CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH62296	Soybean	plastid	91.84	90.55
VIT_18s0001g06520.t01	Wine grape	plastid	74.35	74.06
CDY05042	Canola	cytosol	26.17	73.45
PGSC0003DMT400018765	Potato	cytosol	21.37	72.05
GSMUA_Achr9P14980_001	Banana	cytosol	66.71	72.03
KRH62892	Soybean	mitochondrion	8.03	70.45
AT4G09020.1	Thale cress	plastid	69.56	70.29
CDX90708	Canola	plastid	68.39	70.21
Bra000667.1-P	Field mustard	plastid	65.16	69.86
Solyc06g009220.2.1	Tomato	plastid	66.19	69.15
Os09t0469400-01	Rice	plastid	30.05	68.44
CDY70211	Canola	plastid	48.19	67.39
TraesCS5D01G255800.1	Wheat	plastid	66.45	66.11
KXG35819	Sorghum	plastid	66.45	66.11
HORVU5Hr1G070160.1	Barley	plastid	66.06	65.72
TraesCS5B01G246400.1	Wheat	plastid	65.93	65.59
TraesCS5A01G248700.1	Wheat	plastid	65.8	65.55
CDX77333	Canola	cytosol	8.42	61.9
Bra014108.1-P	Field mustard	cytosol	16.45	61.35
PGSC0003DMT400018766	Potato	cytosol	19.3	60.32
CDX77349	Canola	mitochondrion	30.05	59.49
Bra014111.1-P	Field mustard	mitochondrion	10.75	58.04
CDY60217	Canola	extracellular	10.75	48.26
KRH41413	Soybean	plastid	41.71	40.35
KRG95479	Soybean	mitochondrion	32.51	29.02
KRH67160	Soybean	plastid	32.12	28.64
Zm00001d005948_P001	Maize	golgi, plasma membrane, plastid	12.69	23.45
KRH34652	Soybean	plastid	14.64	11.88

Protein Annotations

EntrezGene:100806342	Gene3D:2.60.40.10	Gene3D:2.60.40.1180	MapMan:3.2.2.6	MapMan:3.2.3.3.2.1	Gene3D:3.20.20.80
EMBL:ACUP02003444	EnsemblPlantsGene:GLYMA_06G100600	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_13_N	InterPro:Glyco_hydro_13_cat_dom	InterPro:Glyco_hydro_b
InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780	InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:Ig_E-set	UniProt:K7KU93
EnsemblPlants:KRH53006	ProteinID:KRH53006	ProteinID:KRH53006.1	PFAM:PF00128	PFAM:PF02922	PANTHER:PTHR43002
SMART:SM00642	SUPFAM:SSF51011	SUPFAM:SSF51445	SUPFAM:SSF81296	UniParc:UPI000233A787	SEG:seg

Description

hypothetical protein

Coordinates

chr6:-:7977536..7991536

Molecular Weight (calculated)

87067.2 Da

IEP (calculated)

6.050

GRAVY (calculated)

-0.401

Length

772 amino acids

Sequence
(BLAST)

001: MLHQFTLFAP IFSGGNNAGR CSFAGNSSVR DVRSLRFMKQ ASGRQSNNEH GVFSETMDRA KHRATTAYGG RAQEGVLEEE SSKVIESRPS WKAFPGQSFP
101: LGVSEVDSGI NFAIFSQNAT AVTLCLVLPE RGSIDALDGG MIEMVLDPDL NKTGDIWHIC IEDLPRSNVL YGYRIDGPRD WGKGHRFDSS IVLVDPYAKL
201: VEGRRYFGDI SMKLSKFLGT YDFDSLPFDW GENYKLPNIS EKDLVIYEMN VRAFTSDESS GLDSNIRGSY LGMIEKIPHL LELGINAVEL LPVFEFDELE
301: FQRRPNPRDH MINTWGYSTI NFFAPMSRYA SAGGGSVNAS REFKQMVKSL HSAGIEVILD VVYNHTNEAD DAFPYTTSFR GIDNKVYYML DNNGQLLNFS
401: GCGNTLNCNH PVVMELILDS LRHWVTEYHV DGFRFDLASV LCRGIDGSPL NAPPLIRAIA KDAVLSRCKI IAEPWDCGGL YLVGSFPNWD RWAEWNGKYR
501: DDVRKFIKGD SGVKGSFATR VAGSSDLYSV NNRRPYHGIN FVIAHDGFTL RDLVSYNFKH NEANGEGGND GSNDNFSWNC GLEGETDDAS VRALRSRQMK
601: NFHLALMISQ GTPMMLMGDE YGHTRNGNNN SYGHDTAINN FLWDQLDARK SDHFRFFSNM IKYRHAHEVF NHESFLSKND ITWHEDNWDN HDSKFLAFTL
701: HDKSGGDIYL AFNAHDYFVK VLLPAPPKKR NWFRVVDTNL KSPDDFVLDG VPNVGNTYNI APYSSILLEA KF

Best Arabidopsis Sequence Match ( AT4G09020.1 )
(BLAST)

001: MLTSPSSSST YDPFSSNFSP SLTNAFSSSF TIPMGLKLSR RVTRARIFSR KIKDRSTLKV TCRRAHERVV EEEASTMTET KLFKVSSGEV SPLGVSQVDK
101: GINFALFSQN ATSVTLCLSL SQSGKDDTDD DGMIELVLDP SVNKTGDTWH ICVEDLPLNN VLYGYRVDGP GEWQQGHRFD RSILLLDPYA KLVKGHSSFG
201: DSSQKFAQFY GTYDFESSPF DWGDDYKFPN IPEKDLVIYE MNVRAFTADE SSGMDPAIGG SYLGFIEKIP HLQDLGINAV ELLPVFEFDE LELQRRSNPR
301: DHMVNTWGYS TVNFFAPMSR YASGEGDPIK ASKEFKEMVK ALHSAGIEVI LDVVYNHTNE ADDKYPYTTS FRGIDNKVYY MLDPNNQLLN FSGCGNTLNC
401: NHPVVMELIL DSLRHWVTEY HVDGFRFDLA SVLCRATDGS PLSAPPLIRA IAKDSVLSRC KIIAEPWDCG GLYLVGKFPN WDRWAEWNGM YRDDVRRFIK
501: GDSGMKGSFA TRVSGSSDLY QVNQRKPYHG VNFVIAHDGF TLRDLVSYNF KHNEANGEGG NDGCNDNHSW NCGFEGETGD AHIKSLRTRQ MKNFHLALMI
601: SQGTPMMLMG DEYGHTRYGN NNSYGHDTSL NNFQWKELDA KKQNHFRFFS EVIKFRHSHH VLKHENFLTQ GEITWHEDNW DNSESKFLAF TLHDGIGGRD
701: IYVAFNAHDY FVKALIPQPP PGKQWFRVAD TNLESPDDFV REGVAGVADT YNVAPFSSIL LQSK

Arabidopsis Description

ISA3Isoamylase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M0S5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.