Factsheet for GSMUA_Achr9P14020_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

nucleus 1
plastid 3
vacuole 3
extracellular 2
endoplasmic reticulum 2
plasma membrane 3
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	vacuole
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400053345	Potato	cytosol	34.24	82.41
VIT_11s0078g00310.t01	Wine grape	extracellular, golgi	60.17	77.92
Os08t0520900-00	Rice	cytosol, plastid	68.62	66.07
TraesCS7A01G251400.1	Wheat	mitochondrion, plastid	68.77	60.76
KXG25605	Sorghum	plastid	68.62	60.48
TraesCS7B01G139700.2	Wheat	plastid	68.34	60.38
TraesCS7D01G249500.1	Wheat	mitochondrion, plastid	68.34	60.3
Solyc07g014590.2.1	Tomato	extracellular	67.91	60.23
KRH41413	Soybean	plastid	67.34	58.9
CDY20500	Canola	plastid	65.9	58.67
CDX74820	Canola	plastid	65.9	58.45
AT2G39930.1	Thale cress	plastid	65.33	58.24
Bra005001.1-P	Field mustard	plastid	65.76	56.81
Zm00001d049753_P001	Maize	mitochondrion, plastid	60.46	50.6
HORVU7Hr1G051710.1	Barley	vacuole	34.53	47.82
Zm00001d052844_P001	Maize	cytosol	10.03	40.94
GSMUA_Achr9P14980_001	Banana	cytosol	39.54	38.6
VIT_11s0078g00380.t01	Wine grape	cytosol	10.46	23.62
GSMUA_Achr6P16200_001	Banana	cytosol, plasma membrane, vacuole	16.76	22.99
GSMUA_Achr6P16190_001	Banana	cytosol, plasma membrane, vacuole	24.21	22.35
Zm00001d050532_P001	Maize	extracellular	11.46	19.7
Zm00001d016045_P001	Maize	plastid	8.74	16.53
Zm00001d024985_P004	Maize	plastid	5.01	15.56
GSMUA_Achr9P14010_001	Banana	plastid	3.72	11.5

Protein Annotations

Gene3D:2.60.40.1180	MapMan:3.2.2.6	MapMan:3.2.3.3.2.1	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0005977
GO:GO:0005983	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058
GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0010021	GO:GO:0010368	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0019156	GO:GO:0043033	EnsemblPlantsGene:GSMUA_Achr9G14020_001	EnsemblPlants:GSMUA_Achr9P14020_001
EnsemblPlants:GSMUA_Achr9T14020_001	InterPro:Glyco_hydro_13_cat_dom	InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780	UniProt:M0U060
PFAM:PF00128	PANTHER:PTHR43002	PANTHER:PTHR43002:SF1	SMART:SM00642	SUPFAM:SSF51011	SUPFAM:SSF51445
TMHMM:TMhelix	UniParc:UPI0002950836	SEG:seg	:	:	:

Description

Isoamylase 1, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr9G14020_001]

Coordinates

chr9:+:9085868..9094700

Molecular Weight (calculated)

79682.3 Da

IEP (calculated)

6.206

GRAVY (calculated)

-0.357

Length

698 amino acids

Sequence
(BLAST)

001: MSMSGQLFES SSGALCFKIF LKNCYLIYLY IYIYLVYAIY GIWAGLGYKG ASICLAKILT RPLSSQDMNK CPENNTYNAN LYNLPNGEEE VRWHNLWKKK
101: KRRKKEGLGT GSERQAVGSR SPFNIFDWEG DLPLQYPQKD LIIYEMHVRG FTKHDSSEID SPGTYISAIK KLDHLKELGI NCIELMPCHE FNELEAFSSG
201: LNFWGYSTVS YFSPMIRYSS AGLANCGRDA INEFKTLIRE AHKRGIEVLL DVVFNHTAEG NENGPMISFR GIDNSTYYML APKGEFYNYS GCGNTFNCNH
301: PVVRQFIVDC LRYWVTEMHV DGFRFDLASI MTRSCSLWDP VNVYGNPIEG DMVTTGTPVG GPPVIEMISN DPILCKVKLI AEAWDAGGLY QVGSFPHSGI
401: WSEWNGQYRD IVRQFIKGTD GFAGAFAQCL CGSPNLYQDG GRKPWHSINF ICAHDGFTLA DLVTYNNKSN LSNGEDNRDG ENHNLSWNCG EEGEFASITV
501: RRLRKRQMRN FFLCLMVSQG VPMIYMGDEY GHTKGGNNNT YCHDNYFNYF RWDRKEESSS DFYRFCRLMI KFRYECESLG LDEFPTAERL QWHGHQPKTP
601: DWSETSRFVA FTMSDSLKGE IYVAFNTSHL PVTVTLPERS GYRWEPLVDT SKPVPYDFLS DDVPDRATAV KLYSHFLDAN LYPMLSYSSV ILILQPDA

Best Arabidopsis Sequence Match ( AT2G39930.1 )
(BLAST)

001: MDAIKCSSSF LHHTKLNTLF SNHTFPKISA PNFKPLFRPI SISAKDRRSN EAENIAVVEK PLKSDRFFIS DGLPSPFGPT VRDDGVNFSV YSTNSVSATI
101: CLISLSDLRQ NKVTEEIQLD PSRNRTGHVW HVFLRGDFKD MLYGYRFDGK FSPEEGHYYD SSNILLDPYA KAIISRDEFG VLGPDDNCWP QMACMVPTRE
201: EEFDWEGDMH LKLPQKDLVI YEMHVRGFTR HESSKIEFPG TYQGVAEKLD HLKELGINCI ELMPCHEFNE LEYYSYNTIL GDHRVNFWGY STIGFFSPMI
301: RYASASSNNF AGRAINEFKI LVKEAHKRGI EVIMDVVLNH TAEGNEKGPI FSFRGVDNSV YYMLAPKGEF YNYSGCGNTF NCNHPVVRQF ILDCLRYWVT
401: EMHVDGFRFD LGSIMSRSSS LWDAANVYGA DVEGDLLTTG TPISCPPVID MISNDPILRG VKLIAEAWDA GGLYQVGMFP HWGIWSEWNG KFRDVVRQFI
501: KGTDGFSGAF AECLCGSPNL YQGGRKPWHS INFICAHDGF TLADLVTYNN KNNLANGEEN NDGENHNYSW NCGEEGDFAS ISVKRLRKRQ MRNFFVSLMV
601: SQGVPMIYMG DEYGHTKGGN NNTYCHDNYM NYFRWDKKEE AHSDFFRFCR ILIKFRDECE SLGLNDFPTA KRLQWHGLAP EIPNWSETSR FVAFSLVDSV
701: KKEIYVAFNT SHLATLVSLP NRPGYRWEPF VDTSKPSPYD CITPDLPERE TAMKQYRHFL DANVYPMLSY SSIILLLSPI KDP

Arabidopsis Description

ISA1ISA1 [Source:UniProtKB/TrEMBL;Acc:A0A178VW25]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.