Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- vacuole 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG35819 | Sorghum | plastid | 86.41 | 89.3 |
| Zm00001d005949_P001 | Maize | cytosol, mitochondrion, vacuole | 28.8 | 82.8 |
| HORVU5Hr1G070160.1 | Barley | plastid | 76.81 | 79.38 |
| TraesCS5B01G246400.1 | Wheat | plastid | 76.43 | 78.99 |
| TraesCS5A01G248700.1 | Wheat | plastid | 76.31 | 78.97 |
| TraesCS5D01G255800.1 | Wheat | plastid | 75.31 | 77.84 |
| Os09t0469400-01 | Rice | plastid | 31.92 | 75.52 |
| Zm00001d050508_P001 | Maize | cytosol | 4.11 | 41.77 |
| Zm00001d049753_P001 | Maize | mitochondrion, plastid | 36.53 | 35.13 |
| Zm00001d005948_P001 | Maize | golgi, plasma membrane, plastid | 14.96 | 28.71 |
| Zm00001d038121_P001 | Maize | plastid | 29.8 | 27.19 |
| Zm00001d052844_P001 | Maize | cytosol | 4.36 | 20.47 |
| Zm00001d016045_P001 | Maize | plastid | 5.74 | 12.47 |
| Zm00001d050532_P001 | Maize | extracellular | 5.86 | 11.58 |
| Zm00001d004438_P005 | Maize | plastid | 12.84 | 10.63 |
| Zm00001d024985_P004 | Maize | plastid | 2.12 | 7.56 |
Protein Annotations
| Gene3D:2.60.40.10 | Gene3D:2.60.40.1180 | MapMan:3.2.2.6 | MapMan:3.2.3.3.2.1 | Gene3D:3.20.20.80 | UniProt:A0A1D6I698 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016787 | InterPro:Glyco_hydro_13_N | InterPro:Glyco_hydro_13_cat_dom | InterPro:Glyco_hydro_b | InterPro:Glycoside_hydrolase_SF | InterPro:IPR013780 |
| InterPro:IPR013783 | InterPro:Ig-like_fold | InterPro:Ig_E-set | ProteinID:ONM55619.1 | PFAM:PF00128 | PFAM:PF02922 |
| PANTHER:PTHR43002 | SMART:SM00642 | SUPFAM:SSF51011 | SUPFAM:SSF51445 | SUPFAM:SSF81296 | UniParc:UPI000842919C |
| EnsemblPlantsGene:Zm00001d020799 | EnsemblPlants:Zm00001d020799_P003 | EnsemblPlants:Zm00001d020799_T003 | SEG:seg | : | : |
Description
isoamylase-type starch debranching enzyme3 isoamylase-type starch debranching enzyme3
Coordinates
chr7:-:133232803..133244605
Molecular Weight (calculated)
90225.6 Da
IEP (calculated)
6.902
GRAVY (calculated)
-0.400
Length
802 amino acids
Sequence
(BLAST)
(BLAST)
001: MDNHVSRRPG VPVRPFRARS PSFAETKLGI ASGCGGGGGY FGKAGVQGFD ALRSTTTKVQ SGKAGRSVTK EMGHTSSGNE VPLKYSSGKA FPLGVSQVDD
101: GLNFAIFSQH ASSVTLCLNF PERGNQDDVD IVEFALDRQK NKTGDIWHVS VEGLPASGVL YGYRINGPQG WQQGHRFDDS VILLDPYAKL VYGRKHFAVE
201: KEKPSQLFGT YDFDSSPFDW GDNYKLPNLP ETDLVIYEMN VRAFTADESS RLAPAIRGSY LGVIDKIPHL LELGVNAVEL LPVFEFDELE LKRFPNPRDH
301: MVNTWGYSTI NFFAPMSRYA SAGGGPVAAS KELKQMVKAF HNSGIEVILD VVYNHTNEAD DVNPYMTSFR GIDNKVYYML DLNNSAQLLN FSGCGNTLNC
401: NHPVVKELVL DSLRHWVKEY HIDGFRFDLA SVLCRGPDGS PLDAPPLIKE IAKDSVLSRC KIIAEPWDCG GLYLVGRFPN WDRWAEWNGK YRDDIRRFIK
501: GDPGMKGVFA TRVSGSADLY QVLLCYFFIG ILVNNRKPYH SVNFVIAHDG FTLCDLVSYN SKHNDANGEG GRDGCNDNYS WNCGIEGETN DLNVLSLRSR
