CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH53006	Soybean	plastid	90.55	91.84
VIT_18s0001g06520.t01	Wine grape	plastid	74.07	74.84
PGSC0003DMT400018765	Potato	cytosol	21.2	72.49
CDY05042	Canola	cytosol	25.42	72.36
GSMUA_Achr9P14980_001	Banana	cytosol	66.03	72.31
KRH62892	Soybean	mitochondrion	8.05	71.59
AT4G09020.1	Thale cress	plastid	68.71	70.42
Bra000667.1-P	Field mustard	plastid	63.86	69.44
CDX90708	Canola	plastid	66.67	69.41
Solyc06g009220.2.1	Tomato	plastid	65.26	69.15
Os09t0469400-01	Rice	plastid	29.5	68.14
KXG35819	Sorghum	plastid	66.28	66.88
CDY70211	Canola	plastid	47.0	66.67
TraesCS5D01G255800.1	Wheat	plastid	64.5	65.08
TraesCS5B01G246400.1	Wheat	plastid	64.11	64.69
HORVU5Hr1G070160.1	Barley	plastid	63.98	64.56
TraesCS5A01G248700.1	Wheat	plastid	63.6	64.26
CDX77333	Canola	cytosol	8.3	61.9
Bra014108.1-P	Field mustard	cytosol	16.09	60.87
PGSC0003DMT400018766	Potato	cytosol	18.52	58.7
CDX77349	Canola	mitochondrion	29.12	58.46
Bra014111.1-P	Field mustard	mitochondrion	10.6	58.04
CDY60217	Canola	extracellular	10.73	48.84
KRH41413	Soybean	plastid	40.49	39.72
KRG95479	Soybean	mitochondrion	31.8	28.79
KRH67160	Soybean	plastid	31.55	28.52
Zm00001d005948_P001	Maize	golgi, plasma membrane, plastid	12.52	23.45
KRH34652	Soybean	plastid	14.69	12.09

Protein Annotations

EntrezGene:100807545	Gene3D:2.60.40.10	Gene3D:2.60.40.1180	MapMan:3.2.2.6	MapMan:3.2.3.3.2.1	Gene3D:3.20.20.80
EMBL:ACUP02002232	EnsemblPlantsGene:GLYMA_04G098900	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_13_N	InterPro:Glyco_hydro_13_cat_dom	InterPro:Glyco_hydro_b
InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780	InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:Ig_E-set	UniProt:K7KJ81
EnsemblPlants:KRH62296	ProteinID:KRH62296	ProteinID:KRH62296.1	PFAM:PF00128	PFAM:PF02922	PANTHER:PTHR43002
SMART:SM00642	SUPFAM:SSF51011	SUPFAM:SSF51445	SUPFAM:SSF81296	UniParc:UPI0002339957	:

Description

hypothetical protein

Coordinates

chr4:-:8992708..9013158

Molecular Weight (calculated)

88233.8 Da

IEP (calculated)

6.349

GRAVY (calculated)

-0.379

Length

783 amino acids

Sequence
(BLAST)

001: MLHHPFLYAS KIATQSTLFP PVSSAGNSAG RSSLAGNSSA RDVRSLRFMK QASGSKSNNE LGVFSETMDR ARHRTTTVYG GRAQEGVLEE ETSKVIESRP
101: SWKVFPGQAF PLGVSEVDNC MNFAIFSQHA TAVTLCLVLP ERGSIDALDG GMIEMVLDPD LNKTGDIWHI CIEDLPRSNV LYGYRIDGPG DRGKGHRFDS
201: SIVLVDPYAK LVEGRRYFGD ISLKLSKFLG TYDFDSLPFD WGENYKLPNI SEKDLVIYEM NVRAFTSDES SGLDSNIRGS YLGVIEKIPH LLELGINAVE
301: LLPVFEFDEL EFQRFPNPRD HMINTWGYST INFFAPMSRY ASAGGGSVNA SREFKQMVKA LHSAGIEVIL DVVYNHTNEA DDAFPYTTSF RGIDNKVYYM
401: MDNNGQLLNF SGCGNTLNCN HPVVMELILD SLRHWVTEYH VDGFRFDLAS VLCRGIDGSP INAPPLIRAI AKDAVLSRCK IIAEPWDCGG LYLVGSFPNW
501: DRWAEWNGKY RDDVRKFIKG DSGVKGSFAT RVAGSSDLYR VNNRRPYHSI NFVIAHDGFT LRDLVSYNFK HNKANGEGGK DGSNDNFSWN CGFEGETDDA
601: SIRALRSRQM KNFHLALMIS QGTPMMLMGD EYGHTRYGNN NSYGHDTAIN NFLWDQLDAR KSDHFRFFSK VIKYRHAHEV FSRENFLNTN DITWHEDNWE
701: NPDSKFLAFT LHDRSGGDIY VAFNSHDYFV KVLLPTPPKK RNWFRVADTN LKSPDDFVLD GVPSVGNTYN IAPYSSILLE AKF

Best Arabidopsis Sequence Match ( AT4G09020.1 )
(BLAST)

001: MLTSPSSSST YDPFSSNFSP SLTNAFSSSF TIPMGLKLSR RVTRARIFSR KIKDRSTLKV TCRRAHERVV EEEASTMTET KLFKVSSGEV SPLGVSQVDK
101: GINFALFSQN ATSVTLCLSL SQSGKDDTDD DGMIELVLDP SVNKTGDTWH ICVEDLPLNN VLYGYRVDGP GEWQQGHRFD RSILLLDPYA KLVKGHSSFG
201: DSSQKFAQFY GTYDFESSPF DWGDDYKFPN IPEKDLVIYE MNVRAFTADE SSGMDPAIGG SYLGFIEKIP HLQDLGINAV ELLPVFEFDE LELQRRSNPR
301: DHMVNTWGYS TVNFFAPMSR YASGEGDPIK ASKEFKEMVK ALHSAGIEVI LDVVYNHTNE ADDKYPYTTS FRGIDNKVYY MLDPNNQLLN FSGCGNTLNC
401: NHPVVMELIL DSLRHWVTEY HVDGFRFDLA SVLCRATDGS PLSAPPLIRA IAKDSVLSRC KIIAEPWDCG GLYLVGKFPN WDRWAEWNGM YRDDVRRFIK
501: GDSGMKGSFA TRVSGSSDLY QVNQRKPYHG VNFVIAHDGF TLRDLVSYNF KHNEANGEGG NDGCNDNHSW NCGFEGETGD AHIKSLRTRQ MKNFHLALMI
601: SQGTPMMLMG DEYGHTRYGN NNSYGHDTSL NNFQWKELDA KKQNHFRFFS EVIKFRHSHH VLKHENFLTQ GEITWHEDNW DNSESKFLAF TLHDGIGGRD
701: IYVAFNAHDY FVKALIPQPP PGKQWFRVAD TNLESPDDFV REGVAGVADT YNVAPFSSIL LQSK

Arabidopsis Description

ISA3Isoamylase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M0S5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.