Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| KXG31676 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G11540.1 | KXG31676 | AT1G22770.1 | 15155885 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d031938_P001 | Maize | plastid | 94.32 | 94.73 |
| Os08t0559300-01 | Rice | cytosol | 84.04 | 82.96 |
| TraesCS6B01G136300.1 | Wheat | cytosol, plastid | 82.95 | 80.92 |
| TraesCS6D01G095600.1 | Wheat | cytosol | 82.95 | 80.66 |
| TraesCS6A01G107700.1 | Wheat | cytosol | 82.95 | 80.57 |
| HORVU6Hr1G019280.3 | Barley | cytosol | 81.75 | 77.27 |
| GSMUA_Achr3P22610_001 | Banana | cytosol | 76.28 | 76.03 |
| VIT_08s0007g02910.t01 | Wine grape | cytosol | 74.97 | 75.05 |
| AT3G11540.1 | Thale cress | cytosol | 74.32 | 74.4 |
| CDY08515 | Canola | cytosol | 73.77 | 74.34 |
| Bra034832.1-P | Field mustard | cytosol | 74.21 | 74.29 |
| PGSC0003DMT400023083 | Potato | cytosol | 75.52 | 74.22 |
| KRH72262 | Soybean | cytosol | 75.19 | 74.14 |
| CDY01033 | Canola | cytosol | 73.99 | 74.07 |
| Solyc09g010180.2.1 | Tomato | extracellular | 75.3 | 74.01 |
| KRH67954 | Soybean | cytosol | 73.99 | 73.67 |
| KRH32780 | Soybean | cytosol | 74.86 | 71.13 |
| KRG96211 | Soybean | plastid | 73.66 | 69.41 |
| KRH38138 | Soybean | cytosol | 14.21 | 68.78 |
| CDX73870 | Canola | cytosol | 64.92 | 66.0 |
| Bra001408.1-P | Field mustard | cytosol | 64.92 | 66.0 |
| CDY00739 | Canola | cytosol | 72.46 | 62.02 |
| OQU84950 | Sorghum | cytosol | 25.36 | 22.95 |
| EER95134 | Sorghum | mitochondrion | 7.76 | 8.42 |
Protein Annotations
| KEGG:00514+2.4.1.255 | Gene3D:1.25.40.10 | MapMan:18.1.2.2.1 | Gene3D:3.40.50.11380 | Gene3D:3.40.50.2000 | EntrezGene:8057815 |
| UniProt:C5YN59 | EnsemblPlants:EES14080 | ProteinID:EES14080 | ProteinID:EES14080.2 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009719 |
| GO:GO:0009736 | GO:GO:0009938 | GO:GO:0009987 | GO:GO:2000377 | InterPro:IPR011990 | InterPro:IPR013026 |
| InterPro:IPR019734 | InterPro:OGT/SEC/SPY_C | PFAM:PF00515 | PFAM:PF13374 | PFAM:PF13432 | PFAM:PF13844 |
| PFscan:PS50005 | PFscan:PS50293 | PANTHER:PTHR44835 | SMART:SM00028 | SMART:SM00671 | EnsemblPlantsGene:SORBI_3007G168300 |
| SUPFAM:SSF48452 | unigene:Sbi.7690 | InterPro:Sel1-like | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_1 |
