Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX77333 | Canola | cytosol | 53.49 | 87.62 |
| Bra014111.1-P | Field mustard | mitochondrion | 53.49 | 64.34 |
| CDY05042 | Canola | cytosol | 36.63 | 22.91 |
| CDX77349 | Canola | mitochondrion | 42.44 | 18.72 |
| PGSC0003DMT400018765 | Potato | cytosol | 20.35 | 15.28 |
| CDY70211 | Canola | plastid | 41.28 | 12.86 |
| CDX90708 | Canola | plastid | 50.58 | 11.57 |
| AT4G09020.1 | Thale cress | plastid | 51.16 | 11.52 |
| Zm00001d005948_P001 | Maize | golgi, plasma membrane, plastid | 27.91 | 11.48 |
| GSMUA_Achr9P14980_001 | Banana | cytosol | 44.77 | 10.77 |
| KRH53006 | Soybean | plastid | 48.26 | 10.75 |
| KRH62296 | Soybean | plastid | 48.84 | 10.73 |
| Solyc06g009220.2.1 | Tomato | plastid | 44.77 | 10.42 |
| VIT_18s0001g06520.t01 | Wine grape | plastid | 46.51 | 10.32 |
| TraesCS5A01G248700.1 | Wheat | plastid | 45.93 | 10.19 |
| TraesCS5D01G255800.1 | Wheat | plastid | 45.93 | 10.18 |
| TraesCS5B01G246400.1 | Wheat | plastid | 45.93 | 10.18 |
| HORVU5Hr1G070160.1 | Barley | plastid | 45.35 | 10.05 |
| KXG35819 | Sorghum | plastid | 45.35 | 10.05 |
| PGSC0003DMT400018766 | Potato | cytosol | 11.63 | 8.1 |
| CDY15458 | Canola | cytosol | 29.07 | 6.82 |
| CDX74820 | Canola | plastid | 30.23 | 6.61 |
| CDY20500 | Canola | plastid | 29.65 | 6.51 |
| CDY18165 | Canola | plastid | 26.74 | 5.62 |
| CDX89902 | Canola | plastid | 27.33 | 5.58 |
| CDX86680 | Canola | plastid | 26.74 | 5.56 |
| Os09t0469400-01 | Rice | plastid | 6.4 | 3.24 |
| CDX70233 | Canola | plastid | 13.37 | 2.39 |
| CDY47998 | Canola | cytosol | 8.72 | 2.31 |
| CDY51316 | Canola | plastid | 12.79 | 2.27 |
Protein Annotations
| EnsemblPlants:CDY60217 | EnsemblPlantsGene:GSBRNA2T00028345001 | Gene3D:3.20.20.80 | GO:A0A078J6G1 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:Glycoside_hydrolase_SF | PANTHER:PTHR43002 | ProteinID:CDY60217 | ProteinID:CDY60217.1 | SUPFAM:SSF51445 |
| TMHMM:TMhelix | UniParc:UPI0004EF06BD | UniProt:A0A078J6G1 | MapMan:35.1 | : | : |
Description
BnaAnng16650DBnaAnng16650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J6G1]
Coordinates
chrLK033855:-:11600..13216
Molecular Weight (calculated)
20315.8 Da
IEP (calculated)
8.737
GRAVY (calculated)
-0.015
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MCNDLSLVLE NRLIVDIYVV FILDCFKIYK TILNFLFKYT NKYIPKIYFY CKLYNSKLTS VLSTDEIILF PNWDGWAEWN GMYRDDVRRF MKGMEGSFAT
101: RVAGSSDLYQ VNQRNPPYHG VNFIIAHDGF TLRDHTILRG NWQMKNFHLA LMISQVKPLP TYMNDIVVNN LI
101: RVAGSSDLYQ VNQRNPPYHG VNFIIAHDGF TLRDHTILRG NWQMKNFHLA LMISQVKPLP TYMNDIVVNN LI
001: MLTSPSSSST YDPFSSNFSP SLTNAFSSSF TIPMGLKLSR RVTRARIFSR KIKDRSTLKV TCRRAHERVV EEEASTMTET KLFKVSSGEV SPLGVSQVDK
101: GINFALFSQN ATSVTLCLSL SQSGKDDTDD DGMIELVLDP SVNKTGDTWH ICVEDLPLNN VLYGYRVDGP GEWQQGHRFD RSILLLDPYA KLVKGHSSFG
201: DSSQKFAQFY GTYDFESSPF DWGDDYKFPN IPEKDLVIYE MNVRAFTADE SSGMDPAIGG SYLGFIEKIP HLQDLGINAV ELLPVFEFDE LELQRRSNPR
301: DHMVNTWGYS TVNFFAPMSR YASGEGDPIK ASKEFKEMVK ALHSAGIEVI LDVVYNHTNE ADDKYPYTTS FRGIDNKVYY MLDPNNQLLN FSGCGNTLNC
401: NHPVVMELIL DSLRHWVTEY HVDGFRFDLA SVLCRATDGS PLSAPPLIRA IAKDSVLSRC KIIAEPWDCG GLYLVGKFPN WDRWAEWNGM YRDDVRRFIK
501: GDSGMKGSFA TRVSGSSDLY QVNQRKPYHG VNFVIAHDGF TLRDLVSYNF KHNEANGEGG NDGCNDNHSW NCGFEGETGD AHIKSLRTRQ MKNFHLALMI
601: SQGTPMMLMG DEYGHTRYGN NNSYGHDTSL NNFQWKELDA KKQNHFRFFS EVIKFRHSHH VLKHENFLTQ GEITWHEDNW DNSESKFLAF TLHDGIGGRD
701: IYVAFNAHDY FVKALIPQPP PGKQWFRVAD TNLESPDDFV REGVAGVADT YNVAPFSSIL LQSK
101: GINFALFSQN ATSVTLCLSL SQSGKDDTDD DGMIELVLDP SVNKTGDTWH ICVEDLPLNN VLYGYRVDGP GEWQQGHRFD RSILLLDPYA KLVKGHSSFG
201: DSSQKFAQFY GTYDFESSPF DWGDDYKFPN IPEKDLVIYE MNVRAFTADE SSGMDPAIGG SYLGFIEKIP HLQDLGINAV ELLPVFEFDE LELQRRSNPR
301: DHMVNTWGYS TVNFFAPMSR YASGEGDPIK ASKEFKEMVK ALHSAGIEVI LDVVYNHTNE ADDKYPYTTS FRGIDNKVYY MLDPNNQLLN FSGCGNTLNC
401: NHPVVMELIL DSLRHWVTEY HVDGFRFDLA SVLCRATDGS PLSAPPLIRA IAKDSVLSRC KIIAEPWDCG GLYLVGKFPN WDRWAEWNGM YRDDVRRFIK
501: GDSGMKGSFA TRVSGSSDLY QVNQRKPYHG VNFVIAHDGF TLRDLVSYNF KHNEANGEGG NDGCNDNHSW NCGFEGETGD AHIKSLRTRQ MKNFHLALMI
601: SQGTPMMLMG DEYGHTRYGN NNSYGHDTSL NNFQWKELDA KKQNHFRFFS EVIKFRHSHH VLKHENFLTQ GEITWHEDNW DNSESKFLAF TLHDGIGGRD
701: IYVAFNAHDY FVKALIPQPP PGKQWFRVAD TNLESPDDFV REGVAGVADT YNVAPFSSIL LQSK
Arabidopsis Description
ISA3Isoamylase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M0S5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.