CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020799_P003	Maize	mitochondrion	89.3	86.41
Zm00001d005949_P001	Maize	cytosol, mitochondrion, vacuole	30.15	83.87
TraesCS5A01G248700.1	Wheat	plastid	79.12	79.23
TraesCS5D01G255800.1	Wheat	plastid	78.87	78.87
Os09t0469400-01	Rice	plastid	34.41	78.76
HORVU5Hr1G070160.1	Barley	plastid	78.48	78.48
TraesCS5B01G246400.1	Wheat	plastid	78.22	78.22
PGSC0003DMT400018765	Potato	cytosol	22.04	74.67
GSMUA_Achr9P14980_001	Banana	cytosol	68.04	73.85
CDY05042	Canola	cytosol	24.61	69.45
Bra000667.1-P	Field mustard	plastid	62.76	67.64
CDX90708	Canola	plastid	65.46	67.55
Solyc06g009220.2.1	Tomato	plastid	64.05	67.25
VIT_18s0001g06520.t01	Wine grape	plastid	66.75	66.84
AT4G09020.1	Thale cress	plastid	65.72	66.75
KRH53006	Soybean	plastid	66.11	66.45
KRH62296	Soybean	plastid	66.88	66.28
CDY70211	Canola	plastid	46.52	65.4
CDX77333	Canola	cytosol	8.12	60.0
CDX77349	Canola	mitochondrion	28.48	56.67
Bra014108.1-P	Field mustard	cytosol	15.08	56.52
PGSC0003DMT400018766	Potato	cytosol	17.91	56.28
Bra014111.1-P	Field mustard	mitochondrion	10.31	55.94
CDY60217	Canola	extracellular	10.05	45.35
KXG25605	Sorghum	plastid	41.37	40.53
OQU77947	Sorghum	plastid	32.09	31.12
KXG25811	Sorghum	plastid	13.53	10.89

Protein Annotations

Gene3D:2.60.40.10	Gene3D:2.60.40.1180	MapMan:3.2.2.6	MapMan:3.2.3.3.2.1	Gene3D:3.20.20.80	UniProt:A0A1B6QD19
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0005977	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	InterPro:Glyco_hydro_13_N	InterPro:Glyco_hydro_13_cat_dom
InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780	InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:Ig_E-set
ProteinID:KXG35817.1	ProteinID:KXG35818.1	EnsemblPlants:KXG35819	ProteinID:KXG35819	ProteinID:KXG35819.1	PFAM:PF00128
PFAM:PF02922	PANTHER:PTHR43002	SMART:SM00642	EnsemblPlantsGene:SORBI_3002G233600	SUPFAM:SSF51011	SUPFAM:SSF51445
SUPFAM:SSF81296	UniParc:UPI0001C80E2B	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:62457138..62468227

Molecular Weight (calculated)

86915.2 Da

IEP (calculated)

6.751

GRAVY (calculated)

-0.462

Length

776 amino acids

Sequence
(BLAST)

001: MDSVGTNRPP LRSVAAAVTR RSALLCPPRH LGLGNRFAET KLGIASGCGG GGYFGKVQRF NALRNTTTKV QSGKAGSSVT KEMGHTSSGS EVPLKYSSGK
101: AFPLGVSQVD DGLNFAIFSQ HASSVTLCLK LHERGTQDDA DIVEFPLDRQ KNKTGDIWHV SVEGLPASGV LYGYRINGPQ GWQQGHRFDD SVILLDPYAK
201: LVSGRKHFAV EEEKPSQLFG TYDFDSSPFD WGDNYRLPNL PETDLVIYEM NVRAFTADES SRLGPAFRGS YLGVIDKIPH LLELGVNAVE LLPVFEFDEL
301: ELKRFPNPRD HMVNTWGYST INFFAPMSRY ASAGGGPVAA SKELKQMVKA FHNAGIEVIL DVVYNHTNEA DDANPYVTSF RGIDNKVYYM LDLNNNAQLL
401: NFSGCGNTLN CNHPVVKELV LDSLRHWVTE YHIDGFRFDL ASVLCRGPDG SPLDAPPLIK EIAKDSVLSR CKIIAEPWDC GGLYLVGKFP NWDRWAEWNG
501: KYRDDIRRFI KGDPGMKGVF ATRVSGSADL YQVNNRKPYH SVNFVIAHDG FTLCDLVSYN SKHNDANGEG GRDGCNDNDS WNCGIEGETN DLNVLSIRSR
601: QMKNFHVALM ISQGTPMMLM GDEYGHTRYG NNNSYGHDTH INNFQWGQLE ERKDGHFRFF SEMIKFRRNH PILRRDRFLN KNDITWHENN WENQDSKFLA
701: FTIHDHNSGG DIYLAFNAHE YFVDAVIPPP PQHKSWSRVV DTNLESPKDI VPEGVPFTGS GYRIAPYSSI LLKAKP

Best Arabidopsis Sequence Match ( AT4G09020.1 )
(BLAST)

001: MLTSPSSSST YDPFSSNFSP SLTNAFSSSF TIPMGLKLSR RVTRARIFSR KIKDRSTLKV TCRRAHERVV EEEASTMTET KLFKVSSGEV SPLGVSQVDK
101: GINFALFSQN ATSVTLCLSL SQSGKDDTDD DGMIELVLDP SVNKTGDTWH ICVEDLPLNN VLYGYRVDGP GEWQQGHRFD RSILLLDPYA KLVKGHSSFG
201: DSSQKFAQFY GTYDFESSPF DWGDDYKFPN IPEKDLVIYE MNVRAFTADE SSGMDPAIGG SYLGFIEKIP HLQDLGINAV ELLPVFEFDE LELQRRSNPR
301: DHMVNTWGYS TVNFFAPMSR YASGEGDPIK ASKEFKEMVK ALHSAGIEVI LDVVYNHTNE ADDKYPYTTS FRGIDNKVYY MLDPNNQLLN FSGCGNTLNC
401: NHPVVMELIL DSLRHWVTEY HVDGFRFDLA SVLCRATDGS PLSAPPLIRA IAKDSVLSRC KIIAEPWDCG GLYLVGKFPN WDRWAEWNGM YRDDVRRFIK
501: GDSGMKGSFA TRVSGSSDLY QVNQRKPYHG VNFVIAHDGF TLRDLVSYNF KHNEANGEGG NDGCNDNHSW NCGFEGETGD AHIKSLRTRQ MKNFHLALMI
601: SQGTPMMLMG DEYGHTRYGN NNSYGHDTSL NNFQWKELDA KKQNHFRFFS EVIKFRHSHH VLKHENFLTQ GEITWHEDNW DNSESKFLAF TLHDGIGGRD
701: IYVAFNAHDY FVKALIPQPP PGKQWFRVAD TNLESPDDFV REGVAGVADT YNVAPFSSIL LQSK

Arabidopsis Description

ISA3Isoamylase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M0S5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.