Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G246400.1 | Wheat | plastid | 94.85 | 94.85 |
| TraesCS5A01G248700.1 | Wheat | plastid | 93.69 | 93.81 |
| TraesCS5D01G255800.1 | Wheat | plastid | 92.14 | 92.14 |
| KXG35819 | Sorghum | plastid | 78.48 | 78.48 |
| Os09t0469400-01 | Rice | plastid | 33.63 | 76.99 |
| Zm00001d020799_P003 | Maize | mitochondrion | 79.38 | 76.81 |
| GSMUA_Achr9P14980_001 | Banana | cytosol | 69.33 | 75.24 |
| Zm00001d005949_P001 | Maize | cytosol, mitochondrion, vacuole | 26.93 | 74.91 |
| PGSC0003DMT400018765 | Potato | cytosol | 21.26 | 72.05 |
| CDY05042 | Canola | cytosol | 25.13 | 70.91 |
| CDX90708 | Canola | plastid | 65.08 | 67.15 |
| Bra000667.1-P | Field mustard | plastid | 61.73 | 66.53 |
| AT4G09020.1 | Thale cress | plastid | 65.34 | 66.36 |
| VIT_18s0001g06520.t01 | Wine grape | plastid | 66.11 | 66.19 |
| KRH53006 | Soybean | plastid | 65.72 | 66.06 |
| CDY70211 | Canola | plastid | 46.78 | 65.76 |
| Solyc06g009220.2.1 | Tomato | plastid | 62.37 | 65.49 |
| KRH62296 | Soybean | plastid | 64.56 | 63.98 |
| CDX77333 | Canola | cytosol | 8.12 | 60.0 |
| CDX77349 | Canola | mitochondrion | 28.99 | 57.69 |
| Bra014108.1-P | Field mustard | cytosol | 15.08 | 56.52 |
| Bra014111.1-P | Field mustard | mitochondrion | 10.18 | 55.24 |
| PGSC0003DMT400018766 | Potato | cytosol | 17.27 | 54.25 |
| CDY60217 | Canola | extracellular | 10.05 | 45.35 |
| HORVU7Hr1G051710.1 | Barley | vacuole | 24.48 | 37.7 |
| HORVU1Hr1G062690.3 | Barley | cytosol | 30.54 | 32.96 |
| HORVU7Hr1G027860.4 | Barley | cytosol, vacuole | 13.79 | 11.75 |
Protein Annotations
| Gene3D:2.60.40.10 | Gene3D:2.60.40.1180 | MapMan:3.2.2.6 | MapMan:3.2.3.3.2.1 | Gene3D:3.20.20.80 | UniProt:A0A287RPG3 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016787 | InterPro:Glyco_hydro_13_N | InterPro:Glyco_hydro_13_cat_dom | InterPro:Glyco_hydro_b | InterPro:Glycoside_hydrolase_SF | EnsemblPlantsGene:HORVU5Hr1G070160 |
| EnsemblPlants:HORVU5Hr1G070160.1 | InterPro:IPR013780 | InterPro:IPR013783 | InterPro:Ig-like_fold | InterPro:Ig_E-set | PFAM:PF00128 |
| PFAM:PF02922 | PANTHER:PTHR43002 | SMART:SM00642 | SUPFAM:SSF51011 | SUPFAM:SSF51445 | SUPFAM:SSF81296 |
| UniParc:UPI000B47D9AE | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:-:527151532..527162989
Molecular Weight (calculated)
86309.5 Da
IEP (calculated)
6.599
GRAVY (calculated)
-0.417
Length
776 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSAASTNRS PLRPAAAATA TATARRSSSS ARLCSVAASR LGVAPGCGGG HFGKAQRFGS VRTTTARAQA GNAGRIATEE KESAMAGTEM PLKYSSGKAS
101: PLGVSQVESG INFAIFSQHA SSVTLCIKLA ERGTKDEESE KLVEFALDCQ KNKTGDIWHV LVEGLPTSGV LYGYRVNGPQ GWEQGHRFDS NIILLDPYAK
201: LVSGRNYFGV DKGKPSQPFG TYDFDSSPFD WGADYQLPNL PETDLVIYEM NVRAFTADES SGLDPAVRGS YLGFIDKIPH LLELGVNAVE LLPVFEFDEL
301: EFKRYPNPRD HMVNTWGYST INFFAPMTRY ASAGGGPLAA SRELKQMVKA LHKAGIEVIL DVVYNHTNEA DDAHPYVTSF RGIDNKVYYM LDPNNNSQLL
