Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G247100.1 | Wheat | mitochondrion, plastid | 88.6 | 80.33 |
| TraesCS1B01G257700.1 | Wheat | mitochondrion, plastid | 87.48 | 79.82 |
| TraesCS1D01G246300.1 | Wheat | plastid | 87.07 | 79.34 |
| Os05t0393700-01 | Rice | cytosol, plastid | 75.1 | 72.68 |
| OQU77947 | Sorghum | plastid | 76.08 | 68.38 |
| Zm00001d038121_P001 | Maize | plastid | 74.97 | 61.32 |
| GSMUA_Achr6P16200_001 | Banana | cytosol, plasma membrane, vacuole | 38.25 | 54.03 |
| GSMUA_Achr6P16190_001 | Banana | cytosol, plasma membrane, vacuole | 52.99 | 50.4 |
| Bra030528.1-P | Field mustard | cytosol | 50.49 | 49.32 |
| CDY15458 | Canola | cytosol | 49.93 | 48.98 |
| KRG95479 | Soybean | mitochondrion | 52.99 | 44.05 |
| VIT_07s0104g00370.t01 | Wine grape | plasma membrane, plastid, vacuole | 53.27 | 43.42 |
| CDY18165 | Canola | plastid | 49.24 | 43.28 |
| KRH67160 | Soybean | plastid | 52.02 | 43.19 |
| CDX89902 | Canola | plastid | 49.51 | 42.28 |
| Solyc09g064800.1.1 | Tomato | plastid | 50.63 | 42.03 |
| Bra033388.1-P | Field mustard | plastid | 49.51 | 41.98 |
| PGSC0003DMT400002502 | Potato | plastid | 50.9 | 41.69 |
| AT1G03310.2 | Thale cress | plastid | 50.07 | 40.82 |
| CDX86680 | Canola | plastid | 46.73 | 40.58 |
| HORVU5Hr1G070160.1 | Barley | plastid | 32.96 | 30.54 |
| HORVU7Hr1G051710.1 | Barley | vacuole | 19.33 | 27.58 |
| HORVU7Hr1G027860.4 | Barley | cytosol, vacuole | 13.07 | 10.32 |
Protein Annotations
| Gene3D:2.60.40.10 | Gene3D:2.60.40.1180 | MapMan:3.2.2.6 | MapMan:3.2.3.3.2.1 | Gene3D:3.20.20.80 | UniProt:A0A287FX27 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005975 | GO:GO:0005977 | GO:GO:0005983 | GO:GO:0006091 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 |
| GO:GO:0010021 | GO:GO:0016787 | GO:GO:0019156 | GO:GO:0043033 | InterPro:Glyco_hydro_13_N | InterPro:Glyco_hydro_13_cat_dom |
| InterPro:Glyco_hydro_b | InterPro:Glycoside_hydrolase_SF | EnsemblPlantsGene:HORVU1Hr1G062690 | EnsemblPlants:HORVU1Hr1G062690.3 | InterPro:IPR013780 | InterPro:IPR013783 |
| InterPro:Ig-like_fold | InterPro:Ig_E-set | PFAM:PF00128 | PFAM:PF02922 | PANTHER:PTHR43002 | PANTHER:PTHR43002:SF2 |
| SMART:SM00642 | SUPFAM:SSF51011 | SUPFAM:SSF51445 | SUPFAM:SSF81296 | UniParc:UPI000B485159 | SEG:seg |
Description
No Description!
Coordinates
chrchr1H:+:451162873..451165216
Molecular Weight (calculated)
78285.9 Da
IEP (calculated)
5.848
GRAVY (calculated)
-0.060
Length
719 amino acids
Sequence
(BLAST)
(BLAST)
001: HIPRSXGSGE AVPLAPPGDG ACPAAELSFQ ASRAPFCLSF LLTDDEGAEI RTHRGTAFRV PVGVGPGSPA PLGLSLSEAG AANFALYNRG AEGVLLCLYG
101: RGGGGGEPAL EIELDPFVNR TGNVWHVSLE SVEGYFSYGF RCGLFDADHP LLDPYAKLIG DFVAADPVHV KEGTVPSSVS CLGSLANPPS YNWGRDKRPC
201: LPLENLVVYR ANVALFTKDK SSGLPNNVAG TFSGMAAKIH HFRSLGVNAV LLEPVFPFDQ VKGPYFPYHF FSPMNSYSAE GCSASAITAM KDMVKAMHRN
301: GIEVLLEVVF THTAEGQADG QMISISGIDK SSYYIADEIA GCKSGILNCN SPVTERLILD SLRHWVVDFH VDGFCFINAP FLVRGSRGEY LSRPPLLESI
401: AFDPVLSKTK IIADPWSPLG ISNVQFPFPH WKRWAEMNTR FSIDVRNFLK GEALIGDLAT RLCGSGDLFS NRGPAFSFNY VSRNSGLSLV DLVSFSNGDL