601: QMKNFHVALM ISQGTPMMLM GDEYGHTRYG NNNSYGHDTH INNFQWGQLE ERKDGHFRFF SEMIKFRHNH PILRRDRFLN KNDVTWHENR WENQDSKFLA
701: FTIHDHSSGG DIYLAFNAHE YFVDAVIPPP PHHKSWSRVV WILSDSANMF IPSNLLFSPR MFKCQVDTNL ESPKDIVPEG VPFTGSGYRI APYSSILLKA
801: KP
101: GLNFAIFSQH ASSVTLCLNF PERGNQDDVD IVEFALDRQK NKTGDIWHVS VEGLPASGVL YGYRINGPQG WQQGHRFDDS VILLDPYAKL VYGRKHFAVE
201: KEKPSQLFGT YDFDSSPFDW GDNYKLPNLP ETDLVIYEMN VRAFTADESS RLAPAIRGSY LGVIDKIPHL LELGVNAVEL LPVFEFDELE LKRFPNPRDH
301: MVNTWGYSTI NFFAPMSRYA SAGGGPVAAS KELKQMVKAF HNSGIEVILD VVYNHTNEAD DVNPYMTSFR GIDNKVYYML DLNNSAQLLN FSGCGNTLNC
401: NHPVVKELVL DSLRHWVKEY HIDGFRFDLA SVLCRGPDGS PLDAPPLIKE IAKDSVLSRC KIIAEPWDCG GLYLVGRFPN WDRWAEWNGK YRDDIRRFIK
501: GDPGMKGVFA TRVSGSADLY QVLLCYFFIG ILVNNRKPYH SVNFVIAHDG FTLCDLVSYN SKHNDANGEG GRDGCNDNYS WNCGIEGETN DLNVLSLRSR
601: QMKNFHVALM ISQGTPMMLM GDEYGHTRYG NNNSYGHDTH INNFQWGQLE ERKDGHFRFF SEMIKFRHNH PILRRDRFLN KNDVTWHENR WENQDSKFLA
701: FTIHDHSSGG DIYLAFNAHE YFVDAVIPPP PHHKSWSRVV WILSDSANMF IPSNLLFSPR MFKCQVDTNL ESPKDIVPEG VPFTGSGYRI APYSSILLKA
801: KP
001: MLTSPSSSST YDPFSSNFSP SLTNAFSSSF TIPMGLKLSR RVTRARIFSR KIKDRSTLKV TCRRAHERVV EEEASTMTET KLFKVSSGEV SPLGVSQVDK
101: GINFALFSQN ATSVTLCLSL SQSGKDDTDD DGMIELVLDP SVNKTGDTWH ICVEDLPLNN VLYGYRVDGP GEWQQGHRFD RSILLLDPYA KLVKGHSSFG
201: DSSQKFAQFY GTYDFESSPF DWGDDYKFPN IPEKDLVIYE MNVRAFTADE SSGMDPAIGG SYLGFIEKIP HLQDLGINAV ELLPVFEFDE LELQRRSNPR
301: DHMVNTWGYS TVNFFAPMSR YASGEGDPIK ASKEFKEMVK ALHSAGIEVI LDVVYNHTNE ADDKYPYTTS FRGIDNKVYY MLDPNNQLLN FSGCGNTLNC
401: NHPVVMELIL DSLRHWVTEY HVDGFRFDLA SVLCRATDGS PLSAPPLIRA IAKDSVLSRC KIIAEPWDCG GLYLVGKFPN WDRWAEWNGM YRDDVRRFIK
501: GDSGMKGSFA TRVSGSSDLY QVNQRKPYHG VNFVIAHDGF TLRDLVSYNF KHNEANGEGG NDGCNDNHSW NCGFEGETGD AHIKSLRTRQ MKNFHLALMI
601: SQGTPMMLMG DEYGHTRYGN NNSYGHDTSL NNFQWKELDA KKQNHFRFFS EVIKFRHSHH VLKHENFLTQ GEITWHEDNW DNSESKFLAF TLHDGIGGRD
701: IYVAFNAHDY FVKALIPQPP PGKQWFRVAD TNLESPDDFV REGVAGVADT YNVAPFSSIL LQSK
101: GINFALFSQN ATSVTLCLSL SQSGKDDTDD DGMIELVLDP SVNKTGDTWH ICVEDLPLNN VLYGYRVDGP GEWQQGHRFD RSILLLDPYA KLVKGHSSFG
201: DSSQKFAQFY GTYDFESSPF DWGDDYKFPN IPEKDLVIYE MNVRAFTADE SSGMDPAIGG SYLGFIEKIP HLQDLGINAV ELLPVFEFDE LELQRRSNPR
301: DHMVNTWGYS TVNFFAPMSR YASGEGDPIK ASKEFKEMVK ALHSAGIEVI LDVVYNHTNE ADDKYPYTTS FRGIDNKVYY MLDPNNQLLN FSGCGNTLNC
401: NHPVVMELIL DSLRHWVTEY HVDGFRFDLA SVLCRATDGS PLSAPPLIRA IAKDSVLSRC KIIAEPWDCG GLYLVGKFPN WDRWAEWNGM YRDDVRRFIK
501: GDSGMKGSFA TRVSGSSDLY QVNQRKPYHG VNFVIAHDGF TLRDLVSYNF KHNEANGEGG NDGCNDNHSW NCGFEGETGD AHIKSLRTRQ MKNFHLALMI
601: SQGTPMMLMG DEYGHTRYGN NNSYGHDTSL NNFQWKELDA KKQNHFRFFS EVIKFRHSHH VLKHENFLTQ GEITWHEDNW DNSESKFLAF TLHDGIGGRD
701: IYVAFNAHDY FVKALIPQPP PGKQWFRVAD TNLESPDDFV REGVAGVADT YNVAPFSSIL LQSK
Arabidopsis Description
ISA3Isoamylase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M0S5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.