Factsheet for Zm00001d049753_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 5
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400053345	Potato	cytosol	26.62	76.55
Os08t0520900-00	Rice	cytosol, plastid	66.07	76.0
KXG25605	Sorghum	plastid	69.54	73.23
TraesCS7A01G251400.1	Wheat	mitochondrion, plastid	64.63	68.23
TraesCS7D01G249500.1	Wheat	mitochondrion, plastid	64.63	68.14
TraesCS7B01G139700.2	Wheat	plastid	64.15	67.72
VIT_11s0078g00310.t01	Wine grape	extracellular, golgi	40.89	63.27
GSMUA_Achr9P14020_001	Banana	plasma membrane, vacuole	50.6	60.46
KRH41413	Soybean	plastid	56.59	59.15
Solyc07g014590.2.1	Tomato	extracellular	55.52	58.83
AT2G39930.1	Thale cress	plastid	53.0	56.45
HORVU7Hr1G051710.1	Barley	vacuole	33.81	55.95
CDX74820	Canola	plastid	52.4	55.53
CDY20500	Canola	plastid	52.04	55.36
Bra005001.1-P	Field mustard	plastid	52.28	53.96
Zm00001d052844_P001	Maize	cytosol	11.03	53.8
VIT_11s0078g00380.t01	Wine grape	cytosol	15.47	41.75
Zm00001d020799_P003	Maize	mitochondrion	35.13	36.53
Zm00001d005949_P001	Maize	cytosol, mitochondrion, vacuole	12.11	36.2
Zm00001d050532_P001	Maize	extracellular	11.51	23.65
Zm00001d038121_P001	Maize	plastid	24.34	23.09
Zm00001d050508_P001	Maize	cytosol	2.16	22.78
Zm00001d016045_P001	Maize	plastid	9.47	21.41
Zm00001d005948_P001	Maize	golgi, plasma membrane, plastid	9.47	18.9
Zm00001d024985_P004	Maize	plastid	4.2	15.56
Zm00001d004438_P005	Maize	plastid	12.11	10.42

Protein Annotations

Gene3D:2.60.40.10	Gene3D:2.60.40.1180	MapMan:3.2.2.6	MapMan:3.2.3.3.2.1	Gene3D:3.20.20.80	UniProt:A0A1D6PXQ9
ProteinID:AQK51280.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_13_N	InterPro:Glyco_hydro_13_cat_dom	InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF
InterPro:IPR013780	InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:Ig_E-set	PFAM:PF00128	PFAM:PF02922
PANTHER:PTHR43002	PANTHER:PTHR43002:SF1	SMART:SM00642	SUPFAM:SSF51011	SUPFAM:SSF51445	SUPFAM:SSF81296
UniParc:UPI000844F68F	EnsemblPlantsGene:Zm00001d049753	EnsemblPlants:Zm00001d049753_P001	EnsemblPlants:Zm00001d049753_T001	SEG:seg	:

Description

sugary1Sugary1

Coordinates

chr4:+:43110569..43119167

Molecular Weight (calculated)

93740.9 Da

IEP (calculated)

7.745

GRAVY (calculated)

-0.251

Length

834 amino acids

Sequence
(BLAST)

001: MAQQLPCVSS PRPLLAVPAG RWRAGVRGRP NVAGLGRGRL SLHAAAARPV AEAVQAEEDD DDDDEEVAEE RFALGGACRV LAGMPAPLGA TALRGGVNFA
101: VYSSGASAAS LCLFAPGDLK AHTPVLKWTE FSVFLLHGML YGYRFDGVFA PERGQYYDVS NVVVDPYAKA VVSRGEYGVP APGGSCWPQM AGMIPLPYNK
201: FDWQGDLPLG YHQKDLVIYE MHLRGFTKHN SSKTKHPGTY IGAVSKLDHL KELGVNCIEL MPCHEFNELE YFSSSSKMNF WGYSTINFFS PMARYSSSGI
301: RDSGCGAINE FKAFVREAHK RGIEVIMDVV FNHTAEGNEK GPILSFRGID NSTYYMLAPK GEFYNYSGCG NTFNCNHPVV REFIVDCLRY WVTEMHVDGF
401: RFDLASILTR GCSSLLKHGM QEVSIKLVSF LTGTFGQSGM ERDLKLFKIL TLVSSRGKSV IWSGKWIQFG IMDGTRIYVQ AQLSNRLRAV WGQVPVPVFK
501: LLKKLAPRNL SLGYLDLIIL FFVLEKLGSE RPTLRTSQPN CFYYRDTVRQ FIKGTDGFAG AFAECLCGSP QLYQAGGRKP WHSINFVCAH DGFTLADLVT
601: YNSKYNLSNG EDNRDGENHN LSWNCGEEGE FASLSVRRLR KRQMRNFFVC LMVSQGVPMF YMGDEYGHTK GGNNNTYCHD HYVNYFRWDK KEEQSSDLYR
701: FCRLMTKFRK ECESLGLEDF PTSERLKWHG HQPGKPDWSE ASRFVAFTMK DETKGEIYVA FNTSHLPVVV GLPERSGFRW EPVVDTGKEA PYDFLTDGLP
801: DRAVTVYQFS HFLNSNLYPM LSYSSIILVL RPDV

Best Arabidopsis Sequence Match ( AT2G39930.1 )
(BLAST)

001: MDAIKCSSSF LHHTKLNTLF SNHTFPKISA PNFKPLFRPI SISAKDRRSN EAENIAVVEK PLKSDRFFIS DGLPSPFGPT VRDDGVNFSV YSTNSVSATI
101: CLISLSDLRQ NKVTEEIQLD PSRNRTGHVW HVFLRGDFKD MLYGYRFDGK FSPEEGHYYD SSNILLDPYA KAIISRDEFG VLGPDDNCWP QMACMVPTRE
201: EEFDWEGDMH LKLPQKDLVI YEMHVRGFTR HESSKIEFPG TYQGVAEKLD HLKELGINCI ELMPCHEFNE LEYYSYNTIL GDHRVNFWGY STIGFFSPMI
301: RYASASSNNF AGRAINEFKI LVKEAHKRGI EVIMDVVLNH TAEGNEKGPI FSFRGVDNSV YYMLAPKGEF YNYSGCGNTF NCNHPVVRQF ILDCLRYWVT
401: EMHVDGFRFD LGSIMSRSSS LWDAANVYGA DVEGDLLTTG TPISCPPVID MISNDPILRG VKLIAEAWDA GGLYQVGMFP HWGIWSEWNG KFRDVVRQFI
501: KGTDGFSGAF AECLCGSPNL YQGGRKPWHS INFICAHDGF TLADLVTYNN KNNLANGEEN NDGENHNYSW NCGEEGDFAS ISVKRLRKRQ MRNFFVSLMV
601: SQGVPMIYMG DEYGHTKGGN NNTYCHDNYM NYFRWDKKEE AHSDFFRFCR ILIKFRDECE SLGLNDFPTA KRLQWHGLAP EIPNWSETSR FVAFSLVDSV
701: KKEIYVAFNT SHLATLVSLP NRPGYRWEPF VDTSKPSPYD CITPDLPERE TAMKQYRHFL DANVYPMLSY SSIILLLSPI KDP

Arabidopsis Description

ISA1ISA1 [Source:UniProtKB/TrEMBL;Acc:A0A178VW25]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.