Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d052844_P001 | Maize | cytosol | 23.58 | 50.88 |
| Zm00001d050532_P001 | Maize | extracellular | 18.43 | 16.75 |
| Zm00001d024985_P004 | Maize | plastid | 9.76 | 16.0 |
| PGSC0003DMT400053345 | Potato | cytosol | 11.38 | 14.48 |
| Os08t0520900-00 | Rice | cytosol, plastid | 19.78 | 10.07 |
| VIT_11s0078g00310.t01 | Wine grape | extracellular, golgi | 14.63 | 10.02 |
| Zm00001d049753_P001 | Maize | mitochondrion, plastid | 21.41 | 9.47 |
| TraesCS7B01G139700.2 | Wheat | plastid | 19.78 | 9.24 |
| TraesCS7A01G251400.1 | Wheat | mitochondrion, plastid | 19.78 | 9.24 |
| TraesCS7D01G249500.1 | Wheat | mitochondrion, plastid | 19.78 | 9.23 |
| GSMUA_Achr9P14020_001 | Banana | plasma membrane, vacuole | 16.53 | 8.74 |
| Solyc07g014590.2.1 | Tomato | extracellular | 16.53 | 7.75 |
| KRH41413 | Soybean | plastid | 16.26 | 7.52 |
| AT2G39930.1 | Thale cress | plastid | 14.91 | 7.02 |
| CDX74820 | Canola | plastid | 14.63 | 6.86 |
| CDY20500 | Canola | plastid | 14.36 | 6.76 |
| Bra005001.1-P | Field mustard | plastid | 14.36 | 6.56 |
| Zm00001d020799_P003 | Maize | mitochondrion | 12.47 | 5.74 |
| Zm00001d005949_P001 | Maize | cytosol, mitochondrion, vacuole | 4.34 | 5.73 |
| Zm00001d050508_P001 | Maize | cytosol | 1.08 | 5.06 |
| Zm00001d038121_P001 | Maize | plastid | 11.38 | 4.78 |
| Zm00001d004438_P005 | Maize | plastid | 11.38 | 4.33 |
| HORVU7Hr1G051710.1 | Barley | vacuole | 4.88 | 3.57 |
| Zm00001d005948_P001 | Maize | golgi, plasma membrane, plastid | 2.71 | 2.39 |
| VIT_11s0078g00380.t01 | Wine grape | cytosol | 1.63 | 1.94 |
Protein Annotations
| EnsemblPlants:Zm00001d016045_P001 | EnsemblPlants:Zm00001d016045_T001 | EnsemblPlantsGene:Zm00001d016045 | Gene3D:2.60.40.1180 | InterPro:CRIB_dom | InterPro:Glyco_hydro_b |
| InterPro:IPR000095 | InterPro:IPR013780 | PANTHER:PTHR43002 | PANTHER:PTHR43002:SF1 | ProteinID:AQK69971.1 | SEG:seg |
| SMART:SM00285 | SUPFAM:SSF51011 | UniParc:UPI0008423DD6 | UniProt:A0A1D6H571 | MapMan:35.1 | : |
Description
Isoamylase 1 chloroplastic
Coordinates
chr5:+:141438801..141445420
Molecular Weight (calculated)
41335.6 Da
IEP (calculated)
8.389
GRAVY (calculated)
-0.128
Length
369 amino acids
Sequence
(BLAST)
(BLAST)
001: MTEVALLRGP TNLASTVSRA SASSPSSTLC YLANADSDVL PRSGSPERTA GSARSRRLLE QRGQEAVEEE EEWTVGGGGE GEHGGGGMEI RLPTDVQHVA