| InterPro:TPR_repeat | UniParc:UPI00081AB6DA | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr7:-:60318744..60324434
Molecular Weight (calculated)
101489.0 Da
IEP (calculated)
5.859
GRAVY (calculated)
-0.198
Length
915 amino acids
Sequence
(BLAST)
(BLAST)
001: MGQPGTDSVL GKESNGIVPN LNGGVSAAKQ QLEGKEALRY ANILRSRNKF TDAVNLYNIV LEKEGTNVEA LIGKGICLQA QNLPRQAIEC FTEVVKIEPG
101: NACALTHCGM IYKDEGHLVE AAEAYQKART ADPSYKPASE LLAIVLTDLG TSLKLAGNTE EGIQKYCEAL EVDNHYAPAY YNLGVVYSEM MQFEMALSCY
201: EKAALERPLY AEAYCNMGVI YKNRGDLEAA IACYERCLTI SPNFEIAKNN MAIALTDLGT KIGNPQVKIE GDINQGVAYY KKALFYNWHY ADAMYNLGVA
301: YGEMLNFEMA IVFYELALHF NPRCAEACNN LGVIYKDRDN LDKAVECYQM ALSIKPLFAQ SLNNLGVVYT VQGKMDSAAS MIEKAIHANP TYAEAYNNLG
401: VLYRDAGSIT LAIHAYERCL QIDPDSRNAG QNRLLAMNYI DEGSDDKLYE AHREWGKRFM KLYPQYTCWD NTKVADRPLI IGYLSPDYFT HSVSYFIEAP
501: LTHHDYTNCK VVVYSGVVKA DAKTLRFKDR VLKKGGLWRD IYGIDEKRVA SLVREDKVDI LVELTGHTAN NKLGTMACRP APIQVTWIGY PNTTGLPTID
601: YRISDSLADP PITKQKHVEE LVRLPESFLC YTPSPEAGPI CPTPAISNGF VTFGSFNNLA KITPKVLQVW ARILCAVPNS RLVVKCKPFC CENIRQKFLS
701: TLEELGLESL RVDLLPLIHL NHDHMQAYSL MDISLDTFPY AGTTTTCESL YMGVPCVTMA GAVHAHNVGV SLLSKVGLGR LVAKTEDEYV SLALGLASDV
801: NALQELRMSL RELMMKSPVC DGEKFTRGLE AAYRDMWRRY CDGDVPSLRR LELLEEHPVV NKPDSDKTSE KLADLKAQRA GVTVEEDKQP PIMANGVRSP
901: DSPAPAKCEA NGNSG
101: NACALTHCGM IYKDEGHLVE AAEAYQKART ADPSYKPASE LLAIVLTDLG TSLKLAGNTE EGIQKYCEAL EVDNHYAPAY YNLGVVYSEM MQFEMALSCY
201: EKAALERPLY AEAYCNMGVI YKNRGDLEAA IACYERCLTI SPNFEIAKNN MAIALTDLGT KIGNPQVKIE GDINQGVAYY KKALFYNWHY ADAMYNLGVA
301: YGEMLNFEMA IVFYELALHF NPRCAEACNN LGVIYKDRDN LDKAVECYQM ALSIKPLFAQ SLNNLGVVYT VQGKMDSAAS MIEKAIHANP TYAEAYNNLG
401: VLYRDAGSIT LAIHAYERCL QIDPDSRNAG QNRLLAMNYI DEGSDDKLYE AHREWGKRFM KLYPQYTCWD NTKVADRPLI IGYLSPDYFT HSVSYFIEAP
501: LTHHDYTNCK VVVYSGVVKA DAKTLRFKDR VLKKGGLWRD IYGIDEKRVA SLVREDKVDI LVELTGHTAN NKLGTMACRP APIQVTWIGY PNTTGLPTID
601: YRISDSLADP PITKQKHVEE LVRLPESFLC YTPSPEAGPI CPTPAISNGF VTFGSFNNLA KITPKVLQVW ARILCAVPNS RLVVKCKPFC CENIRQKFLS
701: TLEELGLESL RVDLLPLIHL NHDHMQAYSL MDISLDTFPY AGTTTTCESL YMGVPCVTMA GAVHAHNVGV SLLSKVGLGR LVAKTEDEYV SLALGLASDV
801: NALQELRMSL RELMMKSPVC DGEKFTRGLE AAYRDMWRRY CDGDVPSLRR LELLEEHPVV NKPDSDKTSE KLADLKAQRA GVTVEEDKQP PIMANGVRSP
