CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
extracellular 1
endoplasmic reticulum 1
vacuole 3
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, vacuole
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51316	Canola	plastid	94.5	93.81
AT5G04360.2	Thale cress	plastid	83.7	83.52
Bra009461.1-P	Field mustard	plastid	98.23	70.91
Solyc11g008050.1.1	Tomato	cytosol	32.19	67.83
Os04t0164900-01	Rice	cytosol, nucleus, plastid	38.32	66.49
VIT_13s0019g05160.t01	Wine grape	plastid	65.42	65.9
KRH34652	Soybean	plastid	64.69	65.51
HORVU7Hr1G027860.4	Barley	cytosol, vacuole	55.87	59.06
KXG25811	Sorghum	plastid	57.84	57.78
TraesCS7B01G034600.1	Wheat	plastid	56.39	56.86
TraesCS7D01G133100.1	Wheat	golgi	56.28	56.28
TraesCS7A01G133500.2	Wheat	golgi	56.28	56.28
CDY47998	Canola	cytosol	37.07	54.92
Zm00001d004438_P005	Maize	plastid	54.1	53.77
CDY70211	Canola	plastid	9.76	17.03
CDX90708	Canola	plastid	11.73	15.03
CDX77333	Canola	cytosol	1.56	14.29
CDY60217	Canola	extracellular	2.39	13.37
CDX74820	Canola	plastid	10.7	13.09
CDY20500	Canola	plastid	10.59	13.01
CDY15458	Canola	cytosol	8.72	11.46
CDX89902	Canola	plastid	9.45	10.81
CDY18165	Canola	plastid	9.14	10.76
CDY05042	Canola	cytosol	3.01	10.55
CDX86680	Canola	plastid	8.93	10.39
CDX77349	Canola	mitochondrion	4.15	10.26

Protein Annotations

Gene3D:2.60.40.10	Gene3D:2.60.40.1130	Gene3D:2.60.40.1180	MapMan:3.2.3.3.2.2	Gene3D:3.20.20.80	GO:A0A078C5G8
EnsemblPlants:CDX70233	ProteinID:CDX70233	ProteinID:CDX70233.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0051060	EnsemblPlantsGene:GSBRNA2T00136362001
InterPro:Glyco_hydro_13_N	InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780	InterPro:IPR013783	InterPro:Ig-like_fold
InterPro:Ig_E-set	PFAM:PF02922	PFAM:PF11852	PANTHER:PTHR43631	InterPro:Pullul_strch	InterPro:Pullul_strch_C
SUPFAM:SSF51011	SUPFAM:SSF51445	SUPFAM:SSF81296	SignalP:SignalP-noTM	TIGRFAMs:TIGR02103	UniParc:UPI0004EE262D
SEG:seg	:	:	:	:	:

Description

BnaA10g25820D

Coordinates

chrLK031790:-:3680132..3686701

Molecular Weight (calculated)

106867.0 Da

IEP (calculated)

5.722

GRAVY (calculated)

-0.278

Length

963 amino acids

Sequence
(BLAST)

