Factsheet for Zm00001d052844_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d016045_P001	Maize	plastid	50.88	23.58
Zm00001d050532_P001	Maize	extracellular	55.56	23.4
PGSC0003DMT400053345	Potato	cytosol	35.67	21.03
VIT_11s0078g00310.t01	Wine grape	extracellular, golgi	40.35	12.8
Zm00001d049753_P001	Maize	mitochondrion, plastid	53.8	11.03
Os08t0520900-00	Rice	cytosol, plastid	46.2	10.9
TraesCS7A01G251400.1	Wheat	mitochondrion, plastid	48.54	10.51
TraesCS7D01G249500.1	Wheat	mitochondrion, plastid	48.54	10.49
TraesCS7B01G139700.2	Wheat	plastid	47.37	10.25
GSMUA_Achr9P14020_001	Banana	plasma membrane, vacuole	40.94	10.03
KRH41413	Soybean	plastid	40.94	8.77
Solyc07g014590.2.1	Tomato	extracellular	38.01	8.26
Zm00001d024985_P004	Maize	plastid	10.53	8.0
AT2G39930.1	Thale cress	plastid	35.67	7.79
CDX74820	Canola	plastid	35.67	7.75
CDY20500	Canola	plastid	35.09	7.65
Zm00001d050508_P001	Maize	cytosol	3.51	7.59
Bra005001.1-P	Field mustard	plastid	35.09	7.43
Zm00001d020799_P003	Maize	mitochondrion	20.47	4.36
Zm00001d038121_P001	Maize	plastid	15.2	2.96
Zm00001d004438_P005	Maize	plastid	10.53	1.86
Zm00001d005949_P001	Maize	cytosol, mitochondrion, vacuole	2.92	1.79
Zm00001d005948_P001	Maize	golgi, plasma membrane, plastid	2.34	0.96
HORVU7Hr1G051710.1	Barley	vacuole	2.34	0.79
VIT_11s0078g00380.t01	Wine grape	cytosol	1.17	0.65

Protein Annotations

EnsemblPlants:Zm00001d052844_P001	EnsemblPlants:Zm00001d052844_T001	EnsemblPlantsGene:Zm00001d052844	Gene3D:2.60.40.1180	InterPro:Glyco_hydro_b	InterPro:IPR013780
PANTHER:PTHR43002	PANTHER:PTHR43002:SF1	ProteinID:AQK58188.1	SUPFAM:SSF51011	UniParc:UPI000843D9C9	UniProt:A0A1D6QKD6
MapMan:35.1	:	:	:	:	:

Description

Isoamylase 1 chloroplastic

Coordinates

chr4:+:202424678..202426443

Molecular Weight (calculated)

18990.3 Da

IEP (calculated)

4.729

GRAVY (calculated)

-0.330

Length

171 amino acids

Sequence
(BLAST)

001: MATGEEHVAA SAVEDTSEKK QASTTELPAP SGVTKKGRTQ GCICSQWECE SLGLEDFPTS ERLRWHGHQP GKPDWSEASR FVAFTMKDET KGEIYVAFNT
101: SHLLVVVGLP ECSGFRWEPV VDTGKEAPYD FLTDGLPDRA VTVYQFSHFL NSNLYPMLSY SSIIIVLRPD V

Best Arabidopsis Sequence Match ( AT2G39930.1 )
(BLAST)

001: MDAIKCSSSF LHHTKLNTLF SNHTFPKISA PNFKPLFRPI SISAKDRRSN EAENIAVVEK PLKSDRFFIS DGLPSPFGPT VRDDGVNFSV YSTNSVSATI
101: CLISLSDLRQ NKVTEEIQLD PSRNRTGHVW HVFLRGDFKD MLYGYRFDGK FSPEEGHYYD SSNILLDPYA KAIISRDEFG VLGPDDNCWP QMACMVPTRE
201: EEFDWEGDMH LKLPQKDLVI YEMHVRGFTR HESSKIEFPG TYQGVAEKLD HLKELGINCI ELMPCHEFNE LEYYSYNTIL GDHRVNFWGY STIGFFSPMI
301: RYASASSNNF AGRAINEFKI LVKEAHKRGI EVIMDVVLNH TAEGNEKGPI FSFRGVDNSV YYMLAPKGEF YNYSGCGNTF NCNHPVVRQF ILDCLRYWVT
401: EMHVDGFRFD LGSIMSRSSS LWDAANVYGA DVEGDLLTTG TPISCPPVID MISNDPILRG VKLIAEAWDA GGLYQVGMFP HWGIWSEWNG KFRDVVRQFI
501: KGTDGFSGAF AECLCGSPNL YQGGRKPWHS INFICAHDGF TLADLVTYNN KNNLANGEEN NDGENHNYSW NCGEEGDFAS ISVKRLRKRQ MRNFFVSLMV
601: SQGVPMIYMG DEYGHTKGGN NNTYCHDNYM NYFRWDKKEE AHSDFFRFCR ILIKFRDECE SLGLNDFPTA KRLQWHGLAP EIPNWSETSR FVAFSLVDSV
701: KKEIYVAFNT SHLATLVSLP NRPGYRWEPF VDTSKPSPYD CITPDLPERE TAMKQYRHFL DANVYPMLSY SSIILLLSPI KDP

Arabidopsis Description

ISA1ISA1 [Source:UniProtKB/TrEMBL;Acc:A0A178VW25]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.