGSG GPTKSIRKPN LEEILRRLLS SLKPDTFQGA
601: IKAINEKILA LLDDSGSGRV DMGMFYAVIA PLCGGHSDKR KRVAFDALLW RPVNEGSSQI TKTDAVKYIK LLRAIYIPSH GMSEMLEVHG EEEAESSVTV
701: TFNQFLAMFD DPDWGFGIMS TILKLEANDR NRHGNQVCSV CRYPVIGSRF KEVKARFSLC NQCYGEGKVP PSFKQEEYKF REYESEAEAM KAKCVCFSMQ
801: SHKKAIAT
Arabidopsis Description
Uncharacterized TPR repeat-containing protein At1g05150 [Source:UniProtKB/Swiss-Prot;Acc:O23052]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.