901: DSPAPAKCEA NGNSG
001: MVGLEDDTER ERSPVVENGF SNGSRSSSSS AGVLSPSRKV TQGNDTLSYA NILRARNKFA DALALYEAML EKDSKNVEAH IGKGICLQTQ NKGNLAFDCF
101: SEAIRLDPHN ACALTHCGIL HKEEGRLVEA AESYQKALMA DASYKPAAEC LAIVLTDLGT SLKLAGNTQE GIQKYYEALK IDPHYAPAYY NLGVVYSEMM
201: QYDNALSCYE KAALERPMYA EAYCNMGVIY KNRGDLEMAI TCYERCLAVS PNFEIAKNNM AIALTDLGTK VKLEGDVTQG VAYYKKALYY NWHYADAMYN
301: LGVAYGEMLK FDMAIVFYEL AFHFNPHCAE ACNNLGVLYK DRDNLDKAVE CYQMALSIKP NFAQSLNNLG VVYTVQGKMD AAASMIEKAI LANPTYAEAF
401: NNLGVLYRDA GNITMAIDAY EECLKIDPDS RNAGQNRLLA MNYINEGLDD KLFEAHRDWG WRFTRLHPQY TSWDNLKDPE RPITIGYISP DFFTHSVSYF
501: IEAPLTHHDY TKYKVVVYSA VVKADAKTYR FRDKVLKKGG VWKDIYGIDE KKIASMVRED KIDILVELTG HTANNKLGTM ACRPAPVQVT WIGYPNTTGL
601: PTVDYRITDS LADPPDTKQK QVEELVRLPD CFLCYTPSPE AGPVCPTPAL SNGFVTFGSF NNLAKITPKV LQVWARILCA VPNSRLVVKC KPFCCDSIRQ
701: RFLTTLEQLG LESKRVDLLP LILFNHDHMQ AYSLMDISLD TFPYAGTTTT CESLYMGVPC VTMAGSVHAH NVGVSLLTKV GLGHLVAKNE DEYVQLSVDL
801: ASDVTALSKL RMSLRDLMAG SPVCNGPSFA VGLESAYRNM WKKYCKGEVP SLRRMEMLQK EVHDDPLISK DLGPSRVSVT GEATPSLKAN GSAPVPSSLP
901: TQSPQLSKRM DSTS
101: SEAIRLDPHN ACALTHCGIL HKEEGRLVEA AESYQKALMA DASYKPAAEC LAIVLTDLGT SLKLAGNTQE GIQKYYEALK IDPHYAPAYY NLGVVYSEMM
201: QYDNALSCYE KAALERPMYA EAYCNMGVIY KNRGDLEMAI TCYERCLAVS PNFEIAKNNM AIALTDLGTK VKLEGDVTQG VAYYKKALYY NWHYADAMYN
301: LGVAYGEMLK FDMAIVFYEL AFHFNPHCAE ACNNLGVLYK DRDNLDKAVE CYQMALSIKP NFAQSLNNLG VVYTVQGKMD AAASMIEKAI LANPTYAEAF
401: NNLGVLYRDA GNITMAIDAY EECLKIDPDS RNAGQNRLLA MNYINEGLDD KLFEAHRDWG WRFTRLHPQY TSWDNLKDPE RPITIGYISP DFFTHSVSYF
501: IEAPLTHHDY TKYKVVVYSA VVKADAKTYR FRDKVLKKGG VWKDIYGIDE KKIASMVRED KIDILVELTG HTANNKLGTM ACRPAPVQVT WIGYPNTTGL
601: PTVDYRITDS LADPPDTKQK QVEELVRLPD CFLCYTPSPE AGPVCPTPAL SNGFVTFGSF NNLAKITPKV LQVWARILCA VPNSRLVVKC KPFCCDSIRQ
701: RFLTTLEQLG LESKRVDLLP LILFNHDHMQ AYSLMDISLD TFPYAGTTTT CESLYMGVPC VTMAGSVHAH NVGVSLLTKV GLGHLVAKNE DEYVQLSVDL
801: ASDVTALSKL RMSLRDLMAG SPVCNGPSFA VGLESAYRNM WKKYCKGEVP SLRRMEMLQK EVHDDPLISK DLGPSRVSVT GEATPSLKAN GSAPVPSSLP
901: TQSPQLSKRM DSTS
Arabidopsis Description
SPYProbable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY [Source:UniProtKB/Swiss-Prot;Acc:Q96301]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.