Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G139700.2 | Wheat | plastid | 79.76 | 50.89 |
| TraesCS7D01G249500.1 | Wheat | mitochondrion, plastid | 79.56 | 50.7 |
| TraesCS7A01G251400.1 | Wheat | mitochondrion, plastid | 79.17 | 50.51 |
| Os08t0520900-00 | Rice | cytosol, plastid | 72.22 | 50.21 |
| VIT_11s0078g00380.t01 | Wine grape | cytosol | 27.18 | 44.34 |
| KXG25605 | Sorghum | plastid | 68.65 | 43.69 |
| Solyc07g014590.2.1 | Tomato | extracellular | 60.12 | 38.5 |
| KRH41413 | Soybean | plastid | 58.13 | 36.72 |
| CDY20500 | Canola | plastid | 56.94 | 36.61 |
| CDX74820 | Canola | plastid | 56.94 | 36.47 |
| AT2G39930.1 | Thale cress | plastid | 55.36 | 35.63 |
| Bra005001.1-P | Field mustard | plastid | 56.94 | 35.52 |
| GSMUA_Achr9P14020_001 | Banana | plasma membrane, vacuole | 47.82 | 34.53 |
| Zm00001d049753_P001 | Maize | mitochondrion, plastid | 55.95 | 33.81 |
| VIT_11s0078g00310.t01 | Wine grape | extracellular, golgi | 35.71 | 33.4 |
| HORVU5Hr1G070160.1 | Barley | plastid | 37.7 | 24.48 |
| HORVU1Hr1G062690.3 | Barley | cytosol | 27.58 | 19.33 |
| HORVU7Hr1G027860.4 | Barley | cytosol, vacuole | 12.7 | 7.03 |
| Zm00001d024985_P004 | Maize | plastid | 2.38 | 5.33 |
| Zm00001d016045_P001 | Maize | plastid | 3.57 | 4.88 |
| Zm00001d050532_P001 | Maize | extracellular | 2.38 | 2.96 |
| Zm00001d052844_P001 | Maize | cytosol | 0.79 | 2.34 |
| PGSC0003DMT400053345 | Potato | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:2.60.40.10 | MapMan:3.2.2.6 | MapMan:3.2.3.3.2.1 | Gene3D:3.20.20.80 | UniProt:A0A287WH44 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009507 |
| GO:GO:0009536 | GO:GO:0010021 | GO:GO:0010368 | GO:GO:0016787 | GO:GO:0019156 | InterPro:Glyco_hydro_13_N |
| InterPro:Glyco_hydro_13_cat_dom | InterPro:Glycoside_hydrolase_SF | EnsemblPlantsGene:HORVU7Hr1G051710 | EnsemblPlants:HORVU7Hr1G051710.1 | InterPro:IPR013783 | InterPro:Ig-like_fold |
| InterPro:Ig_E-set | PFAM:PF00128 | PFAM:PF02922 | PANTHER:PTHR43002 | PANTHER:PTHR43002:SF1 | SMART:SM00642 |
| SUPFAM:SSF51445 | SUPFAM:SSF81296 | UniParc:UPI000B461FBE | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr7H:+:195373797..195377519
Molecular Weight (calculated)
52016.5 Da
IEP (calculated)
4.630
GRAVY (calculated)
-0.177
Length
504 amino acids
Sequence
(BLAST)
(BLAST)
001: GHIXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXRPN ATAGKGVGEV CAAAVEAATK AEEEEDEEEE PVAEDRYALG GACRVLAGMP APLGATALAG
