CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 5
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH67160	Soybean	plastid	85.66	85.57
VIT_07s0104g00370.t01	Wine grape	plasma membrane, plastid, vacuole	59.19	58.05
CDY15458	Canola	cytosol	46.82	55.25
Bra030528.1-P	Field mustard	cytosol	46.94	55.16
GSMUA_Achr6P16200_001	Banana	cytosol, plasma membrane, vacuole	32.14	54.62
HORVU1Hr1G062690.3	Barley	cytosol	44.05	52.99
CDX89902	Canola	plastid	51.45	52.85
GSMUA_Achr6P16190_001	Banana	cytosol, plasma membrane, vacuole	45.78	52.38
AT1G03310.2	Thale cress	plastid	53.29	52.27
PGSC0003DMT400002502	Potato	plastid	52.49	51.71
Bra033388.1-P	Field mustard	plastid	50.29	51.3
Os05t0393700-01	Rice	cytosol, plastid	43.93	51.14
CDY18165	Canola	plastid	48.32	51.1
Solyc09g064800.1.1	Tomato	plastid	50.98	50.92
TraesCS1A01G247100.1	Wheat	mitochondrion, plastid	45.32	49.43
OQU77947	Sorghum	plastid	45.66	49.38
TraesCS1D01G246300.1	Wheat	plastid	44.62	48.92
TraesCS1B01G257700.1	Wheat	mitochondrion, plastid	44.39	48.73
CDX86680	Canola	plastid	46.59	48.67
Zm00001d038121_P001	Maize	plastid	43.93	43.23
KRH53006	Soybean	plastid	29.02	32.51
KRH62296	Soybean	plastid	28.79	31.8
KRH41413	Soybean	plastid	25.32	27.44
KRH62892	Soybean	mitochondrion	2.77	27.27
KRH34652	Soybean	plastid	11.68	10.62

Protein Annotations

EntrezGene:100777953	Gene3D:2.60.40.10	Gene3D:2.60.40.1180	MapMan:3.2.2.6	MapMan:3.2.3.3.2.1	Gene3D:3.20.20.80
EMBL:ACUP02012113	EnsemblPlantsGene:GLYMA_19G153700	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_13_N	InterPro:Glyco_hydro_13_cat_dom	InterPro:Glyco_hydro_b
InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780	InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:Ig_E-set	UniProt:K7MYJ2
EnsemblPlants:KRG95479	ProteinID:KRG95479	ProteinID:KRG95479.1	PFAM:PF00128	PFAM:PF02922	PANTHER:PTHR43002
PANTHER:PTHR43002:SF2	SMART:SM00642	SUPFAM:SSF51011	SUPFAM:SSF51445	SUPFAM:SSF81296	UniParc:UPI000233ED1D
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr19:-:41386436..41389033

Molecular Weight (calculated)

96479.2 Da

IEP (calculated)

6.643

GRAVY (calculated)

-0.106

Length

865 amino acids

Sequence
(BLAST)

001: MAILAPRFSF SVIPRNHHKL KRSFSHKPFI QRKQLWHQLG LQSLVSPFSL NPTSSKLCAT SRLSIEETEQ QIGTLTRPED LKGSLAYLFR TETGGGLVKV
101: HVTRRNDRYS VYIEISSLDI SGGVGEALLL CWGVYRSDSS CFVDLDTIGL SENAAMGMNV SPLVQNSDGK FAIELEFDAK HVPLYLSFFL MSSLDSGLEI
201: RSHRRTNFCM PVGSLPGYPC PLGVSYSPDG SVNFSIFSRH AESVVLCLYD ENGVEKPALE LDLDPYVNRT GDIWHVSFES AKGFVSYGYR CRRGVLKKNK
301: DDGFAEHVVL DPYAKIVGNS YPDGVGLVKN LGCLRKEPFF DWGGDRHPDL SMEKLVVYRL NVKRFTQHES SQLPSGLAGT FTGLAKKVQH FKDLGVNAVL
401: LEPVFTFDEK KGPYFPCHFF SLMHIYGPSG GPVSAIAAMK EMVKTMHANG IEVLVEVVFS NTAEIGAIQG IDDSSYYYAN GVGGLKVQSA LNCNYPIVQN
501: LILDSLRHWV TEFHIDGFSF INASHLLRGF HGEYLSRPPL VEAIAFDPVL SKTKIIADCW DPHGMVAKEI RFPHWMRWAE MNTHFCNDVR NFLRGQNLLS
601: DLATRLCGSG DIFSGGRGPG FSFNYIARNF GVSLVDLVSF SSVDELSWNC GAEGPTNNTA VLERRLKQIR NFLFILFVSL GVPVLNMGDE CGQSSGGFTA
701: YDGIKPFSWS ALKTGFGKQT SEFIFFLSSL RKRRSYLLQR RSFLKEENIE WYGSDGDPPR WEDPSCKFLA MILKAEVTEF LESSVSSDIS GDLFIAFNAT
801: DHPETAVLPL PPEGMSWYRL VDTALPFPGF FSTSGEVVPE QTEGLFTYQV KSYSCTLFEA NNRTI

Best Arabidopsis Sequence Match ( AT1G03310.2 )
(BLAST)

001: MAAWSPSVGI GSCCLNNGIT RTWKFPSARL FTGRKNKIKL GSETLMFTRK RFMGDLVTSA LQSYQFSKIC ASKTSIELRE ALSSRRAEAD DLKKVTSYSF
101: RTKAGALVKV KVEKKREKYS ILVYVSSLEL SGDDKSRLVM VWGVYRSDSS CFLPLDFENS SQDSQTHTTE TTFVKSSLSE LMLGLEFDGK ESPFYLSFHL
201: KLVSGRDPDG QEMLTHRDTD FCIPVGFTAG HPLPLGLSSG PDDDSWNFSF FSRSSTNVVL CLYDDSTTDK PALELDLDPY VNRTGDVWHA SVDNTWDFVR
301: YGYRCKETAH SKEDVDVEGE PIVLDPYATV VGKSVSQKYL GSLSKSPSFD WGEDVSPNIP LEKLLVYRLN VKGFTQHRSS KLPSNVAGTF SGVAEKVSHL
401: KTLGTNAVLL EPIFSFSEQK GPYFPFHFFS PMDIYGPSNS LESAVNSMKV MVKKLHSEGI EVLLEVVFTH TADSGALRGI DDSSYYYKGR ANDLDSKSYL
501: NCNYPVVQQL VLESLRYWVT EFHVDGFCFI NASSLLRGVH GEQLSRPPLV EAIAFDPLLA ETKLIADCWD PLEMMPKEVR FPHWKRWAEL NTRYCRNVRN
601: FLRGRGVLSD LATRICGSGD VFTDGRGPAF SFNYISRNSG LSLVDIVSFS GPELASELSW NCGEEGATNK SAVLQRRLKQ IRNFLFIQYI SLGVPVLNMG
701: DECGISTRGS PLLESRKPFD WNLLASAFGT QITQFISFMT SVRARRSDVF QRRDFLKPEN IVWYANDQTT PKWEDPASKF LALEIKSESE EEETASLAEP
801: NEPKSNDLFI GFNASDHPES VVLPSLPDGS KWRRLVDTAL PFPGFFSVEG ETVVAEEPLQ QLVVYEMKPY SCTLFETINT TA

Arabidopsis Description

ISA2ISA2 [Source:UniProtKB/TrEMBL;Acc:A0A178WGA8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.