Factsheet for Zm00001d024985_P004

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	mitochondrion
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d050532_P001	Maize	extracellular	32.0	17.73
Zm00001d052844_P001	Maize	cytosol	8.0	10.53
Zm00001d016045_P001	Maize	plastid	16.0	9.76
PGSC0003DMT400053345	Potato	cytosol	8.89	6.9
VIT_11s0078g00310.t01	Wine grape	extracellular, golgi	12.89	5.38
Zm00001d005948_P001	Maize	golgi, plasma membrane, plastid	9.33	5.02
GSMUA_Achr9P14020_001	Banana	plasma membrane, vacuole	15.56	5.01
KRH41413	Soybean	plastid	16.89	4.76
Os08t0520900-00	Rice	cytosol, plastid	15.11	4.69
TraesCS7A01G251400.1	Wheat	mitochondrion, plastid	15.56	4.43
TraesCS7D01G249500.1	Wheat	mitochondrion, plastid	15.56	4.42
Solyc07g014590.2.1	Tomato	extracellular	15.11	4.32
TraesCS7B01G139700.2	Wheat	plastid	15.11	4.3
Zm00001d049753_P001	Maize	mitochondrion, plastid	15.56	4.2
CDY20500	Canola	plastid	13.78	3.95
CDX74820	Canola	plastid	13.78	3.94
Bra005001.1-P	Field mustard	plastid	13.78	3.84
AT2G39930.1	Thale cress	plastid	12.89	3.7
VIT_11s0078g00380.t01	Wine grape	cytosol	4.0	2.91
Zm00001d004438_P005	Maize	plastid	12.0	2.79
Zm00001d050508_P001	Maize	cytosol	0.89	2.53
Zm00001d005949_P001	Maize	cytosol, mitochondrion, vacuole	3.11	2.51
HORVU7Hr1G051710.1	Barley	vacuole	5.33	2.38
Zm00001d038121_P001	Maize	plastid	8.44	2.16
Zm00001d020799_P003	Maize	mitochondrion	7.56	2.12

Protein Annotations

Gene3D:3.20.20.80	Gene3D:3.40.50.720	MapMan:35.1	UniProt:A0A1D6J3B9	ProteinID:AQK42531.1	InterPro:Epimerase_deHydtase
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
GO:GO:0050662	InterPro:Glycoside_hydrolase_SF	InterPro:NAD(P)-bd_dom_sf	PFAM:PF01370	PANTHER:PTHR43002	PANTHER:PTHR43002:SF1
SUPFAM:SSF51445	SUPFAM:SSF51735	TMHMM:TMhelix	UniParc:UPI000843F383	EnsemblPlantsGene:Zm00001d024985	EnsemblPlants:Zm00001d024985_P004
EnsemblPlants:Zm00001d024985_T004	SEG:seg	:	:	:	:

Description

Isoamylase 1 chloroplastic

Coordinates

chr10:-:97994244..97996709

Molecular Weight (calculated)

25567.0 Da

IEP (calculated)

8.311

GRAVY (calculated)

-0.077

Length

225 amino acids

Sequence
(BLAST)

001: MPARALASTA TMPVPLHPPP PPPRRNIIAN TLAVLEAMAA HNVRTLIYSS TCATYGEPDK MPSLKELPSI ILVISQSWMH WKALLKGKQY SNMACSYLAF
101: LFVCVVSCMF YTKSLYAHNL CILTSISAQK SLYASKQTFG IVVHIGFNTT SVVPGVPMFY MGDEYGHTKG ENNNTYCHDH YVNYFRWDRK EEQSFDLYRF
201: CCLMTKFRKE CESLGLEDFP TSERL

Best Arabidopsis Sequence Match ( AT2G39930.1 )
(BLAST)

001: MDAIKCSSSF LHHTKLNTLF SNHTFPKISA PNFKPLFRPI SISAKDRRSN EAENIAVVEK PLKSDRFFIS DGLPSPFGPT VRDDGVNFSV YSTNSVSATI
101: CLISLSDLRQ NKVTEEIQLD PSRNRTGHVW HVFLRGDFKD MLYGYRFDGK FSPEEGHYYD SSNILLDPYA KAIISRDEFG VLGPDDNCWP QMACMVPTRE
201: EEFDWEGDMH LKLPQKDLVI YEMHVRGFTR HESSKIEFPG TYQGVAEKLD HLKELGINCI ELMPCHEFNE LEYYSYNTIL GDHRVNFWGY STIGFFSPMI
301: RYASASSNNF AGRAINEFKI LVKEAHKRGI EVIMDVVLNH TAEGNEKGPI FSFRGVDNSV YYMLAPKGEF YNYSGCGNTF NCNHPVVRQF ILDCLRYWVT
401: EMHVDGFRFD LGSIMSRSSS LWDAANVYGA DVEGDLLTTG TPISCPPVID MISNDPILRG VKLIAEAWDA GGLYQVGMFP HWGIWSEWNG KFRDVVRQFI
501: KGTDGFSGAF AECLCGSPNL YQGGRKPWHS INFICAHDGF TLADLVTYNN KNNLANGEEN NDGENHNYSW NCGEEGDFAS ISVKRLRKRQ MRNFFVSLMV
601: SQGVPMIYMG DEYGHTKGGN NNTYCHDNYM NYFRWDKKEE AHSDFFRFCR ILIKFRDECE SLGLNDFPTA KRLQWHGLAP EIPNWSETSR FVAFSLVDSV
701: KKEIYVAFNT SHLATLVSLP NRPGYRWEPF VDTSKPSPYD CITPDLPERE TAMKQYRHFL DANVYPMLSY SSIILLLSPI KDP

Arabidopsis Description

ISA1ISA1 [Source:UniProtKB/TrEMBL;Acc:A0A178VW25]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.