CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0520900-00	Rice	cytosol, plastid	75.88	82.9
TraesCS7A01G251400.1	Wheat	mitochondrion, plastid	78.91	79.11
TraesCS7D01G249500.1	Wheat	mitochondrion, plastid	78.79	78.89
TraesCS7B01G139700.2	Wheat	plastid	78.66	78.86
PGSC0003DMT400053345	Potato	cytosol	28.16	76.9
VIT_11s0078g00310.t01	Wine grape	extracellular, golgi	50.25	73.84
Zm00001d049753_P001	Maize	mitochondrion, plastid	73.23	69.54
HORVU7Hr1G051710.1	Barley	vacuole	43.69	68.65
GSMUA_Achr9P14020_001	Banana	plasma membrane, vacuole	60.48	68.62
Solyc07g014590.2.1	Tomato	extracellular	65.53	65.95
KRH41413	Soybean	plastid	65.15	64.66
CDX74820	Canola	plastid	63.13	63.53
CDY20500	Canola	plastid	62.75	63.39
AT2G39930.1	Thale cress	plastid	61.74	62.45
Bra005001.1-P	Field mustard	plastid	63.01	61.76
VIT_11s0078g00380.t01	Wine grape	cytosol	16.41	42.07
KXG35819	Sorghum	plastid	40.53	41.37
OQU77947	Sorghum	plastid	26.77	26.5
KXG25811	Sorghum	plastid	13.51	11.1

Protein Annotations

Gene3D:2.60.40.10	Gene3D:2.60.40.1180	MapMan:3.2.2.6	MapMan:3.2.3.3.2.1	Gene3D:3.20.20.80	UniProt:A0A1B6PJ17
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005975	GO:GO:0005977	GO:GO:0005983	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987
GO:GO:0010021	GO:GO:0010368	GO:GO:0016787	GO:GO:0019156	GO:GO:0043033	InterPro:Glyco_hydro_13_N
InterPro:Glyco_hydro_13_cat_dom	InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780	InterPro:IPR013783	InterPro:Ig-like_fold
InterPro:Ig_E-set	EnsemblPlants:KXG25605	ProteinID:KXG25605	ProteinID:KXG25605.1	PFAM:PF00128	PFAM:PF02922
PANTHER:PTHR43002	PANTHER:PTHR43002:SF1	SMART:SM00642	EnsemblPlantsGene:SORBI_3007G204600	SUPFAM:SSF51011	SUPFAM:SSF51445
SUPFAM:SSF81296	UniParc:UPI00081ACE1A	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:63511383..63518338

Molecular Weight (calculated)

88884.0 Da

IEP (calculated)

6.120

GRAVY (calculated)

-0.332

Length

792 amino acids

Sequence
(BLAST)

001: MTQLPSVSSP RPLLAVPAVR WRAGVRARPN AAGSAGAGRG RLFFRAAAAR PVATAVQAEQ EDGEEEEEVV VEERYALGGA CRVLAGMPAP LGATALHGGV
101: NFAVYSSGAS AASLCLFTPD DLKAETVTEE VPLDPLLNLT GNVWHVFIHG DQLHDMLYGY RFDGVFAPER GQYYDVSNIV VDPYAKAVVS RGKYGVPGPG
201: DNCWPQMAGM IPLPHSTFNW QGDLPLKYHQ KDLVIYEMHL RGFTKHDSSN AKHPGTYIGA VSKLDHLKEL GVNCIELMPC HEFNELEYFS SSSKMNFWGY
301: STINFFSPMA RYSSSGIRDS GRGAINEFKT FVREAHKRGI EVIMDVVFNH TAEGNEKGPI LSFRGIDNST YYMLAPKGEF YNYSGCGNTF NCNHPVVREF
401: IVDCLRYWVT EMHVDGFRFD LASIMTRGCS LWDPVNVYGS PMEGDMITTG TPLVSPPLVD MISNDPILGD VKLIAEAWDA GGLYQVGQFP HWNVWSEWNG
501: KYRDTVRQFI KGTDGFAGAF AECLCGSPQL YQAGGRKPWH SVNFVCAHDG FTLADLVTYN NKYNLSNGEN NRDGENHNLS WNCGEEGEFA SLSVRRLRKR
601: QMRNFFVCLM VSQGVPMFYM GDEYGHTKGG NNNTYCHDHY VNYFRWDKKE EQSSDLYRFC RLMTKFRKEC ESLGLEDFPT SERLQWHGHQ PGKPDWSEAS
701: RFVAFTMKDE TKGEIYVAFN TSHLPVVVGL PERPGFRWEP VVDTGKEAPY DFLTDGLPDR AVTIYQFSHF LNSNLYPMLS YSSIILVLRP DV

Best Arabidopsis Sequence Match ( AT2G39930.1 )
(BLAST)

001: MDAIKCSSSF LHHTKLNTLF SNHTFPKISA PNFKPLFRPI SISAKDRRSN EAENIAVVEK PLKSDRFFIS DGLPSPFGPT VRDDGVNFSV YSTNSVSATI
101: CLISLSDLRQ NKVTEEIQLD PSRNRTGHVW HVFLRGDFKD MLYGYRFDGK FSPEEGHYYD SSNILLDPYA KAIISRDEFG VLGPDDNCWP QMACMVPTRE
201: EEFDWEGDMH LKLPQKDLVI YEMHVRGFTR HESSKIEFPG TYQGVAEKLD HLKELGINCI ELMPCHEFNE LEYYSYNTIL GDHRVNFWGY STIGFFSPMI
301: RYASASSNNF AGRAINEFKI LVKEAHKRGI EVIMDVVLNH TAEGNEKGPI FSFRGVDNSV YYMLAPKGEF YNYSGCGNTF NCNHPVVRQF ILDCLRYWVT
401: EMHVDGFRFD LGSIMSRSSS LWDAANVYGA DVEGDLLTTG TPISCPPVID MISNDPILRG VKLIAEAWDA GGLYQVGMFP HWGIWSEWNG KFRDVVRQFI
501: KGTDGFSGAF AECLCGSPNL YQGGRKPWHS INFICAHDGF TLADLVTYNN KNNLANGEEN NDGENHNYSW NCGEEGDFAS ISVKRLRKRQ MRNFFVSLMV
601: SQGVPMIYMG DEYGHTKGGN NNTYCHDNYM NYFRWDKKEE AHSDFFRFCR ILIKFRDECE SLGLNDFPTA KRLQWHGLAP EIPNWSETSR FVAFSLVDSV
701: KKEIYVAFNT SHLATLVSLP NRPGYRWEPF VDTSKPSPYD CITPDLPERE TAMKQYRHFL DANVYPMLSY SSIILLLSPI KDP

Arabidopsis Description

ISA1ISA1 [Source:UniProtKB/TrEMBL;Acc:A0A178VW25]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.