CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d004438_P005	Maize	plastid	86.83	86.38
Os04t0164900-01	Rice	cytosol, nucleus, plastid	48.24	83.78
HORVU7Hr1G027860.4	Barley	cytosol, vacuole	76.35	80.79
TraesCS7B01G034600.1	Wheat	plastid	77.07	77.8
TraesCS7D01G133100.1	Wheat	golgi	76.76	76.84
TraesCS7A01G133500.2	Wheat	golgi	76.66	76.74
Solyc11g008050.1.1	Tomato	cytosol	29.36	61.93
KRH34652	Soybean	plastid	59.23	60.04
VIT_13s0019g05160.t01	Wine grape	plastid	58.71	59.2
CDX70233	Canola	plastid	57.78	57.84
CDY51316	Canola	plastid	57.99	57.63
AT5G04360.2	Thale cress	plastid	57.26	57.2
Bra009461.1-P	Field mustard	plastid	56.85	41.08
CDY47998	Canola	cytosol	25.93	38.46
Bra040385.1-P	Field mustard	cytosol, plasma membrane, plastid	26.56	34.13
KXG35819	Sorghum	plastid	10.89	13.53
KXG25605	Sorghum	plastid	11.1	13.51
OQU77947	Sorghum	plastid	10.58	12.75

Protein Annotations

Gene3D:2.60.40.10	Gene3D:2.60.40.1130	Gene3D:2.60.40.1180	MapMan:3.2.3.3.2.2	Gene3D:3.20.20.80	UniProt:A0A1B6PJH1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	GO:GO:0051060	InterPro:Glyco_hydro_13_N	InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780
InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:Ig_E-set	EnsemblPlants:KXG25811	ProteinID:KXG25811	ProteinID:KXG25811.1
PFAM:PF02922	PFAM:PF11852	PANTHER:PTHR43631	InterPro:Pullul_strch	InterPro:Pullul_strch_C	EnsemblPlantsGene:SORBI_3006G015800
SUPFAM:SSF51011	SUPFAM:SSF51445	SUPFAM:SSF81296	TIGRFAMs:TIGR02103	UniParc:UPI00081AC8E7	SEG:seg

Description

hypothetical protein

Coordinates

chr6:+:2452793..2467667

Molecular Weight (calculated)

106016.0 Da

IEP (calculated)

5.288

GRAVY (calculated)

-0.270

Length

964 amino acids

Sequence
(BLAST)

001: MQMLLHAGPS FQLAPPPRFA AAAAPSSASP RRSRTPQSSP PTSHSARAAA PGARRVRPVA PRAPMATGEE GAGSDVGLAE ATQVFLLDAR AYWVTGSLIA
101: WDVSDQETSL FLYASRNATM CMSSGVIEGY DSKVELQPEN DGLPSSVTQK FPFISSYRAF RIPSSVDVDT LVKCQLAVAS FDAHGNRQDV TGLQLPGVLD
201: DMFAYTGPLG TIFSEGAVSM YLWAPTAQDV SVNFYDGPAG PLLETVQLNE SNGVWSVTGP RNWENRYYLY EVTVYHPATA NIEKCLAADP YARGLSANST
301: RTWLVDINNE TLKPLAWDGL AAEKPKLDSF SDISIYELHI RDFSAHDSTA DCHFRGGFCA FTCQDSAGIE HLKKLSDAGL THVHLLPSFQ FGGVDDIKNN
401: WKCVDEAELS KLPPGSDLQQ AAIVAIQEDD PYNWGYNPVL WGVPKGSYAS NPDGPSRIIE YRQMVQALNR LGLRVVMDVV YNHLYSSGPF AITSVLDKIV
501: PGYYLRRDSN GQIENSAAVN NTASEHFMVD RLIVDDLLNW AVNYKVDGFR FDLMGHIMKR TMVRAKSALQ SLTIDEHGVD GSKIYLYGEG WDFGEVAQNQ
601: RGINGSQLNM SGTGIGSFND RVRDAINGGS PFGNPLQQGF STGLFLEPNG FYQGNETETR RTLATYADHI QIGLAGNLKD YVLISQTGEA RKGSEIRTFD
701: GSPVGYASSP IETINYASAH DNETLFDIIS LKTPMNLSID ERCRINHLST SMIALSQGIP FFHAGDEILR SKSLDRDSYN SGDWFNKIDF TYETNNWGVG
801: LPPREKNEGS WPLMKPRLEN PSFKPAKCDI IATLDKFVDI LKIRYSSPLF RLTTASDIEQ RVHFHNTGPS SVPGVIVMSI EDARNDRHEM AQIDKTFSCV
901: VTVFNVCPHE VTIEIPDLAS LGLQLHPVQV NSSDALVRQS AYEATTGRFT VPKRTTAVFV EPRC

Best Arabidopsis Sequence Match ( AT5G04360.1 )
(BLAST)

001: MALTLTPTSS VHLLSSISVA RPRIFAADFN LRSRWRRRRP VTSISNFRLR LPSKTSLHCL CSSSSASSPM SLEVSSPNSQ FLDCLIYSRA YWVTQGVIAW
101: NVDVGEGSCY FYASKSAGLS FSEDGIDGYD LRIKLEAESG SLPADVIEKF PHIRNYKSFK VPKDLDIRDL VKSQLAVVCF DAEGRLIQGT GLQLPGVLDE
201: LFSYDGPLGA HFTPEGVSLH LWAPTAQAVS VCIYKNPLDK SPMEICPLKE ANGVWSTEGA CSWGGCYYVY KVSVYHPSTM KLETCYANDP YARGLSADGR
301: KTFLVNLDSD DLKPEGWDNL ADKKPCLRSF SDISIYELHV RDFSANDETV EPENRGGYLA FTSKDSAGVK HLQKLVDAGL THLHLLPTFQ FGDVDDEKEN
401: WKSVDTSLLE GLRPDSTEAQ ARITEIQNDD GYNWGYNPVL WGVPKGSYAS DPTGPCRIIE FRKMVQALNC TGLNVVLDVV YNHLHASGPH DKESVLDKIV
501: PGYYLRRNSD GFIENSTCVN NTASEHYMVD RLIRDDLLNW VVNYKVDGFR FDLMGHIMKA TIVNAKSAIG SLRKETDGVD GSRIYLYGEG WNFGEVAENG
601: RGINASQFNL GGTGIGSFND RIRDATLGGS PFGHPLQQGF ITGLLLQPNA HDHGSEATQE LMLSTAKNHI QTGMAANLKD YMLTNHEGKE VKGSEVLMHD
701: ATPVAYASLP TETINYVSAH DNETLFDIIS LKTPMEISVD ERCRINHLAS SMIALSQGIP FFHAGDEILR SKSLDRDSYN SGDWFNRLDF SYSSNNWGVG
801: LPPKGKNEHN WPLIKPRLQD PSFKPKSSHI VATLHNFLDL LRIRYSSPLF RLDTARAIQE RVRFHNTGPS SIPGAIVMSI EDGHRGIPSV SQIDPIYSLI
901: VVIFNARPSE FSYPSPALKD RKLELHPVQV MSADEIVKKS VYDSFSGGFT VPARTTTVFV ESRNG

Arabidopsis Description

PU1Pullulanase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8GTR4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.