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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
  • plastid 3
  • peroxisome 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, peroxisome, plastid, secretory
BaCelLo:secretory
iPSORT:plastid
MultiLoc:peroxisome
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr8P18400_001 Banana cytosol 13.33 53.85
KRH46925 Soybean plastid 43.81 51.11
KRH18247 Soybean nucleus, plastid 75.24 44.38
KRG93871 Soybean plastid 74.29 43.82
KRG93867 Soybean plastid 74.29 43.82
PGSC0003DMT400067905 Potato plastid 63.81 42.14
KRG99965 Soybean plastid 51.43 41.22
KRG99964 Soybean plastid 38.1 40.0
PGSC0003DMT400032975 Potato mitochondrion, plastid 64.76 37.78
PGSC0003DMT400050381 Potato cytosol, extracellular, plastid 64.76 37.57
PGSC0003DMT400062138 Potato cytosol, plastid 63.81 37.02
Solyc02g085950.2.1 Tomato extracellular 61.9 36.11
Solyc03g034220.2.1 Tomato plastid 61.9 36.11
GSMUA_Achr6P09710_001 Banana plastid 52.38 34.81
GSMUA_Achr2P22730_001 Banana unclear 52.38 34.81
Solyc02g063150.2.1 Tomato nucleus, plastid 60.0 34.81
Os12t0291200-00 Rice plastid 31.43 34.38
GSMUA_Achr10P... Banana plasma membrane 51.43 34.18
Zm00001d052595_P001 Maize plastid 52.38 32.35
Zm00001d004894_P001 Maize plastid 52.38 32.35
EES09292 Sorghum plastid 51.43 31.95
Os12t0291100-01 Rice plastid 52.38 31.43
Os12t0274700-01 Rice plastid 51.43 30.86
KRH15458 Soybean plastid 46.67 30.82
Os12t0291400-01 Rice plastid 50.48 30.29
TraesCS2D01G065300.1 Wheat plastid 49.52 29.89
TraesCS2B01G079300.1 Wheat plastid 49.52 29.89
TraesCS2A01G066700.1 Wheat plastid 49.52 29.89
TraesCS2D01G065600.1 Wheat plastid 49.52 29.71
TraesCS2D01G065400.1 Wheat plastid 49.52 29.71
TraesCS2D01G065200.1 Wheat plastid 49.52 29.71
TraesCS2B01G079400.1 Wheat plastid 49.52 29.71
TraesCS2B01G079200.1 Wheat plastid 49.52 29.71
TraesCS2A01G067300.1 Wheat plastid 49.52 29.71
TraesCS2A01G066800.1 Wheat plastid 49.52 29.71
TraesCS2A01G067100.1 Wheat plastid 49.52 29.71
HORVU2Hr1G010630.1 Barley plastid 49.52 29.71
Os12t0292400-01 Rice extracellular 49.52 29.71
HORVU2Hr1G010690.1 Barley plastid 49.52 29.71
TraesCS2B01G079100.1 Wheat plastid 48.57 29.31
TraesCS5D01G169600.2 Wheat plastid 48.57 29.14
TraesCS2A01G067200.1 Wheat plastid 48.57 29.14
TraesCS5B01G162800.1 Wheat plastid 48.57 29.14
TraesCS5B01G162600.1 Wheat plastid 48.57 29.14
TraesCS2A01G067000.1 Wheat plastid 48.57 29.14
HORVU5Hr1G033540.2 Barley plastid 48.57 29.14
HORVU5Hr1G038630.1 Barley plastid 48.57 29.14
TraesCS5A01G165700.1 Wheat plastid 48.57 29.14
TraesCS5A01G165400.2 Wheat plastid 48.57 29.14
TraesCS5D01G169900.2 Wheat plastid 48.57 29.14
HORVU5Hr1G051010.2 Barley plastid 48.57 29.14
KRH19034 Soybean plastid 47.62 29.07
TraesCS2D01G065100.2 Wheat plastid 47.62 28.74
HORVU1Hr1G035720.2 Barley plastid 47.62 28.41
TraesCS2D01G065500.1 Wheat plastid 43.81 27.88
TraesCS2B01G078900.2 Wheat plastid 48.57 27.57
HORVU2Hr1G010670.1 Barley plastid 49.52 27.37
TraesCS2A01G066900.1 Wheat plastid 49.52 27.08
TraesCS2B01G079500.1 Wheat plastid 49.52 26.94
KRG93872 Soybean plastid 34.29 26.67
HORVU5Hr1G050990.4 Barley plastid 48.57 26.56
KRH01757 Soybean plastid 27.62 19.33
HORVU7Hr1G048050.2 Barley plastid 12.38 14.77
Protein Annotations
KEGG:00630+4.1.1.39KEGG:00710+4.1.1.39MapMan:1.2.1.1.2Gene3D:3.30.190.10UniProt:A0A0R0EST5EMBL:ACUP02011639
EnsemblPlantsGene:GLYMA_19G047000GO:GO:0003674GO:GO:0003824GO:GO:0004497GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0008150GO:GO:0008152GO:GO:0009536GO:GO:0009853
GO:GO:0009987GO:GO:0015977GO:GO:0015979GO:GO:0016491GO:GO:0016829GO:GO:0016984
GO:GO:0055114InterPro:IPR036385EnsemblPlants:KRG93873ProteinID:KRG93873ProteinID:KRG93873.1PFAM:PF00101
PRINTS:PR00152PANTHER:PTHR31262PANTHER:PTHR31262:SF0MetaCyc:PWY-5532MetaCyc:PWY-5723InterPro:RuBisCO_sc
InterPro:RuBisCO_sc_domInterPro:RuBisCO_ssu_sfSUPFAM:SSF55239SignalP:SignalP-noTMUniParc:UPI00054A5DAB:
Description
hypothetical protein
Coordinates
chr19:+:7302271..7303631
Molecular Weight (calculated)
12410.9 Da
IEP (calculated)
8.221
GRAVY (calculated)
-0.447
Length
105 amino acids
Sequence
(BLAST)
001: MLVLAWLFHS QALNPWLASP TRKTNNDITS IAINNGRVKC MHVWQPIGKK FETLSYLPNL DDAQLAKEVE YLLRNGWIPC LEFELEHGFV YREHNRSPRY
101: YDGRY
Best Arabidopsis Sequence Match ( AT5G38410.1 )
(BLAST)
001: MASSMLSSAA VVTSPAQATM VAPFTGLKSS AAFPVTRKTN KDITSIASNG GRVSCMKVWP PIGKKKFETL SYLPDLSDVE LAKEVDYLLR NKWIPCVEFE
101: LEHGFVYREH GNTPGYYDGR YWTMWKLPLF GCTDSAQVLK EVEECKKEYP GAFIRIIGFD NTRQVQCISF IAYKPPSFTE A
Arabidopsis Description
Ribulose bisphosphate carboxylase small chain [Source:UniProtKB/TrEMBL;Acc:B3H5S2]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.