001: MALTLLTLTT SVPLLSRIFA AAFPLRSRFR RPSSSISRFQ LGFPSTTHRS ESLRCLCSSS SSAASPMQFE VSTPNSQLLD SLLYSRAYWV TEGVIAWNVD
101: VGEGSCYLYA SRVAGLSFSE DGIDGFDFRV KLEAESGSLR TNVVEKFPHI GNYKPFKVPS DLEVKDLVKS QLAIVCFDAE GRLIDGTGLQ LPGVLDELFS
201: YDGPLGANFT PGGGVSLHLW APTAQEVTVC IYKNPLDKSP METCPLEEVN GVWSIQGPSS WEGCYYVYKV SVYHPSTLKV ETCYANDPYA RGLSADASKT
301: YLVNLDSDDL KPEGWEKLAD KKPCLRSYSD ISIYELHVRD FSVYDETVEP EHRGGYLAFT LKDCAGVKHL QKLADAGLTH LHLLPTYQFG DVDDEKETWK
401: YIDTSVLEGL PPDSAEAQAR ITEIQNDDGF NWGYNPVLWG VPKGSYASDP TGPCRIIEFR KMVQALNHVG LNVVLDVVYN HLHANGPHDK DSVLDKIVPG
501: YYLRRNNDGF IENSTCVNNT ASEHYMVDRL IRDDLLNWVV NYKVDGFRFD LMGHIMKDTM VNAKSAIGNL RKETDGVDGS RIYIYGEGWN FGEVANNGRG
601: VNASQFNLTG TGIGSFNDRI RDATLGGSPF GHPLQQGFIT GLLLQPNGHD HGSEATQQLM LSTAKDHIQI GMAANLKDYV LTNHEGKEVK GSEILMHDAT
701: PVAYASEPTE TINYVSAHDN ETLFDIISLK TPMEISVDER CRINHLASSM ISLSQGIPFF HAGDEILRSK SLDRDSYNSG DWFNRLDFSY NSNNWGVGLP
801: PKGKNEHSWP LIKPRLQDPS FKPQSSHIVA TLNSFLDLLR IRYSSPLFRL DTAKAIQDRV RFHNTGPSSV PGAIIMSIED GHKGITSVSQ IDPVYSFIVV
901: IFNARPSEFS FFSPALKDRN LELHPIQVKS GDEIVRKSVY DAFSGGFTVP ARTTTVFVEV RKG

Best Arabidopsis Sequence Match ( AT5G04360.1 )
(BLAST)

001: MALTLTPTSS VHLLSSISVA RPRIFAADFN LRSRWRRRRP VTSISNFRLR LPSKTSLHCL CSSSSASSPM SLEVSSPNSQ FLDCLIYSRA YWVTQGVIAW
101: NVDVGEGSCY FYASKSAGLS FSEDGIDGYD LRIKLEAESG SLPADVIEKF PHIRNYKSFK VPKDLDIRDL VKSQLAVVCF DAEGRLIQGT GLQLPGVLDE
201: LFSYDGPLGA HFTPEGVSLH LWAPTAQAVS VCIYKNPLDK SPMEICPLKE ANGVWSTEGA CSWGGCYYVY KVSVYHPSTM KLETCYANDP YARGLSADGR
301: KTFLVNLDSD DLKPEGWDNL ADKKPCLRSF SDISIYELHV RDFSANDETV EPENRGGYLA FTSKDSAGVK HLQKLVDAGL THLHLLPTFQ FGDVDDEKEN
401: WKSVDTSLLE GLRPDSTEAQ ARITEIQNDD GYNWGYNPVL WGVPKGSYAS DPTGPCRIIE FRKMVQALNC TGLNVVLDVV YNHLHASGPH DKESVLDKIV
501: PGYYLRRNSD GFIENSTCVN NTASEHYMVD RLIRDDLLNW VVNYKVDGFR FDLMGHIMKA TIVNAKSAIG SLRKETDGVD GSRIYLYGEG WNFGEVAENG
601: RGINASQFNL GGTGIGSFND RIRDATLGGS PFGHPLQQGF ITGLLLQPNA HDHGSEATQE LMLSTAKNHI QTGMAANLKD YMLTNHEGKE VKGSEVLMHD
701: ATPVAYASLP TETINYVSAH DNETLFDIIS LKTPMEISVD ERCRINHLAS SMIALSQGIP FFHAGDEILR SKSLDRDSYN SGDWFNRLDF SYSSNNWGVG
801: LPPKGKNEHN WPLIKPRLQD PSFKPKSSHI VATLHNFLDL LRIRYSSPLF RLDTARAIQE RVRFHNTGPS SIPGAIVMSI EDGHRGIPSV SQIDPIYSLI
901: VVIFNARPSE FSYPSPALKD RKLELHPVQV MSADEIVKKS VYDSFSGGFT VPARTTTVFV ESRNG

Arabidopsis Description

PU1Pullulanase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8GTR4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.