CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY15458	Canola	cytosol	72.1	81.45
CDX89902	Canola	plastid	69.57	68.41
AT1G03310.2	Thale cress	plastid	71.14	66.78
CDY18165	Canola	plastid	64.73	65.53
GSMUA_Achr6P16200_001	Banana	cytosol, plasma membrane, vacuole	30.07	48.92
GSMUA_Achr6P16190_001	Banana	cytosol, plasma membrane, vacuole	43.84	48.02
VIT_07s0104g00370.t01	Wine grape	plasma membrane, plastid, vacuole	50.36	47.28
KRH67160	Soybean	plastid	49.4	47.23
HORVU1Hr1G062690.3	Barley	cytosol	40.58	46.73
KRG95479	Soybean	mitochondrion	48.67	46.59
PGSC0003DMT400002502	Potato	plastid	47.71	44.99
Solyc09g064800.1.1	Tomato	plastid	46.86	44.8
Os05t0393700-01	Rice	cytosol, plastid	39.73	44.28
TraesCS1A01G247100.1	Wheat	mitochondrion, plastid	42.39	44.26
TraesCS1B01G257700.1	Wheat	mitochondrion, plastid	41.55	43.65
TraesCS1D01G246300.1	Wheat	plastid	41.43	43.47
OQU77947	Sorghum	plastid	41.91	43.38
Zm00001d038121_P001	Maize	plastid	41.55	39.14
CDY70211	Canola	plastid	20.65	30.98
CDX77333	Canola	cytosol	3.74	29.52
CDX90708	Canola	plastid	26.57	29.26
CDY60217	Canola	extracellular	5.56	26.74
CDY05042	Canola	cytosol	8.7	26.18
CDY20500	Canola	plastid	23.91	25.26
CDX74820	Canola	plastid	23.79	25.03
CDX77349	Canola	mitochondrion	11.71	24.87
CDY51316	Canola	plastid	10.51	8.97
CDX70233	Canola	plastid	10.39	8.93
CDY47998	Canola	cytosol	4.59	5.85

Protein Annotations

Gene3D:2.60.40.10	Gene3D:2.60.40.1180	MapMan:3.2.2.6	MapMan:3.2.3.3.2.1	Gene3D:3.20.20.80	GO:A0A078DBS5
EnsemblPlants:CDX86680	ProteinID:CDX86680	ProteinID:CDX86680.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00145361001	InterPro:Glyco_hydro_13_N
InterPro:Glyco_hydro_13_cat_dom	InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780	InterPro:IPR013783	InterPro:Ig-like_fold
InterPro:Ig_E-set	PFAM:PF00128	PFAM:PF02922	PANTHER:PTHR43002	PANTHER:PTHR43002:SF2	SMART:SM00642
SUPFAM:SSF51011	SUPFAM:SSF51445	SUPFAM:SSF81296	UniParc:UPI0004EEF6DD	SEG:seg	:

Description

BnaC08g00230D

Coordinates

chrLK031846:-:1639371..1641942

Molecular Weight (calculated)

92648.8 Da

IEP (calculated)

5.956

GRAVY (calculated)

-0.253

Length

828 amino acids

Sequence
(BLAST)

001: MAAWSPSAGI RSSCLINNGI TEAWKFPSAS FLTGKNKTKR GSETLIVTRK HIYRDLGSYG LSKICASKTS VELKEEHVST RGAKVHDLKK VSSYLFRTKS
101: GALVKVQVEK KIERYSIMVY VSSLEPSGDD NKSSLVMVWG VFRSDSSCFL PLDFENSDQD LQTPFVKSSL SELMLELEFD GKESPFYLSF RLKLVSANDP
201: NGLEMLTHRD TNFCVPVGFT AGHPLPLGLS SGPDGGDSWN FAFFSRNSKS LVLCLYDDST TDRPALELDL DPYVNRTGDF WHASVDKTWG FVRYGYRCKE
301: STNSEDDEAE SIVLDPYARV IENTISPKFL GNVSPNIPLE KLIVYQLNIK GFTQHKSSKL PTNVAGTFSG VAEKVNHLKA LGTNAVLLEP IFSFSEQQGP
401: YFPFHFFSPM DMYGQESAVN SLKEMVKRLH SEGIEVLLEV VFTHTAKSGA LQGIDDSSYY YTGKDSKTYL NCNYPVVQQL ILESLRYWVT EFHVDGFCFI
501: NASSLLRGVH GEQLSRPPLV EAISFDPLLA GTKLIADCWN PRDIKMPKEV KFPHWKRWAE LNTRYCRDVR NFVSGRGLLS DLATRVCGSG DMFTDGRGPA
601: FSFNYISRNS GLSLVDLVSF SGPELVSELS WNCGEEGETN KYAYISLGIP VLNMGDECGV STKGSPLLES RKPFDWNMLA SGFGAQITQF ILLLTSVRAR
701: RSNVFQRNKF LKPESIVWYA NDQTTPNWED TASRFLALGI KTDSGEETTE LKNNDLFIGF NASDRPEKVI LPSLPEGRSK WRRLVDTALP FPGFFSVEGE
801: TVVTEDELVV YEMKLYSCTL FETINSTA

Best Arabidopsis Sequence Match ( AT1G03310.2 )
(BLAST)

001: MAAWSPSVGI GSCCLNNGIT RTWKFPSARL FTGRKNKIKL GSETLMFTRK RFMGDLVTSA LQSYQFSKIC ASKTSIELRE ALSSRRAEAD DLKKVTSYSF
101: RTKAGALVKV KVEKKREKYS ILVYVSSLEL SGDDKSRLVM VWGVYRSDSS CFLPLDFENS SQDSQTHTTE TTFVKSSLSE LMLGLEFDGK ESPFYLSFHL
201: KLVSGRDPDG QEMLTHRDTD FCIPVGFTAG HPLPLGLSSG PDDDSWNFSF FSRSSTNVVL CLYDDSTTDK PALELDLDPY VNRTGDVWHA SVDNTWDFVR
301: YGYRCKETAH SKEDVDVEGE PIVLDPYATV VGKSVSQKYL GSLSKSPSFD WGEDVSPNIP LEKLLVYRLN VKGFTQHRSS KLPSNVAGTF SGVAEKVSHL
401: KTLGTNAVLL EPIFSFSEQK GPYFPFHFFS PMDIYGPSNS LESAVNSMKV MVKKLHSEGI EVLLEVVFTH TADSGALRGI DDSSYYYKGR ANDLDSKSYL
501: NCNYPVVQQL VLESLRYWVT EFHVDGFCFI NASSLLRGVH GEQLSRPPLV EAIAFDPLLA ETKLIADCWD PLEMMPKEVR FPHWKRWAEL NTRYCRNVRN
601: FLRGRGVLSD LATRICGSGD VFTDGRGPAF SFNYISRNSG LSLVDIVSFS GPELASELSW NCGEEGATNK SAVLQRRLKQ IRNFLFIQYI SLGVPVLNMG
701: DECGISTRGS PLLESRKPFD WNLLASAFGT QITQFISFMT SVRARRSDVF QRRDFLKPEN IVWYANDQTT PKWEDPASKF LALEIKSESE EEETASLAEP
801: NEPKSNDLFI GFNASDHPES VVLPSLPDGS KWRRLVDTAL PFPGFFSVEG ETVVAEEPLQ QLVVYEMKPY SCTLFETINT TA

Arabidopsis Description

ISA2ISA2 [Source:UniProtKB/TrEMBL;Acc:A0A178WGA8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.