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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • plastid 8
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:plastid
BaCelLo:nucleus
ChloroP:plastid
iPSORT:plastid
MultiLoc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG92600
KRG93305
KRH07953
KRH10294
KRH14106
KRH16959
KRH23029
KRH24840
KRH27601
KRH29844
KRH34180
KRH38067
KRH39044
KRH41413
KRH53667
KRH56614
KRH61471
KRH64261
KRH66789
KRH69706
KRH72058
KRH74010
KRH77881

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G67090.1 KRH10294 AT3G46090.1 17259181
AT1G67090.1 KRH23029 AT3G46090.1 17259181
AT1G67090.1 KRH24840 AT3G46090.1 17259181
AT1G67090.1 KRH29844 AT3G46090.1 17259181
AT1G67090.1 KRH14106 AT5G35750.1 18642946
AT1G67090.1 KRH74010 AT5G35750.1 18642946
AT5G38420.1 KRH66789 AT2G41370.1 21798944
AT5G38420.1 KRH72058 AT2G41370.1 21798944
AT5G38420.1 KRG92600 AT3G04240.1 21798944
AT5G38420.1 KRH34180 AT3G04240.1 21798944
AT5G38420.1 KRH38067 AT3G04240.1 21798944
AT5G38420.1 KRH39044 AT3G17860.1 21798944
AT5G38420.1 KRG93305 AT3G27960.1 21798944
AT5G38420.1 KRH56614 AT3G27960.1 21798944
AT5G38420.1 KRH27601 AT4G04890.1 21798944
AT5G38420.1 KRH77881 AT4G04890.1 21798944
AT5G38420.1 KRH61471 AT4G08150.1 21798944
AT5G38420.1 KRH07953 AT5G11980.1 21798944
AT5G38420.1 KRH69706 AT5G11980.1 21798944
AT5G38420.1 KRH16959 AT5G24660.1 21798944
AT5G38420.1 KRH53667 AT5G24660.1 21798944
AT5G38420.1 KRH64261 AT5G24660.1 21798944
AT5G38430.1 KRH41413 AT2G39930.1 21798944
AT5G38430.1 KRH10294 AT3G46090.1 17259181
AT5G38430.1 KRH23029 AT3G46090.1 17259181
AT5G38430.1 KRH24840 AT3G46090.1 17259181
AT5G38430.1 KRH29844 AT3G46090.1 17259181
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRG99964 Soybean plastid 88.89 80.0
KRG99965 Soybean plastid 88.89 61.07
GSMUA_Achr8P18400_001 Banana cytosol 16.67 57.69
KRH15458 Soybean plastid 95.56 54.09
KRG93873 Soybean plastid 51.11 43.81
KRG93872 Soybean plastid 64.44 42.96
Os12t0291200-00 Rice plastid 45.56 42.71
KRH18247 Soybean nucleus, plastid 84.44 42.7
KRG93867 Soybean plastid 83.33 42.13
KRG93871 Soybean plastid 83.33 42.13
PGSC0003DMT400032975 Potato mitochondrion, plastid 75.56 37.78
Solyc02g085950.2.1 Tomato extracellular 73.33 36.67
PGSC0003DMT400050381 Potato cytosol, extracellular, plastid 73.33 36.46
CDY52468 Canola plastid 72.22 35.91
CDY71122 Canola plastid 72.22 35.91
Bra028174.1-P Field mustard plastid 72.22 35.91
Bra025431.1-P Field mustard plastid 72.22 35.91
AT5G38430.1 Thale cress plastid 72.22 35.91
Solyc03g034220.2.1 Tomato plastid 71.11 35.56
AT5G38410.3 Thale cress plastid 73.33 35.48
CDX67402 Canola plastid 71.11 35.36
AT5G38420.1 Thale cress plastid 71.11 35.36
PGSC0003DMT400062138 Potato cytosol, plastid 71.11 35.36
Bra028406.1-P Field mustard plastid 70.0 34.81
CDY01671 Canola plastid 70.0 34.81
CDY01665 Canola plastid 70.0 34.81
CDX74532 Canola plastid 70.0 34.81
Solyc02g063150.2.1 Tomato nucleus, plastid 68.89 34.25
CDY67657 Canola plastid 68.89 34.25
CDX74525 Canola plastid 68.89 34.25
PGSC0003DMT400067905 Potato plastid 60.0 33.96
AT1G67090.1 Thale cress plastid 67.78 33.89
VIT_17s0000g03690.t01 Wine grape plastid 67.78 33.89
CDX99682 Canola plastid 71.11 33.86
Bra028181.1-P Field mustard plastid 58.89 32.72
CDY42337 Canola plastid 62.22 30.94
CDY42338 Canola plastid 60.0 29.83
Bra034024.1-P Field mustard plastid 60.0 29.83
Bra034027.1-P Field mustard plastid 60.0 29.83
