Factsheet for Zm00001d004438_P005

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG25811	Sorghum	plastid	86.38	86.83
HORVU7Hr1G027860.4	Barley	cytosol, vacuole	70.48	74.97
Os04t0164900-01	Rice	cytosol, nucleus, plastid	42.83	74.77
TraesCS7B01G034600.1	Wheat	plastid	71.21	72.25
TraesCS7D01G133100.1	Wheat	golgi	70.79	71.24
TraesCS7A01G133500.2	Wheat	golgi	70.79	71.24
KRH34652	Soybean	plastid	55.21	56.26
VIT_13s0019g05160.t01	Wine grape	plastid	54.9	55.65
Solyc11g008050.1.1	Tomato	cytosol	25.7	54.49
CDX70233	Canola	plastid	53.77	54.1
CDY51316	Canola	plastid	53.66	53.61
AT5G04360.2	Thale cress	plastid	53.15	53.37
Bra009461.1-P	Field mustard	plastid	52.94	38.46
CDY47998	Canola	cytosol	22.81	34.0
Bra040385.1-P	Field mustard	cytosol, plasma membrane, plastid	23.32	30.13
Zm00001d005949_P001	Maize	cytosol, mitochondrion, vacuole	5.26	18.28
Zm00001d050508_P001	Maize	cytosol	1.34	16.46
Zm00001d020799_P003	Maize	mitochondrion	10.63	12.84
Zm00001d050532_P001	Maize	extracellular	5.37	12.81
Zm00001d049753_P001	Maize	mitochondrion, plastid	10.42	12.11
Zm00001d024985_P004	Maize	plastid	2.79	12.0
Zm00001d016045_P001	Maize	plastid	4.33	11.38
Zm00001d038121_P001	Maize	plastid	9.8	10.81
Zm00001d052844_P001	Maize	cytosol	1.86	10.53
Zm00001d005948_P001	Maize	golgi, plasma membrane, plastid	3.61	8.37

Protein Annotations

Gene3D:2.60.40.10	Gene3D:2.60.40.1130	Gene3D:2.60.40.1180	MapMan:3.2.3.3.2.2	Gene3D:3.20.20.80	EntrezGene:541711
UniProt:A0A1D6EFE0	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	GO:GO:0051060	InterPro:Glyco_hydro_13_N	InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF
InterPro:IPR013780	InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:Ig_E-set	ProteinID:ONM18917.1	PFAM:PF02922
PFAM:PF11852	PANTHER:PTHR43631	InterPro:Pullul_strch	InterPro:Pullul_strch_C	SUPFAM:SSF51011	SUPFAM:SSF51445
SUPFAM:SSF81296	TIGRFAMs:TIGR02103	UniParc:UPI000843C740	EnsemblPlantsGene:Zm00001d004438	EnsemblPlants:Zm00001d004438_P005	EnsemblPlants:Zm00001d004438_T005
SEG:seg	:	:	:	:	:

Description

pullulanase-type starch debranching enzyme1 pullulanase-type starch debranching enzyme1

Coordinates

chr2:-:111723172..111775606

Molecular Weight (calculated)

107373.0 Da

IEP (calculated)

5.676

GRAVY (calculated)

-0.253

Length

969 amino acids

Sequence
(BLAST)

