CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400053345	Potato	cytosol	29.45	81.03
VIT_11s0078g00310.t01	Wine grape	extracellular, golgi	53.26	78.85
Os08t0520900-00	Rice	cytosol, plastid	66.54	73.24
CDX74820	Canola	plastid	70.3	71.28
CDY20500	Canola	plastid	69.3	70.54
Solyc07g014590.2.1	Tomato	extracellular	69.55	70.52
AT2G39930.1	Thale cress	plastid	69.17	70.5
Bra005001.1-P	Field mustard	plastid	69.8	68.94
GSMUA_Achr9P14020_001	Banana	plasma membrane, vacuole	58.9	67.34
TraesCS7A01G251400.1	Wheat	mitochondrion, plastid	64.66	65.32
KXG25605	Sorghum	plastid	64.66	65.15
TraesCS7D01G249500.1	Wheat	mitochondrion, plastid	64.29	64.85
TraesCS7B01G139700.2	Wheat	plastid	64.16	64.81
HORVU7Hr1G051710.1	Barley	vacuole	36.72	58.13
Zm00001d049753_P001	Maize	mitochondrion, plastid	59.15	56.59
VIT_11s0078g00380.t01	Wine grape	cytosol	20.93	54.05
KRH62892	Soybean	mitochondrion	5.76	52.27
KRH53006	Soybean	plastid	40.35	41.71
Zm00001d052844_P001	Maize	cytosol	8.77	40.94
KRH62296	Soybean	plastid	39.72	40.49
KRH67160	Soybean	plastid	27.94	25.75
KRG95479	Soybean	mitochondrion	27.44	25.32
Zm00001d050532_P001	Maize	extracellular	10.28	20.2
Zm00001d024985_P004	Maize	plastid	4.76	16.89
Zm00001d016045_P001	Maize	plastid	7.52	16.26
KRH34652	Soybean	plastid	12.41	10.41

Protein Annotations

EntrezGene:100792587	Gene3D:2.60.40.10	Gene3D:2.60.40.1180	MapMan:3.2.2.6	MapMan:3.2.3.3.2.1	Gene3D:3.20.20.80
EMBL:ACUP02004764	EnsemblPlantsGene:GLYMA_08G028400	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0005977	GO:GO:0005983
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	GO:GO:0010021	GO:GO:0010368	GO:GO:0016787	GO:GO:0019156
GO:GO:0043033	InterPro:Glyco_hydro_13_N	InterPro:Glyco_hydro_13_cat_dom	InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF	UniProt:I1KPR5
InterPro:IPR013780	InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:Ig_E-set	EnsemblPlants:KRH41413	ProteinID:KRH41413
ProteinID:KRH41413.1	PFAM:PF00128	PFAM:PF02922	PANTHER:PTHR43002	PANTHER:PTHR43002:SF1	SMART:SM00642
SUPFAM:SSF51011	SUPFAM:SSF51445	SUPFAM:SSF81296	UniParc:UPI000294BDB5	SEG:seg	:

Description

hypothetical protein

Coordinates

chr8:-:2264965..2275010

Molecular Weight (calculated)

89860.0 Da

IEP (calculated)

5.719

GRAVY (calculated)

-0.335

Length

798 amino acids

Sequence
(BLAST)

001: MPMACFSILS PPHPTLTLTL LPPSHSQCGG FTVRVSVALT ERLSQHHKTN SIIPSTRAAA NGGGFETETA VVEKPQLKTL FQASRGYPSP FGATVRDGGV
101: NFAISSLNAL SATLCFFTLS DFQNNRVTEY VPLDPLINRT GGVWHVFLKG DFRDMLYGYK FDGKFSPLEG HYFDSSHILL DPYAKAVISR GEFGALGPDG
201: NCWPQMAGTV PSEDDEFDWE GDLPLKYPQK DLVIYEMHVR GFTKHESSNT KFPGTYLGVV EKLDHLKELG VNCLELMPCH EFNELEYYGH NSAQGDYRVN
301: FWGYSTINYF SPMIRYSSAG IRNCGQDGIN EIKFLIKEAH KRGIEVIMDV VFNHTAEGNE NGPIISFRGV DNSMYYMLAP KGEFYNYSGC GNTFNCNHPV
401: VRQFIVDCLR YWVTEMHVDG FRFDLASIMT RSSSLWDGAN VFGAPIEGDL LTTGTPLSSP PLIDLISNDP ILCGVKLIAE AWDAGGLYQV GTFPHWGIWS
501: EWNGKYRDTV RLFIKGTDGF AGAFAECLCG SPNLYQGGGR KPWHSINFVC AHDGFTLADL VTYNNKNNLS NGEDNNDGEN HNNSWNCGQE GEFVSTSVKK
601: LRKRQMRNFF LSLMVSQGVP MIYMGDEYGH TKGGNNNTYC HDNYHNYFQW DKKEESSSDF FRFCRLMTKF RQECESLGLA DFPTSERLQW HGHFPGKPDW
701: SETSRFVACT MVDSVKGEIY IAFNMSHLPF TVTLPERPGY KWEPLVDTSK PTPYDFLTPD LPGRDIAIQQ YAQFLDANMY PMLSYSSIIL LRIPDENL

Best Arabidopsis Sequence Match ( AT2G39930.1 )
(BLAST)

001: MDAIKCSSSF LHHTKLNTLF SNHTFPKISA PNFKPLFRPI SISAKDRRSN EAENIAVVEK PLKSDRFFIS DGLPSPFGPT VRDDGVNFSV YSTNSVSATI
101: CLISLSDLRQ NKVTEEIQLD PSRNRTGHVW HVFLRGDFKD MLYGYRFDGK FSPEEGHYYD SSNILLDPYA KAIISRDEFG VLGPDDNCWP QMACMVPTRE
201: EEFDWEGDMH LKLPQKDLVI YEMHVRGFTR HESSKIEFPG TYQGVAEKLD HLKELGINCI ELMPCHEFNE LEYYSYNTIL GDHRVNFWGY STIGFFSPMI
301: RYASASSNNF AGRAINEFKI LVKEAHKRGI EVIMDVVLNH TAEGNEKGPI FSFRGVDNSV YYMLAPKGEF YNYSGCGNTF NCNHPVVRQF ILDCLRYWVT
401: EMHVDGFRFD LGSIMSRSSS LWDAANVYGA DVEGDLLTTG TPISCPPVID MISNDPILRG VKLIAEAWDA GGLYQVGMFP HWGIWSEWNG KFRDVVRQFI
501: KGTDGFSGAF AECLCGSPNL YQGGRKPWHS INFICAHDGF TLADLVTYNN KNNLANGEEN NDGENHNYSW NCGEEGDFAS ISVKRLRKRQ MRNFFVSLMV
601: SQGVPMIYMG DEYGHTKGGN NNTYCHDNYM NYFRWDKKEE AHSDFFRFCR ILIKFRDECE SLGLNDFPTA KRLQWHGLAP EIPNWSETSR FVAFSLVDSV
701: KKEIYVAFNT SHLATLVSLP NRPGYRWEPF VDTSKPSPYD CITPDLPERE TAMKQYRHFL DANVYPMLSY SSIILLLSPI KDP

Arabidopsis Description

ISA1ISA1 [Source:UniProtKB/TrEMBL;Acc:A0A178VW25]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.