Bra034029.1-P Field mustard plastid 60.0 29.83
CDY12616 Canola plastid 60.0 29.83
CDY12613 Canola plastid 60.0 29.83
GSMUA_Achr6P09710_001 Banana plastid 51.11 29.11
GSMUA_Achr2P22730_001 Banana unclear 50.0 28.48
KRH01757 Soybean plastid 46.67 28.0
GSMUA_Achr10P... Banana plasma membrane 48.89 27.85
Os12t0274700-01 Rice plastid 53.33 27.43
Os12t0291100-01 Rice plastid 53.33 27.43
TraesCS2D01G065500.1 Wheat plastid 50.0 27.27
EES09292 Sorghum plastid 51.11 27.22
Os12t0292400-01 Rice extracellular 52.22 26.86
Os12t0291400-01 Rice plastid 52.22 26.86
HORVU1Hr1G035720.2 Barley plastid 52.22 26.7
Zm00001d004894_P001 Maize plastid 50.0 26.47
Zm00001d052595_P001 Maize plastid 50.0 26.47
TraesCS2D01G065300.1 Wheat plastid 51.11 26.44
TraesCS2B01G079300.1 Wheat plastid 51.11 26.44
TraesCS2A01G066700.1 Wheat plastid 51.11 26.44
CDY42341 Canola plastid 54.44 26.34
TraesCS2B01G079200.1 Wheat plastid 51.11 26.29
TraesCS2D01G065400.1 Wheat plastid 51.11 26.29
TraesCS2D01G065200.1 Wheat plastid 51.11 26.29
TraesCS2B01G079400.1 Wheat plastid 51.11 26.29
HORVU5Hr1G051010.2 Barley plastid 51.11 26.29
TraesCS2D01G065600.1 Wheat plastid 51.11 26.29
TraesCS5A01G165400.2 Wheat plastid 51.11 26.29
TraesCS5A01G165700.1 Wheat plastid 51.11 26.29
TraesCS5B01G162600.1 Wheat plastid 51.11 26.29
TraesCS5B01G162800.1 Wheat plastid 51.11 26.29
TraesCS5D01G169600.2 Wheat plastid 51.11 26.29
TraesCS5D01G169900.2 Wheat plastid 51.11 26.29
HORVU5Hr1G038630.1 Barley plastid 51.11 26.29
TraesCS2A01G067300.1 Wheat plastid 51.11 26.29
HORVU5Hr1G033540.2 Barley plastid 51.11 26.29
HORVU2Hr1G010690.1 Barley plastid 51.11 26.29
HORVU2Hr1G010630.1 Barley plastid 51.11 26.29
TraesCS2A01G066800.1 Wheat plastid 51.11 26.29
HORVU7Hr1G048050.2 Barley plastid 25.56 26.14
TraesCS2D01G065100.2 Wheat plastid 50.0 25.86
TraesCS2B01G079100.1 Wheat plastid 50.0 25.86
TraesCS2A01G067100.1 Wheat plastid 50.0 25.71
TraesCS2A01G067200.1 Wheat plastid 50.0 25.71
TraesCS2A01G067000.1 Wheat plastid 48.89 25.14
TraesCS2B01G078900.2 Wheat plastid 50.0 24.32
HORVU2Hr1G010670.1 Barley plastid 51.11 24.21
TraesCS2A01G066900.1 Wheat plastid 51.11 23.96
HORVU5Hr1G050990.4 Barley plastid 51.11 23.96
TraesCS2B01G079500.1 Wheat plastid 51.11 23.83
KRH19034 Soybean plastid 42.22 22.09
CDY12612 Canola cytosol 12.22 9.09
Protein Annotations
EMBL:ACUP02005367EnsemblPlants:KRH46925EnsemblPlantsGene:GLYMA_08G365300Gene3D:3.30.190.10InterPro:IPR036385InterPro:RuBisCO_sc
InterPro:RuBisCO_ssu_NInterPro:RuBisCO_ssu_sfKEGG:00630+4.1.1.39KEGG:00710+4.1.1.39MetaCyc:PWY-5532MetaCyc:PWY-5723
PANTHER:PTHR31262PFAM:PF12338PRINTS:PR00152ProteinID:KRH46925ProteinID:KRH46925.1SUPFAM:SSF55239
UniParc:UPI0006EDEA79UniProt:A0A0R0IXA7MapMan:1.2.1.1.2:::
Description
hypothetical protein
Coordinates
chr8:+:47632289..47633490
Molecular Weight (calculated)
9968.2 Da
IEP (calculated)
9.196
GRAVY (calculated)
-0.116
Length
90 amino acids
Sequence
(BLAST)
1: MASSMMSSPA VTTVNRGSMV APFTGLKSMA GFPVRKTNYD ITSIASNTGR VWPPIGKKKF ETLSYLPPLT REQLLKEDGW IPCLEFELEL
Best Arabidopsis Sequence Match ( AT5G38410.3 )
(BLAST)
001: MASSMLSSAA VVTSPAQATM VAPFTGLKSS AAFPVTRKTN KDITSIASNG GRVSCMKVWP PIGKKKFETL SYLPDLSDVE LAKEVDYLLR NKWIPCVEFE
101: LEVINTKHGF VYREHGNTPG YYDGRYWTMW KLPLFGCTDS AQVLKEVEEC KKEYPGAFIR IIGFDNTRQV QCISFIAYKP PSFTEA
Arabidopsis Description
Ribulose bisphosphate carboxylase small chain [Source:UniProtKB/TrEMBL;Acc:B3H5S2]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.