Factsheet for Bra005001.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74820	Canola	plastid	96.66	99.24
CDY20500	Canola	plastid	94.18	97.07
AT2G39930.1	Thale cress	plastid	84.03	86.72
PGSC0003DMT400053345	Potato	cytosol	28.71	80.0
VIT_11s0078g00310.t01	Wine grape	extracellular, golgi	50.99	76.44
Solyc07g014590.2.1	Tomato	extracellular	69.55	71.41
KRH41413	Soybean	plastid	68.94	69.8
Os08t0520900-00	Rice	cytosol, plastid	62.13	69.24
GSMUA_Achr9P14020_001	Banana	plasma membrane, vacuole	56.81	65.76
TraesCS7A01G251400.1	Wheat	mitochondrion, plastid	63.24	64.68
TraesCS7B01G139700.2	Wheat	plastid	62.99	64.43
TraesCS7D01G249500.1	Wheat	mitochondrion, plastid	62.99	64.35
KXG25605	Sorghum	plastid	61.76	63.01
HORVU7Hr1G051710.1	Barley	vacuole	35.52	56.94
Zm00001d049753_P001	Maize	mitochondrion, plastid	53.96	52.28
VIT_11s0078g00380.t01	Wine grape	cytosol	19.18	50.16
Bra000667.1-P	Field mustard	plastid	37.25	41.81
Bra014111.1-P	Field mustard	mitochondrion	6.68	37.76
Bra014108.1-P	Field mustard	cytosol	9.28	36.23
Zm00001d052844_P001	Maize	cytosol	7.43	35.09
Bra030528.1-P	Field mustard	cytosol	25.99	28.53
Bra033388.1-P	Field mustard	plastid	25.74	24.53
Zm00001d050532_P001	Maize	extracellular	8.54	17.0
Zm00001d016045_P001	Maize	plastid	6.56	14.36
Zm00001d024985_P004	Maize	plastid	3.84	13.78
Bra040385.1-P	Field mustard	cytosol, plasma membrane, plastid	7.8	8.4
Bra009461.1-P	Field mustard	plastid	13.49	8.17

Protein Annotations

Gene3D:2.60.40.10	Gene3D:2.60.40.1180	MapMan:3.2.2.6	MapMan:3.2.3.3.2.1	Gene3D:3.20.20.80	EnsemblPlantsGene:Bra005001
EnsemblPlants:Bra005001.1	EnsemblPlants:Bra005001.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0005977	GO:GO:0005983
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	GO:GO:0010021	GO:GO:0010368	GO:GO:0016787	GO:GO:0019156
GO:GO:0043033	InterPro:Glyco_hydro_13_N	InterPro:Glyco_hydro_13_cat_dom	InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780
InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:Ig_E-set	UniProt:M4CLB4	PFAM:PF02922	PANTHER:PTHR43002
PANTHER:PTHR43002:SF1	SMART:SM00642	SUPFAM:SSF51011	SUPFAM:SSF51445	SUPFAM:SSF81296	UniParc:UPI00025473D2
SEG:seg	:	:	:	:	:

Description

AT2G39930 (E=2e-248) ISA1, ATISA1 | ISA1 (ISOAMYLASE 1); alpha-amylase/ isoamylase

Coordinates

chrA05:-:2904548..2910231

Molecular Weight (calculated)

91546.0 Da

IEP (calculated)

5.493

GRAVY (calculated)

-0.340

Length

808 amino acids

Sequence
(BLAST)

001: MDALKCSSST FLPLTNLNTL FSNHAFPKSP APNFNRRAAQ PLSLSAKDTA RTSEPENVAV VEKPPPSKRF LVSDGLPSPF GATVRDNGVN FSVYSSNSVS
101: ATICLISLSD LRQNKVTEEI ELDPSRNRTG HVWHVFLKGS FEDMMYGYRF DGKFSPEEGH YYDSSNILLD PYAKAIISRD EFGVLGADDN CWPQMACMVP
201: TLGEEFDWEG DMPLKLLQKD LVIYEMHVRG FTRHESSNIE FPGTYQGVAE KLDHLQELGI NCIELMPCHE FNELEYYSYN PILGDHRVNF WGYSTIGFFS
301: PMSRYSSASS RNFAGRAINE FKTLVKEAHK RGIEVTTNFL VAKYFLLGPF LIDSKQVIMD VVLNHTAEGN EKGPIFSFRG VDNSVYYMLA PKGEFYNYSG
401: CGNTFNCNHP VVRQFIVDCL RYWVTEMHVD GFRFDLGSIM SRSSSLWDAA NVYGADVEGD LLTTGTPVSC PPVIDMISND PVLRGVKLIA EAWDAGGLYQ
501: VGMFPHWGIW SEWNGKFRDV VRHFIKGTDG FSGAFAECLC GSPNLYQGGR KPWNSINFVC AHDGFTLADL VTYNNKNNLA NGEENNDGEN HNCSWNCGEE
601: GDFVSISVKR LRKRQMRNFF VSLMVAQGVP MIYMGDEYGH TKGGNNNTYC HDNYLNYFRW DKKEEAHDDY FRFCRLLIKF RDECESLGLD DFPTAKRLQW
701: HGIAPETPDW SETSRFVAFS LVDSVKKEIY VALNTSHLAT LVTLPNRPGY RWEPFVDTSK PSPFDCITHD LPGRETAMKQ YRHFLDANMY PMLSYSSIIL
801: LLSPIDDS

Best Arabidopsis Sequence Match ( AT2G39930.1 )
(BLAST)

001: MDAIKCSSSF LHHTKLNTLF SNHTFPKISA PNFKPLFRPI SISAKDRRSN EAENIAVVEK PLKSDRFFIS DGLPSPFGPT VRDDGVNFSV YSTNSVSATI
101: CLISLSDLRQ NKVTEEIQLD PSRNRTGHVW HVFLRGDFKD MLYGYRFDGK FSPEEGHYYD SSNILLDPYA KAIISRDEFG VLGPDDNCWP QMACMVPTRE
201: EEFDWEGDMH LKLPQKDLVI YEMHVRGFTR HESSKIEFPG TYQGVAEKLD HLKELGINCI ELMPCHEFNE LEYYSYNTIL GDHRVNFWGY STIGFFSPMI
301: RYASASSNNF AGRAINEFKI LVKEAHKRGI EVIMDVVLNH TAEGNEKGPI FSFRGVDNSV YYMLAPKGEF YNYSGCGNTF NCNHPVVRQF ILDCLRYWVT
401: EMHVDGFRFD LGSIMSRSSS LWDAANVYGA DVEGDLLTTG TPISCPPVID MISNDPILRG VKLIAEAWDA GGLYQVGMFP HWGIWSEWNG KFRDVVRQFI
501: KGTDGFSGAF AECLCGSPNL YQGGRKPWHS INFICAHDGF TLADLVTYNN KNNLANGEEN NDGENHNYSW NCGEEGDFAS ISVKRLRKRQ MRNFFVSLMV
601: SQGVPMIYMG DEYGHTKGGN NNTYCHDNYM NYFRWDKKEE AHSDFFRFCR ILIKFRDECE SLGLNDFPTA KRLQWHGLAP EIPNWSETSR FVAFSLVDSV
701: KKEIYVAFNT SHLATLVSLP NRPGYRWEPF VDTSKPSPYD CITPDLPERE TAMKQYRHFL DANVYPMLSY SSIILLLSPI KDP

Arabidopsis Description

ISA1ISA1 [Source:UniProtKB/TrEMBL;Acc:A0A178VW25]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.