401: NFSGCGNTLN CNHPVVMELV LDSLRHWVKE YHIDGFRFDL ASVLCRGPDG SPLDAPPLIR EIAKDSVLSR CKIIAEPWDC GGLYLVGRFP NWDRWAEWNG
501: KYRDDLRRFI KGDPGMKGVL ATRISGSADL YQVNQRKPHH GVNFIIAHDG FTLCDLVSYN LKHNDANGEG GRDGCNDNFS WNCGVEGETN DSNVLALRSR
601: QMKNFHVALM ISQGTPMMLM GDEYGHTRYG NNNSYGHDTC INNFQWEQLA ERRYGHFRFF SEMIKFRQNH PILKRDRFLS KNDVTWHEDC WDNLESKFLA
701: FTIHDHNSGG DIYLAFNAHD YFVDAVIPPA PHHKSWNRVV DTNLESPNDI TPEGVPLTGS GYRIASYSSI LLKAKP
101: PLGVSQVESG INFAIFSQHA SSVTLCIKLA ERGTKDEESE KLVEFALDCQ KNKTGDIWHV LVEGLPTSGV LYGYRVNGPQ GWEQGHRFDS NIILLDPYAK
201: LVSGRNYFGV DKGKPSQPFG TYDFDSSPFD WGADYQLPNL PETDLVIYEM NVRAFTADES SGLDPAVRGS YLGFIDKIPH LLELGVNAVE LLPVFEFDEL
301: EFKRYPNPRD HMVNTWGYST INFFAPMTRY ASAGGGPLAA SRELKQMVKA LHKAGIEVIL DVVYNHTNEA DDAHPYVTSF RGIDNKVYYM LDPNNNSQLL
401: NFSGCGNTLN CNHPVVMELV LDSLRHWVKE YHIDGFRFDL ASVLCRGPDG SPLDAPPLIR EIAKDSVLSR CKIIAEPWDC GGLYLVGRFP NWDRWAEWNG
501: KYRDDLRRFI KGDPGMKGVL ATRISGSADL YQVNQRKPHH GVNFIIAHDG FTLCDLVSYN LKHNDANGEG GRDGCNDNFS WNCGVEGETN DSNVLALRSR
601: QMKNFHVALM ISQGTPMMLM GDEYGHTRYG NNNSYGHDTC INNFQWEQLA ERRYGHFRFF SEMIKFRQNH PILKRDRFLS KNDVTWHEDC WDNLESKFLA
701: FTIHDHNSGG DIYLAFNAHD YFVDAVIPPA PHHKSWNRVV DTNLESPNDI TPEGVPLTGS GYRIASYSSI LLKAKP
001: MLTSPSSSST YDPFSSNFSP SLTNAFSSSF TIPMGLKLSR RVTRARIFSR KIKDRSTLKV TCRRAHERVV EEEASTMTET KLFKVSSGEV SPLGVSQVDK
101: GINFALFSQN ATSVTLCLSL SQSGKDDTDD DGMIELVLDP SVNKTGDTWH ICVEDLPLNN VLYGYRVDGP GEWQQGHRFD RSILLLDPYA KLVKGHSSFG
201: DSSQKFAQFY GTYDFESSPF DWGDDYKFPN IPEKDLVIYE MNVRAFTADE SSGMDPAIGG SYLGFIEKIP HLQDLGINAV ELLPVFEFDE LELQRRSNPR
301: DHMVNTWGYS TVNFFAPMSR YASGEGDPIK ASKEFKEMVK ALHSAGIEVI LDVVYNHTNE ADDKYPYTTS FRGIDNKVYY MLDPNNQLLN FSGCGNTLNC
401: NHPVVMELIL DSLRHWVTEY HVDGFRFDLA SVLCRATDGS PLSAPPLIRA IAKDSVLSRC KIIAEPWDCG GLYLVGKFPN WDRWAEWNGM YRDDVRRFIK
501: GDSGMKGSFA TRVSGSSDLY QVNQRKPYHG VNFVIAHDGF TLRDLVSYNF KHNEANGEGG NDGCNDNHSW NCGFEGETGD AHIKSLRTRQ MKNFHLALMI
601: SQGTPMMLMG DEYGHTRYGN NNSYGHDTSL NNFQWKELDA KKQNHFRFFS EVIKFRHSHH VLKHENFLTQ GEITWHEDNW DNSESKFLAF TLHDGIGGRD
701: IYVAFNAHDY FVKALIPQPP PGKQWFRVAD TNLESPDDFV REGVAGVADT YNVAPFSSIL LQSK
101: GINFALFSQN ATSVTLCLSL SQSGKDDTDD DGMIELVLDP SVNKTGDTWH ICVEDLPLNN VLYGYRVDGP GEWQQGHRFD RSILLLDPYA KLVKGHSSFG
201: DSSQKFAQFY GTYDFESSPF DWGDDYKFPN IPEKDLVIYE MNVRAFTADE SSGMDPAIGG SYLGFIEKIP HLQDLGINAV ELLPVFEFDE LELQRRSNPR
301: DHMVNTWGYS TVNFFAPMSR YASGEGDPIK ASKEFKEMVK ALHSAGIEVI LDVVYNHTNE ADDKYPYTTS FRGIDNKVYY MLDPNNQLLN FSGCGNTLNC
401: NHPVVMELIL DSLRHWVTEY HVDGFRFDLA SVLCRATDGS PLSAPPLIRA IAKDSVLSRC KIIAEPWDCG GLYLVGKFPN WDRWAEWNGM YRDDVRRFIK
501: GDSGMKGSFA TRVSGSSDLY QVNQRKPYHG VNFVIAHDGF TLRDLVSYNF KHNEANGEGG NDGCNDNHSW NCGFEGETGD AHIKSLRTRQ MKNFHLALMI
601: SQGTPMMLMG DEYGHTRYGN NNSYGHDTSL NNFQWKELDA KKQNHFRFFS EVIKFRHSHH VLKHENFLTQ GEITWHEDNW DNSESKFLAF TLHDGIGGRD
701: IYVAFNAHDY FVKALIPQPP PGKQWFRVAD TNLESPDDFV REGVAGVADT YNVAPFSSIL LQSK
Arabidopsis Description
ISA3Isoamylase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M0S5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.