101: HITFDRFHGF LGLPVEFKPE VPLRAPSVHK TKVIKLDGVL IKPFEEKYQK DAYTYQARHV FIPINIRGTH CGVVGILFFC SNRHRLQVYF RNKFMQCVSA
201: MCWVQSYIGQ SQCTEFKRKQ YSNMACSYLV FLFVCVVSCM FYTKSLYPQS LYSNIDKCPK SLYASKQTFG IVVHIGFNTS SVVPKDKTKG EIYVAFNTSH
301: LPVVVGLLER SGFRWEPVVD TGKEAPYDFL TDGLPDRAVT VYQFSHFLNS NLYPMLSYSS IILVLRPDV
101: HITFDRFHGF LGLPVEFKPE VPLRAPSVHK TKVIKLDGVL IKPFEEKYQK DAYTYQARHV FIPINIRGTH CGVVGILFFC SNRHRLQVYF RNKFMQCVSA
201: MCWVQSYIGQ SQCTEFKRKQ YSNMACSYLV FLFVCVVSCM FYTKSLYPQS LYSNIDKCPK SLYASKQTFG IVVHIGFNTS SVVPKDKTKG EIYVAFNTSH
301: LPVVVGLLER SGFRWEPVVD TGKEAPYDFL TDGLPDRAVT VYQFSHFLNS NLYPMLSYSS IILVLRPDV
001: MDAIKCSSSF LHHTKLNTLF SNHTFPKISA PNFKPLFRPI SISAKDRRSN EAENIAVVEK PLKSDRFFIS DGLPSPFGPT VRDDGVNFSV YSTNSVSATI
101: CLISLSDLRQ NKVTEEIQLD PSRNRTGHVW HVFLRGDFKD MLYGYRFDGK FSPEEGHYYD SSNILLDPYA KAIISRDEFG VLGPDDNCWP QMACMVPTRE
201: EEFDWEGDMH LKLPQKDLVI YEMHVRGFTR HESSKIEFPG TYQGVAEKLD HLKELGINCI ELMPCHEFNE LEYYSYNTIL GDHRVNFWGY STIGFFSPMI
301: RYASASSNNF AGRAINEFKI LVKEAHKRGI EVIMDVVLNH TAEGNEKGPI FSFRGVDNSV YYMLAPKGEF YNYSGCGNTF NCNHPVVRQF ILDCLRYWVT
401: EMHVDGFRFD LGSIMSRSSS LWDAANVYGA DVEGDLLTTG TPISCPPVID MISNDPILRG VKLIAEAWDA GGLYQVGMFP HWGIWSEWNG KFRDVVRQFI
501: KGTDGFSGAF AECLCGSPNL YQGGRKPWHS INFICAHDGF TLADLVTYNN KNNLANGEEN NDGENHNYSW NCGEEGDFAS ISVKRLRKRQ MRNFFVSLMV
601: SQGVPMIYMG DEYGHTKGGN NNTYCHDNYM NYFRWDKKEE AHSDFFRFCR ILIKFRDECE SLGLNDFPTA KRLQWHGLAP EIPNWSETSR FVAFSLVDSV
701: KKEIYVAFNT SHLATLVSLP NRPGYRWEPF VDTSKPSPYD CITPDLPERE TAMKQYRHFL DANVYPMLSY SSIILLLSPI KDP
101: CLISLSDLRQ NKVTEEIQLD PSRNRTGHVW HVFLRGDFKD MLYGYRFDGK FSPEEGHYYD SSNILLDPYA KAIISRDEFG VLGPDDNCWP QMACMVPTRE
201: EEFDWEGDMH LKLPQKDLVI YEMHVRGFTR HESSKIEFPG TYQGVAEKLD HLKELGINCI ELMPCHEFNE LEYYSYNTIL GDHRVNFWGY STIGFFSPMI
301: RYASASSNNF AGRAINEFKI LVKEAHKRGI EVIMDVVLNH TAEGNEKGPI FSFRGVDNSV YYMLAPKGEF YNYSGCGNTF NCNHPVVRQF ILDCLRYWVT
401: EMHVDGFRFD LGSIMSRSSS LWDAANVYGA DVEGDLLTTG TPISCPPVID MISNDPILRG VKLIAEAWDA GGLYQVGMFP HWGIWSEWNG KFRDVVRQFI
501: KGTDGFSGAF AECLCGSPNL YQGGRKPWHS INFICAHDGF TLADLVTYNN KNNLANGEEN NDGENHNYSW NCGEEGDFAS ISVKRLRKRQ MRNFFVSLMV
601: SQGVPMIYMG DEYGHTKGGN NNTYCHDNYM NYFRWDKKEE AHSDFFRFCR ILIKFRDECE SLGLNDFPTA KRLQWHGLAP EIPNWSETSR FVAFSLVDSV
701: KKEIYVAFNT SHLATLVSLP NRPGYRWEPF VDTSKPSPYD CITPDLPERE TAMKQYRHFL DANVYPMLSY SSIILLLSPI KDP
Arabidopsis Description
ISA1ISA1 [Source:UniProtKB/TrEMBL;Acc:A0A178VW25]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.