Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G215000.1 | Wheat | cytosol, mitochondrion | 98.46 | 98.46 |
| TraesCS4A01G089400.1 | Wheat | mitochondrion | 98.34 | 98.34 |
| HORVU4Hr1G061170.3 | Barley | cytosol, mitochondrion, nucleus | 97.98 | 97.86 |
| Os03t0263900-01 | Rice | plasma membrane | 90.38 | 89.74 |
| EER95134 | Sorghum | mitochondrion | 89.79 | 89.68 |
| Zm00001d028533_P001 | Maize | mitochondrion | 89.07 | 89.29 |
| Zm00001d047855_P001 | Maize | mitochondrion | 86.46 | 86.36 |
| VIT_18s0001g13570.t01 | Wine grape | cytosol | 65.08 | 68.59 |
| KRG90336 | Soybean | nucleus | 63.54 | 66.71 |
| KRH33574 | Soybean | cytosol | 63.54 | 66.71 |
| GSMUA_Achr10P... | Banana | plasma membrane | 70.55 | 66.0 |
| CDY46833 | Canola | cytosol, mitochondrion, nucleus, plastid | 63.3 | 65.97 |
| Solyc04g081050.1.1 | Tomato | cytosol | 62.71 | 65.84 |
| Bra015393.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 63.06 | 65.47 |
| AT1G05150.1 | Thale cress | cytosol | 62.83 | 65.47 |
| AT2G32450.1 | Thale cress | cytosol | 61.76 | 64.84 |
| PGSC0003DMT400009639 | Potato | cytosol | 60.33 | 59.76 |
| CDY55452 | Canola | cytosol | 13.78 | 52.25 |
| TraesCS2D01G274800.1 | Wheat | endoplasmic reticulum | 9.14 | 7.81 |
| TraesCS6D01G095600.1 | Wheat | cytosol | 8.08 | 7.23 |
Protein Annotations
| Gene3D:1.10.238.10 | Gene3D:1.25.40.10 | MapMan:35.1 | InterPro:EF-hand-dom_pair | InterPro:EF_hand_dom | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005515 | InterPro:IPR002048 | InterPro:IPR011990 | InterPro:IPR013026 |
| InterPro:IPR019734 | PFAM:PF13432 | PFAM:PF14559 | PFscan:PS50005 | PFscan:PS50222 | PFscan:PS50293 |
| PANTHER:PTHR45081 | SMART:SM00028 | SUPFAM:SSF47473 | SUPFAM:SSF48452 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf |
| InterPro:TPR_repeat | EnsemblPlantsGene:TraesCS4D01G215500 | EnsemblPlants:TraesCS4D01G215500.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr4D:-:369120102..369122896
Molecular Weight (calculated)
91835.1 Da
IEP (calculated)
6.516
GRAVY (calculated)
-0.248
Length
842 amino acids
Sequence
(BLAST)
(BLAST)
001: MALSASAASA GRGARAEKVR RIFERFDANG DGGLDRAEMA KLVVAVNPRV KFSDDQISAI LDEVFRTYAE FILPGGQGLS LTGLLRTYDD GAGDVDRDFL
101: ALSLPAVDSD ASSPEIGPGD AAASPSPTSG AAVAASLLDD HLRPLGIGGT GPSSSSRAAV AAPAWATSPS HGIAFDSSWA LLDDLEILVK RLRSKQLRKT
201: SSIDTSGGGS NLDSFSEAGW SREISASADS GLASAPWDET SRDYLTFVKE LAVLRTRADA SRSREEAFDN HMVIGRALSE HRLFRDALAS FRRGCELQPT
301: DVRPHFRAGN CLYALGRHAE AKEEFLLALE AAEAGNSQSA DILPQIHVNL GIAMEAEGMV LGACEHYREA AILCPSHARA LKLLGSALFG VGEYRAAEKA
401: LEEAIFLKPD YADAHCDLGS ALHAVGDDDR AVQEFQKAID LKPGHVDALY NLGGLNMDAC RFVRAAEMYT RVLSIRPNHW RAQLNKAVAL LGQGESEEAK
501: KALKEAFKMT QRVEVYDAIS HLKTLQKKKP KPSKGKHDAQ GEEAFVIVEA SKFKRVGSKT TLRQDLANAL DIRAFERTTK LGHCDAELLR KEMNETDVPV
601: SYSGTGIPEK SIRKAALEVI LRRLLSFLKP DTFQGAVKAM NERILSVLDA SGSGRVDLGM FFAIIAPICS GPVDRRKRVV FDALLWRPAS EGGRGQIRRS