001: MLLHAGPSFL LAPPPRFAAA PSSASPRRSR TPQSSPPTSH FARPADPVAQ RVRPVAPRPP MATAEEGASS DVGVAVAESA QGFLLDARAY WVTKSLIAWN
101: ISDQKTSLFL YASRNATMCM SSQDMKGYDS KVELQPENDG LPSSVTQKFP FISSYRAFRI PSSVDVATLV KCQLAVASFD AHGNRQDVTG LQLPGVLDDM
201: FAYTGPLGTI FSEEAVSMYL WAPTAQDVSV SFYDGPAGPL LETVQLNELN GVWSVTGPRN WENRYYLYEV TVYHQTTGNI EKCLAADPYA RGLSANSTRT
301: WLVDINNETL KPLAWDGLAA EKPRLDSFSD ISIYELHIRD FSAHDSTVDC PFRGGFCAFT FQDSVGIEHL KKLSDAGLTH VHLLPSFQFG GVDDIKSNWK
401: CVDEIELSKL PPGSDLQQAA IVAIQEEDPY NWGYNPVVWG VPKGSYASNP DGPSRIIEYR LMVQALNRLG LRVVMDVVYN HLYSSGPFAI TSVLDKIVPG
501: YYLRRDSNGQ TENSAAVNNT ASEHFMVDRL IVDDLLNWAV NYKVDGFRFD LMGHIMKKTM RNALKLHSTL LPGFSANSHC KASRTEILEQ QKMVEEQQIR
601: AKSALQSLTI DEHGVDGSKI YFFNDRIRDA INGGSPFGNP LQQGFSTGLF LEPNGFYQGN ETETRLTLAT YADHIQIGLA GNLKDYVVIS HTGEARKGSE
701: IRTFDGSPVG YASSPIETIN YASAHDNETL FDIISLKTPM DLSIDERCRI NHLSTSMIAL SQGIPFFHAG DEILRSKSLD RDSYDSGDWF NKIDFTYETN
801: NWGVGLPPRE KNEGSWPLMK PRLENPSFKP AKHDIIAALD KFIDILKIRY SSPLFRLTTA SDIVQRVHFH NTGPSLVPGV IVMSIEDARN DRHDMAQIDE
901: TFSCVVTVFN VCPYEVSIEI PDLASLRLQL HPVQVNSSDA LARQSAYDTA TGRFTVPKRT AAVFVEPRC

Best Arabidopsis Sequence Match ( AT5G04360.1 )
(BLAST)

001: MALTLTPTSS VHLLSSISVA RPRIFAADFN LRSRWRRRRP VTSISNFRLR LPSKTSLHCL CSSSSASSPM SLEVSSPNSQ FLDCLIYSRA YWVTQGVIAW
101: NVDVGEGSCY FYASKSAGLS FSEDGIDGYD LRIKLEAESG SLPADVIEKF PHIRNYKSFK VPKDLDIRDL VKSQLAVVCF DAEGRLIQGT GLQLPGVLDE
201: LFSYDGPLGA HFTPEGVSLH LWAPTAQAVS VCIYKNPLDK SPMEICPLKE ANGVWSTEGA CSWGGCYYVY KVSVYHPSTM KLETCYANDP YARGLSADGR
301: KTFLVNLDSD DLKPEGWDNL ADKKPCLRSF SDISIYELHV RDFSANDETV EPENRGGYLA FTSKDSAGVK HLQKLVDAGL THLHLLPTFQ FGDVDDEKEN
401: WKSVDTSLLE GLRPDSTEAQ ARITEIQNDD GYNWGYNPVL WGVPKGSYAS DPTGPCRIIE FRKMVQALNC TGLNVVLDVV YNHLHASGPH DKESVLDKIV
501: PGYYLRRNSD GFIENSTCVN NTASEHYMVD RLIRDDLLNW VVNYKVDGFR FDLMGHIMKA TIVNAKSAIG SLRKETDGVD GSRIYLYGEG WNFGEVAENG
601: RGINASQFNL GGTGIGSFND RIRDATLGGS PFGHPLQQGF ITGLLLQPNA HDHGSEATQE LMLSTAKNHI QTGMAANLKD YMLTNHEGKE VKGSEVLMHD
701: ATPVAYASLP TETINYVSAH DNETLFDIIS LKTPMEISVD ERCRINHLAS SMIALSQGIP FFHAGDEILR SKSLDRDSYN SGDWFNRLDF SYSSNNWGVG
801: LPPKGKNEHN WPLIKPRLQD PSFKPKSSHI VATLHNFLDL LRIRYSSPLF RLDTARAIQE RVRFHNTGPS SIPGAIVMSI EDGHRGIPSV SQIDPIYSLI
901: VVIFNARPSE FSYPSPALKD RKLELHPVQV MSADEIVKKS VYDSFSGGFT VPARTTTVFV ESRNG

Arabidopsis Description

PU1Pullulanase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8GTR4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.