Factsheet for Solyc09g064800.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
mitochondrion 1
vacuole 1
plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400002502	Potato	plastid	86.03	84.85
VIT_07s0104g00370.t01	Wine grape	plasma membrane, plastid, vacuole	55.66	54.65
Bra030528.1-P	Field mustard	cytosol	45.03	52.99
CDY15458	Canola	cytosol	44.23	52.25
KRH67160	Soybean	plastid	51.85	51.85
GSMUA_Achr6P16190_001	Banana	cytosol, plasma membrane, vacuole	44.8	51.32
GSMUA_Achr6P16200_001	Banana	cytosol, plasma membrane, vacuole	30.14	51.28
KRG95479	Soybean	mitochondrion	50.92	50.98
HORVU1Hr1G062690.3	Barley	cytosol	42.03	50.63
CDX89902	Canola	plastid	48.73	50.12
Os05t0393700-01	Rice	cytosol, plastid	41.8	48.72
TraesCS1D01G246300.1	Wheat	plastid	44.11	48.42
AT1G03310.2	Thale cress	plastid	49.19	48.3
TraesCS1A01G247100.1	Wheat	mitochondrion, plastid	44.23	48.3
TraesCS1B01G257700.1	Wheat	mitochondrion, plastid	43.88	48.22
Bra033388.1-P	Field mustard	plastid	47.0	48.0
CDY18165	Canola	plastid	45.03	47.68
OQU77947	Sorghum	plastid	43.53	47.12
CDX86680	Canola	plastid	44.8	46.86
Zm00001d038121_P001	Maize	plastid	43.19	42.55
Solyc06g009220.2.1	Tomato	plastid	25.75	30.18
Solyc07g014590.2.1	Tomato	extracellular	25.29	27.83
Solyc11g008060.1.1	Tomato	plastid	5.2	14.71
Solyc11g008050.1.1	Tomato	cytosol	7.39	14.0
Solyc11g008040.1.1	Tomato	mitochondrion	1.39	9.84

Protein Annotations

Gene3D:2.60.40.10	Gene3D:2.60.40.1180	MapMan:3.2.2.6	MapMan:3.2.3.3.2.1	Gene3D:3.20.20.80	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005975	GO:GO:0005977	GO:GO:0005983	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987
GO:GO:0010021	GO:GO:0016787	GO:GO:0019156	GO:GO:0043033	InterPro:Glyco_hydro_13_N	InterPro:Glyco_hydro_13_cat_dom
InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780	InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:Ig_E-set
UniProt:K4CUA7	PFAM:PF00128	PFAM:PF02922	PANTHER:PTHR43002	PANTHER:PTHR43002:SF2	SMART:SM00642
SUPFAM:SSF51011	SUPFAM:SSF51445	SUPFAM:SSF81296	EnsemblPlantsGene:Solyc09g064800.1	EnsemblPlants:Solyc09g064800.1.1	UniParc:UPI000276C324

Description

Isoamylase 2, chloroplastic [Source:Projected from Arabidopsis thaliana (AT1G03310) UniProtKB/Swiss-Prot;Acc:Q8L735]

Coordinates

chr9:-:62209026..62211626

Molecular Weight (calculated)

96552.4 Da

IEP (calculated)

5.757

GRAVY (calculated)

-0.161

Length

866 amino acids

Sequence
(BLAST)

