CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG96211	Soybean	plastid	94.67	89.6
KRH72262	Soybean	cytosol	85.53	84.7
KRH32780	Soybean	cytosol	84.77	80.89
VIT_08s0007g02910.t01	Wine grape	cytosol	80.2	80.63
PGSC0003DMT400023083	Potato	cytosol	79.33	78.3
Solyc09g010180.2.1	Tomato	extracellular	79.22	78.2
GSMUA_Achr3P22610_001	Banana	cytosol	74.54	74.62
EES14080	Sorghum	cytosol	73.67	73.99
Zm00001d031938_P001	Maize	plastid	73.23	73.87
KRH38138	Soybean	cytosol	14.91	72.49
Os08t0559300-01	Rice	cytosol	72.58	71.95
TraesCS6B01G136300.1	Wheat	cytosol, plastid	73.01	71.54
TraesCS6D01G095600.1	Wheat	cytosol	73.12	71.41
TraesCS6A01G107700.1	Wheat	cytosol	73.01	71.23
HORVU6Hr1G019280.3	Barley	cytosol	73.45	69.73
KRH34180	Soybean	cytosol	25.03	23.28
KRG92600	Soybean	cytosol	25.03	23.28
KRH38067	Soybean	cytosol	1.85	21.25
KRH33574	Soybean	cytosol	7.51	8.6
KRG90336	Soybean	nucleus	7.51	8.6

Protein Annotations

KEGG:00514+2.4.1.255	Gene3D:1.25.40.10	EntrezGene:100785784	MapMan:18.1.2.2.1	Gene3D:3.40.50.11380	Gene3D:3.40.50.2000
EMBL:ACUP02002094	EnsemblPlantsGene:GLYMA_03G198100	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR011990
InterPro:IPR013026	InterPro:IPR019734	UniProt:K7KG28	EnsemblPlants:KRH67954	ProteinID:KRH67954	ProteinID:KRH67954.1
ProteinID:KRH67955.1	InterPro:OGT/SEC/SPY_C	PFAM:PF00515	PFAM:PF13374	PFAM:PF13432	PFAM:PF13844
PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR44835	SMART:SM00028	SMART:SM00671	SUPFAM:SSF48452
InterPro:Sel1-like	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_1	InterPro:TPR_repeat	UniParc:UPI0002339797
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:40745510..40759191

Molecular Weight (calculated)

102187.0 Da

IEP (calculated)

5.651

GRAVY (calculated)

-0.247

Length

919 amino acids

Sequence
(BLAST)

001: MAGADINSDG NGSERELAGN SYNGFAEAPE ASVSASGCEG NDSVSYANVL RSRNKFVDAL SIYERVLESD GANVEALIGK GICLQMQNKG RLAYESFSEA
101: IKVDPQNACA LTHCGILHKD EGRLVEAAES YQKALQVDPS YKAAAECLAI VLTDIGTNIK LAGNTQDGIQ KYFEALKVDP HYAPAYYNLG VVYSEMMQYD
201: TALSFYEKAA SERPIYAEAY CNMGVIFKNR GDLESAITCY ERCLTVSPNF EIAKNNMAIA LTDLGTKVKL EGDINQGVTL YKKALYYNWH YADAMYNLGV
301: AYGEMLKFDM AIVFYELAFH FNPHCAEACN NLGVIYKDRE NLDKAVECYQ LALSIKPNFS QSLNNLGVVY TVQGKVDAAA SMIEKAIIAN PTYAEAYNNL
401: GVLYRDAGDI ARAINAYEQC LKIDPDSRNA GQNRLLAMNY IEEGHDDTLF EVHRDWGRRF MRLYPQYTSW DNSKDPERPL VIGYVSPDYF THSVSYFIET
501: PLVYHDYSNF KVIVYSAVVK ADSKTIRFRE KVLNKGGIWK DIYGIDEKRV ANMVREDQVD ILVELTGHTA SNKLGMMACR PAPIQVTWIG YPNTTGLPTI
601: DYRITDSLAD PPETKQKHVE ELVRLPECFL CYTPSPEAGP ICPTPALSNG FVTFGSFNNL AKITPKVLQV WARILCAIPN SRLVVKCKPF CSDSVRQRFL
701: STLEQLGLEP LRVDLLPLIL LNHDHMQAYS LMDISLDTFP YAGTTTTCES LYMGVPCVTM AGSVHAHNVG VSLLSKVGLE HLIARNEDEY VELAQQLASD
801: ISALQNLRMS LRNLMSKSPL CDGAKFILGL ESTYRKMWHR YCRGDVPSLK RLELLQEVAT GDLSNKNSEP TRIANSREDS PGSVKANGYN TIPASKLNIH
901: TREENDGSSN HSSKQGKMS

Best Arabidopsis Sequence Match ( AT3G11540.1 )
(BLAST)

001: MVGLEDDTER ERSPVVENGF SNGSRSSSSS AGVLSPSRKV TQGNDTLSYA NILRARNKFA DALALYEAML EKDSKNVEAH IGKGICLQTQ NKGNLAFDCF
101: SEAIRLDPHN ACALTHCGIL HKEEGRLVEA AESYQKALMA DASYKPAAEC LAIVLTDLGT SLKLAGNTQE GIQKYYEALK IDPHYAPAYY NLGVVYSEMM
201: QYDNALSCYE KAALERPMYA EAYCNMGVIY KNRGDLEMAI TCYERCLAVS PNFEIAKNNM AIALTDLGTK VKLEGDVTQG VAYYKKALYY NWHYADAMYN
301: LGVAYGEMLK FDMAIVFYEL AFHFNPHCAE ACNNLGVLYK DRDNLDKAVE CYQMALSIKP NFAQSLNNLG VVYTVQGKMD AAASMIEKAI LANPTYAEAF
401: NNLGVLYRDA GNITMAIDAY EECLKIDPDS RNAGQNRLLA MNYINEGLDD KLFEAHRDWG WRFTRLHPQY TSWDNLKDPE RPITIGYISP DFFTHSVSYF
501: IEAPLTHHDY TKYKVVVYSA VVKADAKTYR FRDKVLKKGG VWKDIYGIDE KKIASMVRED KIDILVELTG HTANNKLGTM ACRPAPVQVT WIGYPNTTGL
601: PTVDYRITDS LADPPDTKQK QVEELVRLPD CFLCYTPSPE AGPVCPTPAL SNGFVTFGSF NNLAKITPKV LQVWARILCA VPNSRLVVKC KPFCCDSIRQ
701: RFLTTLEQLG LESKRVDLLP LILFNHDHMQ AYSLMDISLD TFPYAGTTTT CESLYMGVPC VTMAGSVHAH NVGVSLLTKV GLGHLVAKNE DEYVQLSVDL
801: ASDVTALSKL RMSLRDLMAG SPVCNGPSFA VGLESAYRNM WKKYCKGEVP SLRRMEMLQK EVHDDPLISK DLGPSRVSVT GEATPSLKAN GSAPVPSSLP
901: TQSPQLSKRM DSTS

Arabidopsis Description

SPYProbable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY [Source:UniProtKB/Swiss-Prot;Acc:Q96301]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.