501: ASESSWNCGE EGPSENSAVL QTRLRQIRNF IFILFVSLGI PVLNMGDECG HSSAGSTSYK DRVPLKWKAL KTSFVKEVTG FISFLAALRS RRGDVFQRRE
601: FLKLENISWH GNNLSEPRWE DPTSKFLCMH IIAENDGNTP ELTKGDLYIC FNASEEPASA TLPAPAEGSV WLRLVDTSLT FPSFFTTESN LEVQQVLGYS
701: SYEVKAHSCV LFESKRDLP
101: RGGGGGEPAL EIELDPFVNR TGNVWHVSLE SVEGYFSYGF RCGLFDADHP LLDPYAKLIG DFVAADPVHV KEGTVPSSVS CLGSLANPPS YNWGRDKRPC
201: LPLENLVVYR ANVALFTKDK SSGLPNNVAG TFSGMAAKIH HFRSLGVNAV LLEPVFPFDQ VKGPYFPYHF FSPMNSYSAE GCSASAITAM KDMVKAMHRN
301: GIEVLLEVVF THTAEGQADG QMISISGIDK SSYYIADEIA GCKSGILNCN SPVTERLILD SLRHWVVDFH VDGFCFINAP FLVRGSRGEY LSRPPLLESI
401: AFDPVLSKTK IIADPWSPLG ISNVQFPFPH WKRWAEMNTR FSIDVRNFLK GEALIGDLAT RLCGSGDLFS NRGPAFSFNY VSRNSGLSLV DLVSFSNGDL
501: ASESSWNCGE EGPSENSAVL QTRLRQIRNF IFILFVSLGI PVLNMGDECG HSSAGSTSYK DRVPLKWKAL KTSFVKEVTG FISFLAALRS RRGDVFQRRE
601: FLKLENISWH GNNLSEPRWE DPTSKFLCMH IIAENDGNTP ELTKGDLYIC FNASEEPASA TLPAPAEGSV WLRLVDTSLT FPSFFTTESN LEVQQVLGYS
701: SYEVKAHSCV LFESKRDLP
001: MAAWSPSVGI GSCCLNNGIT RTWKFPSARL FTGRKNKIKL GSETLMFTRK RFMGDLVTSA LQSYQFSKIC ASKTSIELRE ALSSRRAEAD DLKKVTSYSF
101: RTKAGALVKV KVEKKREKYS ILVYVSSLEL SGDDKSRLVM VWGVYRSDSS CFLPLDFENS SQDSQTHTTE TTFVKSSLSE LMLGLEFDGK ESPFYLSFHL
201: KLVSGRDPDG QEMLTHRDTD FCIPVGFTAG HPLPLGLSSG PDDDSWNFSF FSRSSTNVVL CLYDDSTTDK PALELDLDPY VNRTGDVWHA SVDNTWDFVR
301: YGYRCKETAH SKEDVDVEGE PIVLDPYATV VGKSVSQKYL GSLSKSPSFD WGEDVSPNIP LEKLLVYRLN VKGFTQHRSS KLPSNVAGTF SGVAEKVSHL
401: KTLGTNAVLL EPIFSFSEQK GPYFPFHFFS PMDIYGPSNS LESAVNSMKV MVKKLHSEGI EVLLEVVFTH TADSGALRGI DDSSYYYKGR ANDLDSKSYL
501: NCNYPVVQQL VLESLRYWVT EFHVDGFCFI NASSLLRGVH GEQLSRPPLV EAIAFDPLLA ETKLIADCWD PLEMMPKEVR FPHWKRWAEL NTRYCRNVRN
601: FLRGRGVLSD LATRICGSGD VFTDGRGPAF SFNYISRNSG LSLVDIVSFS GPELASELSW NCGEEGATNK SAVLQRRLKQ IRNFLFIQYI SLGVPVLNMG
701: DECGISTRGS PLLESRKPFD WNLLASAFGT QITQFISFMT SVRARRSDVF QRRDFLKPEN IVWYANDQTT PKWEDPASKF LALEIKSESE EEETASLAEP
801: NEPKSNDLFI GFNASDHPES VVLPSLPDGS KWRRLVDTAL PFPGFFSVEG ETVVAEEPLQ QLVVYEMKPY SCTLFETINT TA
101: RTKAGALVKV KVEKKREKYS ILVYVSSLEL SGDDKSRLVM VWGVYRSDSS CFLPLDFENS SQDSQTHTTE TTFVKSSLSE LMLGLEFDGK ESPFYLSFHL
201: KLVSGRDPDG QEMLTHRDTD FCIPVGFTAG HPLPLGLSSG PDDDSWNFSF FSRSSTNVVL CLYDDSTTDK PALELDLDPY VNRTGDVWHA SVDNTWDFVR
301: YGYRCKETAH SKEDVDVEGE PIVLDPYATV VGKSVSQKYL GSLSKSPSFD WGEDVSPNIP LEKLLVYRLN VKGFTQHRSS KLPSNVAGTF SGVAEKVSHL
401: KTLGTNAVLL EPIFSFSEQK GPYFPFHFFS PMDIYGPSNS LESAVNSMKV MVKKLHSEGI EVLLEVVFTH TADSGALRGI DDSSYYYKGR ANDLDSKSYL
501: NCNYPVVQQL VLESLRYWVT EFHVDGFCFI NASSLLRGVH GEQLSRPPLV EAIAFDPLLA ETKLIADCWD PLEMMPKEVR FPHWKRWAEL NTRYCRNVRN
601: FLRGRGVLSD LATRICGSGD VFTDGRGPAF SFNYISRNSG LSLVDIVSFS GPELASELSW NCGEEGATNK SAVLQRRLKQ IRNFLFIQYI SLGVPVLNMG
701: DECGISTRGS PLLESRKPFD WNLLASAFGT QITQFISFMT SVRARRSDVF QRRDFLKPEN IVWYANDQTT PKWEDPASKF LALEIKSESE EEETASLAEP
801: NEPKSNDLFI GFNASDHPES VVLPSLPDGS KWRRLVDTAL PFPGFFSVEG ETVVAEEPLQ QLVVYEMKPY SCTLFETINT TA
Arabidopsis Description
ISA2ISA2 [Source:UniProtKB/TrEMBL;Acc:A0A178WGA8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.