701: DALSYIKLLR AVYIPTHGAS DMLEMHGESD PTMVSYTEFL EMFNDPDWGF GILTTLVKLE DSDHVRHGSH TCSVCRYPII GSRFMETKHS FSLCNRCYSE
801: GKVPSAFKLE EYRFKEYSNE SEALVDKCMC FNLNSKKLEA DA
101: ALSLPAVDSD ASSPEIGPGD AAASPSPTSG AAVAASLLDD HLRPLGIGGT GPSSSSRAAV AAPAWATSPS HGIAFDSSWA LLDDLEILVK RLRSKQLRKT
201: SSIDTSGGGS NLDSFSEAGW SREISASADS GLASAPWDET SRDYLTFVKE LAVLRTRADA SRSREEAFDN HMVIGRALSE HRLFRDALAS FRRGCELQPT
301: DVRPHFRAGN CLYALGRHAE AKEEFLLALE AAEAGNSQSA DILPQIHVNL GIAMEAEGMV LGACEHYREA AILCPSHARA LKLLGSALFG VGEYRAAEKA
401: LEEAIFLKPD YADAHCDLGS ALHAVGDDDR AVQEFQKAID LKPGHVDALY NLGGLNMDAC RFVRAAEMYT RVLSIRPNHW RAQLNKAVAL LGQGESEEAK
501: KALKEAFKMT QRVEVYDAIS HLKTLQKKKP KPSKGKHDAQ GEEAFVIVEA SKFKRVGSKT TLRQDLANAL DIRAFERTTK LGHCDAELLR KEMNETDVPV
601: SYSGTGIPEK SIRKAALEVI LRRLLSFLKP DTFQGAVKAM NERILSVLDA SGSGRVDLGM FFAIIAPICS GPVDRRKRVV FDALLWRPAS EGGRGQIRRS
701: DALSYIKLLR AVYIPTHGAS DMLEMHGESD PTMVSYTEFL EMFNDPDWGF GILTTLVKLE DSDHVRHGSH TCSVCRYPII GSRFMETKHS FSLCNRCYSE
801: GKVPSAFKLE EYRFKEYSNE SEALVDKCMC FNLNSKKLEA DA
001: MATRGSRSEK VKRIFQQFDG NHDGGLNREE MAALVVAVNP RVKFSDEQIN AILDEVFRTY AEFIDPNKGL TYDGLLRTYD DGAGDVDRDF DALGLELNAD
101: ETTIKGSEAA SSSSITDERA VEAQKKQRTA AWAVSPNHGI VFDETWKLVD DLEILVKRLK SKQEKDGKLK ADNNNNNVDA FSDAGWSREL GPSSEISEKR
201: IYWEESSHDY GVFVKELGVL RSKADGARSR EEAFDGHMAI GRVLYEHQLF KEALVSFKRA CELQPTDVRP HFKAGNCLYV LGKCKESKDE FLLALEAAES
301: GGNQWAYLLP QIYVNLGIAL EGEGMVLSAC EYYREAAILC PTHFRALKLL GSALFGVGEY RAAVKALEEA IYLKPDYADA HCDLASSLHS MGEDERAIEV
401: FQRAIDLKPG HVDALYNLGG LYMDLGRFQR ASEMYTRVLT VWPNHWRAQL NKAVSLLGAG ETEEAKRALK EALKLTNRVE LHDAISHLKH LQKKKGKNNG
501: NGNGGEGPFI VVEPSKFKTV GEKTTLRPDL ATALQIRAFQ RVTRLGKCDV EAVRKEMRDN DVPVSYSGSG GPTKSIRKPN LEEILRRLLS SLKPDTFQGA
601: IKAINEKILA LLDDSGSGRV DMGMFYAVIA PLCGGHSDKR KRVAFDALLW RPVNEGSSQI TKTDAVKYIK LLRAIYIPSH GMSEMLEVHG EEEAESSVTV
701: TFNQFLAMFD DPDWGFGIMS TILKLEANDR NRHGNQVCSV CRYPVIGSRF KEVKARFSLC NQCYGEGKVP PSFKQEEYKF REYESEAEAM KAKCVCFSMQ
801: SHKKAIAT
101: ETTIKGSEAA SSSSITDERA VEAQKKQRTA AWAVSPNHGI VFDETWKLVD DLEILVKRLK SKQEKDGKLK ADNNNNNVDA FSDAGWSREL GPSSEISEKR
201: IYWEESSHDY GVFVKELGVL RSKADGARSR EEAFDGHMAI GRVLYEHQLF KEALVSFKRA CELQPTDVRP HFKAGNCLYV LGKCKESKDE FLLALEAAES
301: GGNQWAYLLP QIYVNLGIAL EGEGMVLSAC EYYREAAILC PTHFRALKLL GSALFGVGEY RAAVKALEEA IYLKPDYADA HCDLASSLHS MGEDERAIEV
401: FQRAIDLKPG HVDALYNLGG LYMDLGRFQR ASEMYTRVLT VWPNHWRAQL NKAVSLLGAG ETEEAKRALK EALKLTNRVE LHDAISHLKH LQKKKGKNNG
501: NGNGGEGPFI VVEPSKFKTV GEKTTLRPDL ATALQIRAFQ RVTRLGKCDV EAVRKEMRDN DVPVSYSGSG GPTKSIRKPN LEEILRRLLS SLKPDTFQGA
601: IKAINEKILA LLDDSGSGRV DMGMFYAVIA PLCGGHSDKR KRVAFDALLW RPVNEGSSQI TKTDAVKYIK LLRAIYIPSH GMSEMLEVHG EEEAESSVTV
701: TFNQFLAMFD DPDWGFGIMS TILKLEANDR NRHGNQVCSV CRYPVIGSRF KEVKARFSLC NQCYGEGKVP PSFKQEEYKF REYESEAEAM KAKCVCFSMQ
801: SHKKAIAT
Arabidopsis Description
Uncharacterized TPR repeat-containing protein At1g05150 [Source:UniProtKB/Swiss-Prot;Acc:O23052]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.