Factsheet for Bra014111.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 4
plasma membrane 1
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX77333	Canola	cytosol	58.74	80.0
Bra014108.1-P	Field mustard	cytosol	88.81	61.35
CDY60217	Canola	extracellular	64.34	53.49
PGSC0003DMT400018765	Potato	cytosol	30.07	18.78
Zm00001d005948_P001	Maize	golgi, plasma membrane, plastid	35.66	12.2
Bra000667.1-P	Field mustard	plastid	60.84	12.08
AT4G09020.1	Thale cress	plastid	61.54	11.52
GSMUA_Achr9P14980_001	Banana	cytosol	55.24	11.05
KRH53006	Soybean	plastid	58.04	10.75
KRH62296	Soybean	plastid	58.04	10.6
Solyc06g009220.2.1	Tomato	plastid	54.55	10.55
VIT_18s0001g06520.t01	Wine grape	plastid	55.94	10.32
TraesCS5A01G248700.1	Wheat	plastid	55.94	10.32
KXG35819	Sorghum	plastid	55.94	10.31
TraesCS5B01G246400.1	Wheat	plastid	55.94	10.31
TraesCS5D01G255800.1	Wheat	plastid	55.94	10.31
HORVU5Hr1G070160.1	Barley	plastid	55.24	10.18
PGSC0003DMT400018766	Potato	cytosol	15.38	8.91
Bra005001.1-P	Field mustard	plastid	37.76	6.68
Bra030528.1-P	Field mustard	cytosol	24.48	4.76
Bra033388.1-P	Field mustard	plastid	24.48	4.13
Bra040385.1-P	Field mustard	cytosol, plasma membrane, plastid	11.89	2.27
Bra009461.1-P	Field mustard	plastid	15.38	1.65
Os09t0469400-01	Rice	plastid	1.4	0.59

Protein Annotations

EnsemblPlants:Bra014111.1	EnsemblPlants:Bra014111.1-P	EnsemblPlantsGene:Bra014111	Gene3D:3.20.20.80	InterPro:Glycoside_hydrolase_SF	PANTHER:PTHR43002
PANTHER:PTHR43002:SF3	SEG:seg	SUPFAM:SSF51445	UniParc:UPI0002546748	UniProt:M4DC98	MapMan:35.1

Description

AT4G09020 (E=9e-038) ATISA3, ISA3 | ISA3 (ISOAMYLASE 3); alpha-amylase/ isoamylase

Coordinates

chrA08:+:3389861..3390709

Molecular Weight (calculated)

16819.2 Da

IEP (calculated)

10.363

GRAVY (calculated)

-0.583

Length

143 amino acids

Sequence
(BLAST)

001: MTNKKRKKKN NELRYTLRFR SFTSGIAEPW DYGGLYFVGE FPNWDGWAEW NGMYRDDVRR FMKGMKGSFA TRVAGSSDLY QVNQRNPPYH GVNFIIAHDG
101: FTLRDHTILR GNWQMKNFHL ALMISQVKSL PTYMNDIVVN NLI

Best Arabidopsis Sequence Match ( AT4G09020.1 )
(BLAST)

001: MLTSPSSSST YDPFSSNFSP SLTNAFSSSF TIPMGLKLSR RVTRARIFSR KIKDRSTLKV TCRRAHERVV EEEASTMTET KLFKVSSGEV SPLGVSQVDK
101: GINFALFSQN ATSVTLCLSL SQSGKDDTDD DGMIELVLDP SVNKTGDTWH ICVEDLPLNN VLYGYRVDGP GEWQQGHRFD RSILLLDPYA KLVKGHSSFG
201: DSSQKFAQFY GTYDFESSPF DWGDDYKFPN IPEKDLVIYE MNVRAFTADE SSGMDPAIGG SYLGFIEKIP HLQDLGINAV ELLPVFEFDE LELQRRSNPR
301: DHMVNTWGYS TVNFFAPMSR YASGEGDPIK ASKEFKEMVK ALHSAGIEVI LDVVYNHTNE ADDKYPYTTS FRGIDNKVYY MLDPNNQLLN FSGCGNTLNC
401: NHPVVMELIL DSLRHWVTEY HVDGFRFDLA SVLCRATDGS PLSAPPLIRA IAKDSVLSRC KIIAEPWDCG GLYLVGKFPN WDRWAEWNGM YRDDVRRFIK
501: GDSGMKGSFA TRVSGSSDLY QVNQRKPYHG VNFVIAHDGF TLRDLVSYNF KHNEANGEGG NDGCNDNHSW NCGFEGETGD AHIKSLRTRQ MKNFHLALMI
601: SQGTPMMLMG DEYGHTRYGN NNSYGHDTSL NNFQWKELDA KKQNHFRFFS EVIKFRHSHH VLKHENFLTQ GEITWHEDNW DNSESKFLAF TLHDGIGGRD
701: IYVAFNAHDY FVKALIPQPP PGKQWFRVAD TNLESPDDFV REGVAGVADT YNVAPFSSIL LQSK

Arabidopsis Description

ISA3Isoamylase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M0S5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.