101: GVNFAVYSGG ATAAALCLFT PEDLKADRVS EEVPLDPLMN RTGDVWHVFL EGELHGMLYG YRFDGTFAPH CGHYFDVSNV VVDPYAKAVI SREEYGVPAH
201: GNNCWPQMAG MIPLPYSTFD WEGDLPLRYP QKDLVIYEMH LRGFTKHDSS NVEHPGTFIG AVSKLDYLKE LGVNCIELMP CHEFNELEYA TSSSKMNFWG
301: YSTINFFSPM TRYTSGGIKN CGRDGINEFK TFVRESHKRG IEVILDVVFN HTAEGNENGP ILSFRGVDNT TYYMLAPKGE FYNYSGCGNT FNCNHPVVRQ
401: FIVDCLRYWV MEMHIDGFRF DLASIMTRGS SLWDPINVYG APIEGDMITT GTPLVTPPLI DMISNDPILG GVKLIAEAWD AGGLYQVGQF PHWNVWSEWN
501: GKYH
101: GVNFAVYSGG ATAAALCLFT PEDLKADRVS EEVPLDPLMN RTGDVWHVFL EGELHGMLYG YRFDGTFAPH CGHYFDVSNV VVDPYAKAVI SREEYGVPAH
201: GNNCWPQMAG MIPLPYSTFD WEGDLPLRYP QKDLVIYEMH LRGFTKHDSS NVEHPGTFIG AVSKLDYLKE LGVNCIELMP CHEFNELEYA TSSSKMNFWG
301: YSTINFFSPM TRYTSGGIKN CGRDGINEFK TFVRESHKRG IEVILDVVFN HTAEGNENGP ILSFRGVDNT TYYMLAPKGE FYNYSGCGNT FNCNHPVVRQ
401: FIVDCLRYWV MEMHIDGFRF DLASIMTRGS SLWDPINVYG APIEGDMITT GTPLVTPPLI DMISNDPILG GVKLIAEAWD AGGLYQVGQF PHWNVWSEWN
501: GKYH
001: MDAIKCSSSF LHHTKLNTLF SNHTFPKISA PNFKPLFRPI SISAKDRRSN EAENIAVVEK PLKSDRFFIS DGLPSPFGPT VRDDGVNFSV YSTNSVSATI
101: CLISLSDLRQ NKVTEEIQLD PSRNRTGHVW HVFLRGDFKD MLYGYRFDGK FSPEEGHYYD SSNILLDPYA KAIISRDEFG VLGPDDNCWP QMACMVPTRE
201: EEFDWEGDMH LKLPQKDLVI YEMHVRGFTR HESSKIEFPG TYQGVAEKLD HLKELGINCI ELMPCHEFNE LEYYSYNTIL GDHRVNFWGY STIGFFSPMI
301: RYASASSNNF AGRAINEFKI LVKEAHKRGI EVIMDVVLNH TAEGNEKGPI FSFRGVDNSV YYMLAPKGEF YNYSGCGNTF NCNHPVVRQF ILDCLRYWVT
401: EMHVDGFRFD LGSIMSRSSS LWDAANVYGA DVEGDLLTTG TPISCPPVID MISNDPILRG VKLIAEAWDA GGLYQVGMFP HWGIWSEWNG KFRDVVRQFI
501: KGTDGFSGAF AECLCGSPNL YQGGRKPWHS INFICAHDGF TLADLVTYNN KNNLANGEEN NDGENHNYSW NCGEEGDFAS ISVKRLRKRQ MRNFFVSLMV
601: SQVKLTICCF FNFNSCSKLV SLMLCTLNYD TGVEGMSSKY KLISHKRI
101: CLISLSDLRQ NKVTEEIQLD PSRNRTGHVW HVFLRGDFKD MLYGYRFDGK FSPEEGHYYD SSNILLDPYA KAIISRDEFG VLGPDDNCWP QMACMVPTRE
201: EEFDWEGDMH LKLPQKDLVI YEMHVRGFTR HESSKIEFPG TYQGVAEKLD HLKELGINCI ELMPCHEFNE LEYYSYNTIL GDHRVNFWGY STIGFFSPMI
301: RYASASSNNF AGRAINEFKI LVKEAHKRGI EVIMDVVLNH TAEGNEKGPI FSFRGVDNSV YYMLAPKGEF YNYSGCGNTF NCNHPVVRQF ILDCLRYWVT
401: EMHVDGFRFD LGSIMSRSSS LWDAANVYGA DVEGDLLTTG TPISCPPVID MISNDPILRG VKLIAEAWDA GGLYQVGMFP HWGIWSEWNG KFRDVVRQFI
501: KGTDGFSGAF AECLCGSPNL YQGGRKPWHS INFICAHDGF TLADLVTYNN KNNLANGEEN NDGENHNYSW NCGEEGDFAS ISVKRLRKRQ MRNFFVSLMV
601: SQVKLTICCF FNFNSCSKLV SLMLCTLNYD TGVEGMSSKY KLISHKRI
Arabidopsis Description
ISA1ISA1 [Source:UniProtKB/TrEMBL;Acc:A0A178VW25]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.