CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG95479	Soybean	mitochondrion	85.57	85.66
VIT_07s0104g00370.t01	Wine grape	plasma membrane, plastid, vacuole	58.2	57.14
Bra030528.1-P	Field mustard	cytosol	47.69	56.11
CDY15458	Canola	cytosol	47.34	55.93
GSMUA_Achr6P16200_001	Banana	cytosol, plasma membrane, vacuole	31.76	54.03
GSMUA_Achr6P16190_001	Banana	cytosol, plasma membrane, vacuole	46.42	53.17
PGSC0003DMT400002502	Potato	plastid	53.35	52.62
CDX89902	Canola	plastid	50.92	52.38
HORVU1Hr1G062690.3	Barley	cytosol	43.19	52.02
Solyc09g064800.1.1	Tomato	plastid	51.85	51.85
AT1G03310.2	Thale cress	plastid	51.73	50.79
Bra033388.1-P	Field mustard	plastid	49.54	50.59
CDY18165	Canola	plastid	47.58	50.37
Os05t0393700-01	Rice	cytosol, plastid	42.96	50.07
CDX86680	Canola	plastid	47.23	49.4
TraesCS1A01G247100.1	Wheat	mitochondrion, plastid	44.8	48.93
OQU77947	Sorghum	plastid	45.15	48.88
TraesCS1B01G257700.1	Wheat	mitochondrion, plastid	43.42	47.72
TraesCS1D01G246300.1	Wheat	plastid	43.3	47.53
Zm00001d038121_P001	Maize	plastid	43.53	42.89
KRH53006	Soybean	plastid	28.64	32.12
KRH62296	Soybean	plastid	28.52	31.55
KRH62892	Soybean	mitochondrion	2.89	28.41
KRH41413	Soybean	plastid	25.75	27.94
KRH34652	Soybean	plastid	11.66	10.62

Protein Annotations

EntrezGene:100797949	Gene3D:2.60.40.10	Gene3D:2.60.40.1180	MapMan:3.2.2.6	MapMan:3.2.3.3.2.1	Gene3D:3.20.20.80
EMBL:ACUP02002038	ncoils:Coil	EnsemblPlantsGene:GLYMA_03G151200	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_13_N	InterPro:Glyco_hydro_13_cat_dom
InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780	InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:Ig_E-set
UniProt:K7KF62	EnsemblPlants:KRH67160	ProteinID:KRH67160	ProteinID:KRH67160.1	PFAM:PF00128	PFAM:PF02922
PANTHER:PTHR43002	PANTHER:PTHR43002:SF2	SMART:SM00642	SUPFAM:SSF51011	SUPFAM:SSF51445	SUPFAM:SSF81296
UniParc:UPI0002336C3E	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:36608997..36611597

Molecular Weight (calculated)

96246.6 Da

IEP (calculated)

6.160

GRAVY (calculated)

-0.101

Length

866 amino acids

Sequence
(BLAST)

001: MTSLAPRFSF SVIPGSHHSK PKFSCFHEPF IQRKHLWPKL GLQNPISPFS RNPTSSKLCA TSRLSIEETE QQLGTLSRPE YLKGSSAYLF RTETGGGLVK
101: VYVTKRKDRY FVYTEISSLD ISGSVGETLL LCWGVYRSDS SCFVDLDTIG LRENAATGMN VSPLVQNSDG NFAVELEFDA KHVPLYLSFF LMSSLDAGME
201: IRSHRGTNFC VPVGLLPGYP GPLGLFCSPD GSVNFAIFSR RAESVVLCLY DENDMEKPAL ELDLDPYVNR TGDIWHVAFE SAKGFMSYGY SCRGGVLKRN
301: KDDGFAEHVV LDPYAKIVGN SYPDGVGFVK NLGWLGKEPD FDWGGDCHLD LSMEKLVVYR LNVKRFTQHE SSQLPSGLAG TFTGLAKKVQ HFKDLGVNAI
401: LLEPVFTFDE KKGPYFPSHF FSLMHIYGPS GGPVSAIASM KEMVKTMHAN GIEVLVEVVF SNTAEIGALQ GIDDSTYYYA NGVGGLKGQS ALNCNYPIVQ
501: SLILDSLRHW VTEFHIDGFS FLNASHLLRG FHGEYLTRPP LVEAIAFDPV LSKTKIIADC WDPHGMVAKE IRFPHWMRWA EINTNFCNDV RNFLRGENLL
601: SNLATRLCGS GDIFSGGRGP AFSFNYIARN FGVSLVDLVS FSSTDELSWN CGEEGPTNNT AILERRLKQI RNFLFILFVS LGVPVLNMGD ECGQSSGGFT
701: AYDGIKPFSW SSLKTGFGKQ TSQFIFFLSS FRRRRSDLLQ RMSFLKEENI EWYGSDGAPP RWEDLSCKFL AMALKAEEKE FLESSVSSDI SGDLFIAFNA
801: AGHPETAVLP LPPEGMLWYR LVDTALPFPG FFSASGEVVP EQTAGLFTYR MKSYSCTLFE ANNSTI

Best Arabidopsis Sequence Match ( AT1G03310.2 )
(BLAST)

001: MAAWSPSVGI GSCCLNNGIT RTWKFPSARL FTGRKNKIKL GSETLMFTRK RFMGDLVTSA LQSYQFSKIC ASKTSIELRE ALSSRRAEAD DLKKVTSYSF
101: RTKAGALVKV KVEKKREKYS ILVYVSSLEL SGDDKSRLVM VWGVYRSDSS CFLPLDFENS SQDSQTHTTE TTFVKSSLSE LMLGLEFDGK ESPFYLSFHL
201: KLVSGRDPDG QEMLTHRDTD FCIPVGFTAG HPLPLGLSSG PDDDSWNFSF FSRSSTNVVL CLYDDSTTDK PALELDLDPY VNRTGDVWHA SVDNTWDFVR
301: YGYRCKETAH SKEDVDVEGE PIVLDPYATV VGKSVSQKYL GSLSKSPSFD WGEDVSPNIP LEKLLVYRLN VKGFTQHRSS KLPSNVAGTF SGVAEKVSHL
401: KTLGTNAVLL EPIFSFSEQK GPYFPFHFFS PMDIYGPSNS LESAVNSMKV MVKKLHSEGI EVLLEVVFTH TADSGALRGI DDSSYYYKGR ANDLDSKSYL
501: NCNYPVVQQL VLESLRYWVT EFHVDGFCFI NASSLLRGVH GEQLSRPPLV EAIAFDPLLA ETKLIADCWD PLEMMPKEVR FPHWKRWAEL NTRYCRNVRN
601: FLRGRGVLSD LATRICGSGD VFTDGRGPAF SFNYISRNSG LSLVDIVSFS GPELASELSW NCGEEGATNK SAVLQRRLKQ IRNFLFIQYI SLGVPVLNMG
701: DECGISTRGS PLLESRKPFD WNLLASAFGT QITQFISFMT SVRARRSDVF QRRDFLKPEN IVWYANDQTT PKWEDPASKF LALEIKSESE EEETASLAEP
801: NEPKSNDLFI GFNASDHPES VVLPSLPDGS KWRRLVDTAL PFPGFFSVEG ETVVAEEPLQ QLVVYEMKPY SCTLFETINT TA

Arabidopsis Description

ISA2ISA2 [Source:UniProtKB/TrEMBL;Acc:A0A178WGA8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.