001: METSPIQLAV HSRLLSYGST ESTKLVPASS GNRGKIVCSL RKLELEDMNF SGISRNNDQE APRRAHRLKA LSGSRISLVP SAKRVPTYLF RTDIGCQVKV
101: FVEKTNGKYK VLVEVLPLEL SDAHSELVMV WGLFRSDASC FMPLDLNRRG ADGKSSTVET PFVQGPSGKV TVELDFEVSL VPFYISFYMK SQLVSDMENS
201: EIRSHRNTNF VVPVGLSSGH PAPLGISFQP DGYVNFALYS RSAKGVVLCL YDDISVEKPS LEIDLDPYIN QSGDIWHAAL DCSLPFKTYG YRFKAATSGK
301: GELVLLDPYA KVIRSVIPRQ GGSEIRPKYL GELCLEPGYD WSGDVPPSLP MEKLIIYRIN VTHFTKDKSS KLPDNLAGTF SGISEKWHHL KDLGVNAMLL
401: EPIFPFDEQK GPYYPWHFFS PGNMYGPSGD PLSVIKSMKD MVKKLHANGI EVFLEVVFTH TAEDAPLMNV DNFSYCIKGS QDMNIQNALN CNYPIVQQMI
501: LDCLRHWVIE FHIDGFVFVD ASSLLRGFNG EILSRPPLVE AIAFDPILSK AKMIADNWNP LTNDSTENLF PHWRRWAEIN MRFCDDIRDF LRGEGLLSNL
601: ATRLCGSGDI FAGGRGPAFS FNYIARNSGL TLVDLVSFSN SEVASELSWN CGQEGATTNS IVLERRLKQV RNFLFILFIS LGVPVLNMGD ECGQSSGGSP
701: AYDARKSLNW NTLKTGFGTQ IAQFISFLSN LRMRRSDLLQ KRNFLKEENI QWHGSDQSPP VWDDPSSKFL AMTLKADAEV SHTLLSDIGG DLFVAFNGAG
801: DSESVILPPP PTDMVWYRLV DTALPFPGFF DEKGTPVEDE LVAYEMKSHS CVLFEAQRLT EIDSSK

Best Arabidopsis Sequence Match ( AT1G03310.2 )
(BLAST)

001: MAAWSPSVGI GSCCLNNGIT RTWKFPSARL FTGRKNKIKL GSETLMFTRK RFMGDLVTSA LQSYQFSKIC ASKTSIELRE ALSSRRAEAD DLKKVTSYSF
101: RTKAGALVKV KVEKKREKYS ILVYVSSLEL SGDDKSRLVM VWGVYRSDSS CFLPLDFENS SQDSQTHTTE TTFVKSSLSE LMLGLEFDGK ESPFYLSFHL
201: KLVSGRDPDG QEMLTHRDTD FCIPVGFTAG HPLPLGLSSG PDDDSWNFSF FSRSSTNVVL CLYDDSTTDK PALELDLDPY VNRTGDVWHA SVDNTWDFVR
301: YGYRCKETAH SKEDVDVEGE PIVLDPYATV VGKSVSQKYL GSLSKSPSFD WGEDVSPNIP LEKLLVYRLN VKGFTQHRSS KLPSNVAGTF SGVAEKVSHL
401: KTLGTNAVLL EPIFSFSEQK GPYFPFHFFS PMDIYGPSNS LESAVNSMKV MVKKLHSEGI EVLLEVVFTH TADSGALRGI DDSSYYYKGR ANDLDSKSYL
501: NCNYPVVQQL VLESLRYWVT EFHVDGFCFI NASSLLRGVH GEQLSRPPLV EAIAFDPLLA ETKLIADCWD PLEMMPKEVR FPHWKRWAEL NTRYCRNVRN
601: FLRGRGVLSD LATRICGSGD VFTDGRGPAF SFNYISRNSG LSLVDIVSFS GPELASELSW NCGEEGATNK SAVLQRRLKQ IRNFLFIQYI SLGVPVLNMG
701: DECGISTRGS PLLESRKPFD WNLLASAFGT QITQFISFMT SVRARRSDVF QRRDFLKPEN IVWYANDQTT PKWEDPASKF LALEIKSESE EEETASLAEP
801: NEPKSNDLFI GFNASDHPES VVLPSLPDGS KWRRLVDTAL PFPGFFSVEG ETVVAEEPLQ QLVVYEMKPY SCTLFETINT TA

Arabidopsis Description

ISA2ISA2 [Source:UniProtKB/TrEMBL;Acc:A0A178WGA8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.