Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G05150.1 | Thale cress | cytosol | 86.91 | 86.26 |
| VIT_18s0001g13570.t01 | Wine grape | cytosol | 76.56 | 76.85 |
| KRH33574 | Soybean | cytosol | 76.56 | 76.56 |
| KRG90336 | Soybean | nucleus | 75.81 | 75.81 |
| Solyc04g081050.1.1 | Tomato | cytosol | 75.56 | 75.56 |
| CDY55452 | Canola | cytosol | 18.95 | 68.47 |
| PGSC0003DMT400009639 | Potato | cytosol | 72.07 | 68.0 |
| EER95134 | Sorghum | mitochondrion | 65.59 | 62.4 |
| Zm00001d028533_P001 | Maize | mitochondrion | 65.21 | 62.26 |
| Zm00001d047855_P001 | Maize | mitochondrion | 65.34 | 62.16 |
| HORVU4Hr1G061170.3 | Barley | cytosol, mitochondrion, nucleus | 65.09 | 61.92 |
| TraesCS4D01G215500.1 | Wheat | mitochondrion | 64.84 | 61.76 |
| Os03t0263900-01 | Rice | plasma membrane | 64.96 | 61.44 |
| TraesCS4A01G089400.1 | Wheat | mitochondrion | 64.21 | 61.16 |
| TraesCS4B01G215000.1 | Wheat | cytosol, mitochondrion | 63.97 | 60.93 |
| GSMUA_Achr10P... | Banana | plasma membrane | 65.84 | 58.67 |
| Zm00001d044204_P001 | Maize | cytosol, peroxisome, plasma membrane, plastid | 31.05 | 46.2 |
| AT3G04240.1 | Thale cress | cytosol | 9.1 | 7.47 |
| AT3G11540.1 | Thale cress | cytosol | 8.23 | 7.22 |
Protein Annotations
| Gene3D:1.10.238.10 | Gene3D:1.25.40.10 | MapMan:35.1 | EntrezGene:817806 | UniProt:A0A1W6AK31 | ProteinID:AAM15073.1 |
| ProteinID:AEC08687.1 | ArrayExpress:AT2G32450 | EnsemblPlantsGene:AT2G32450 | RefSeq:AT2G32450 | TAIR:AT2G32450 | RefSeq:AT2G32450-TAIR-G |
| EnsemblPlants:AT2G32450.1 | TAIR:AT2G32450.1 | Unigene:At.38072 | EMBL:BT004231 | EMBL:BT005684 | InterPro:EF-hand-dom_pair |
| InterPro:EF_hand_dom | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 | GO:GO:0016740 | GO:GO:0016757 |
| InterPro:IPR002048 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 | EMBL:KY906059 | RefSeq:NP_180804.1 |
| PFAM:PF13414 | PFAM:PF13432 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50005 | PFscan:PS50222 |
| PFscan:PS50293 | PANTHER:PTHR45081 | UniProt:Q8S8L9 | SMART:SM00028 | SUPFAM:SSF47473 | SUPFAM:SSF48452 |
| InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | UniParc:UPI000000C2F7 | SEG:seg | : |
Description
Uncharacterized TPR repeat-containing protein At2g32450 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8L9]
Coordinates
chr2:+:13778320..13781398
Molecular Weight (calculated)
90233.5 Da
IEP (calculated)
6.722
GRAVY (calculated)
-0.412
Length
802 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTRGSRSEK VKRIFQQFDG NLDGGLSREE MSALVVAVNP RVKFSDEQIS AILDEVFRTY AEFIDGDKGL TFDGLLRTYD DGAGDVDRDF DALGIEFNEE
101: TKGASEASSS SITDERAVEA QKQQRTAAWA VSPNHGIVFD ETWKLVDDLE ILVKRLKSKQ EKDGKLKVDN NNVDAFSEAG WSRELGPSSD ISDKRIYWEE
201: SSHDYGVFVK ELGVLRSKAD GARSREEAFD GHMAIGKVLY EHQLFKEALV SFKRACELQP TDVRPHFKAG NCLYVLGKYK ESKDEFLLAL EAAESGGNQW
301: AYLLPQIYVN LGISLEGEGM VLSACEYYRE AAILCPTHYR ALKLLGSALF GVGEYRAAVK ALEEAIYLKP DYADAHCDLA SSLHAMGEDE RAIEVFQRAI
401: DLKPGHVDAL YNLGGLYMDL GRFQRASEMY TRVLAVWPNH WRAQLNKAVS LLGAGETEEA KRALKEALKM TNRVELHDAV SHLKQLQKKK KVKKGNSANE
501: EGPFIVVESS KFKTVGEKTT LRPDLAIALQ VRAFQRVTRL WKCDVEALRR EMRDNNVPVS YSGNGIPTKS IRRPNLEEIL RRLLNVLKPE TFQGAIKAIN
601: EKILSVLDDS GSGRVDLGMF YAVIAPLCGG HPDKRKRVAF DALLWKPVNE GSSQITKMEA VKYIKLLRAI YIPSQGMSEM LEVHGESDDT STVTFNQFLE
701: MYDDSEWGFG IMSTVFKLET RDRNRHGNQV CSVCRYPIIG SRFKEVKTGF SLCNQCYSEG KIPPTFKQQE EYKFREYASE VEAMKAKCVC FSMQSHKKTI
801: AT
101: TKGASEASSS SITDERAVEA QKQQRTAAWA VSPNHGIVFD ETWKLVDDLE ILVKRLKSKQ EKDGKLKVDN NNVDAFSEAG WSRELGPSSD ISDKRIYWEE
201: SSHDYGVFVK ELGVLRSKAD GARSREEAFD GHMAIGKVLY EHQLFKEALV SFKRACELQP TDVRPHFKAG NCLYVLGKYK ESKDEFLLAL EAAESGGNQW
301: AYLLPQIYVN LGISLEGEGM VLSACEYYRE AAILCPTHYR ALKLLGSALF GVGEYRAAVK ALEEAIYLKP DYADAHCDLA SSLHAMGEDE RAIEVFQRAI
401: DLKPGHVDAL YNLGGLYMDL GRFQRASEMY TRVLAVWPNH WRAQLNKAVS LLGAGETEEA KRALKEALKM TNRVELHDAV SHLKQLQKKK KVKKGNSANE
501: EGPFIVVESS KFKTVGEKTT LRPDLAIALQ VRAFQRVTRL WKCDVEALRR EMRDNNVPVS YSGNGIPTKS IRRPNLEEIL RRLLNVLKPE TFQGAIKAIN
601: EKILSVLDDS GSGRVDLGMF YAVIAPLCGG HPDKRKRVAF DALLWKPVNE GSSQITKMEA VKYIKLLRAI YIPSQGMSEM LEVHGESDDT STVTFNQFLE
701: MYDDSEWGFG IMSTVFKLET RDRNRHGNQV CSVCRYPIIG SRFKEVKTGF SLCNQCYSEG KIPPTFKQQE EYKFREYASE VEAMKAKCVC FSMQSHKKTI
801: AT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.