Factsheet for TraesCS5A01G248700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G246400.1	Wheat	plastid	96.26	96.13
HORVU5Hr1G070160.1	Barley	plastid	93.81	93.69
TraesCS5D01G255800.1	Wheat	plastid	93.55	93.43
KXG35819	Sorghum	plastid	79.23	79.12
Zm00001d020799_P003	Maize	mitochondrion	78.97	76.31
Os09t0469400-01	Rice	plastid	33.16	75.81
Zm00001d005949_P001	Maize	cytosol, mitochondrion, vacuole	26.71	74.19
GSMUA_Achr9P14980_001	Banana	cytosol	67.74	73.43
PGSC0003DMT400018765	Potato	cytosol	21.29	72.05
CDY05042	Canola	cytosol	25.42	71.64
CDX90708	Canola	plastid	65.29	67.29
Bra000667.1-P	Field mustard	plastid	62.19	66.94
AT4G09020.1	Thale cress	plastid	65.29	66.23
CDY70211	Canola	plastid	47.1	66.12
KRH53006	Soybean	plastid	65.55	65.8
VIT_18s0001g06520.t01	Wine grape	plastid	65.42	65.42
Solyc06g009220.2.1	Tomato	plastid	62.19	65.22
KRH62296	Soybean	plastid	64.26	63.6
CDX77333	Canola	cytosol	8.26	60.95
CDX77349	Canola	mitochondrion	29.29	58.21
Bra014108.1-P	Field mustard	cytosol	15.35	57.49
Bra014111.1-P	Field mustard	mitochondrion	10.32	55.94
PGSC0003DMT400018766	Potato	cytosol	17.16	53.85
CDY60217	Canola	extracellular	10.19	45.93
TraesCS7A01G251400.1	Wheat	mitochondrion, plastid	39.48	38.73
TraesCS1A01G247100.1	Wheat	mitochondrion, plastid	31.23	30.52
TraesCS7A01G133500.2	Wheat	golgi	13.94	11.21

Protein Annotations

Gene3D:2.60.40.10	Gene3D:2.60.40.1180	MapMan:3.2.2.6	MapMan:3.2.3.3.2.1	Gene3D:3.20.20.80	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:Glyco_hydro_13_N	InterPro:Glyco_hydro_13_cat_dom	InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780	InterPro:IPR013783
InterPro:Ig-like_fold	InterPro:Ig_E-set	PFAM:PF00128	PFAM:PF02922	PANTHER:PTHR43002	SMART:SM00642
SUPFAM:SSF51011	SUPFAM:SSF51445	SUPFAM:SSF81296	EnsemblPlantsGene:TraesCS5A01G248700	EnsemblPlants:TraesCS5A01G248700.1	TIGR:cd02856
TIGR:cd11326	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5A:-:462862741..462873669

Molecular Weight (calculated)

86079.1 Da

IEP (calculated)

6.542

GRAVY (calculated)

-0.428

Length

775 amino acids

Sequence
(BLAST)

001: MDSAASTNRS PLRPAAAATA RRSSSSVRPA LPNRVAASRL GVAPGCGGGQ FGKAQRFRSV RSTSVGAQTG NAGRIVTEER ESATAGTEMP LKYSSGKASP
101: LGVSQVESGL NFAIFSQNAS SVTLCIKLPE RGTKDEESEK VVEFALDCQK NKTGDIWHVS VEGLPTSGVL YGYRVNGPQG WEQGHRFDSN IILLDPYAKL
201: VSGRNYFGVD NGKPSQPFGT YDFDSSPFDW GADYQLPHLP ETDLVIYEMN VRAFTADESS GLDAAVRGSY LGFIDKIPHL LELGVNAVEL LPVFEFDELE
301: LKRYPNPRDH MVNTWGYSTI NFFAPMTRYA SAGGGPLAAS RELKQMVKAL HKAGIEVILD VVYNHTNEAD DANPYVTSFR GIDNKVYYML DPKNNSQLLN
401: FSGCGNTLNC NHPVVMELVL DSLRHWVTEY HIDGFRFDLA SVLCRGPDGS PLDAPPLIRE IAKDSVLSRC KIIAEPWDCG GLYLVGRFPN WDRWAEWNGK
501: YRDDLRRFIK GDPGMKGVLA TRVSGSADLY QVNQRKPHHG VNFIIAHDGF TLCDLVSYNL KHNDANGEGG RDGCNDNFSW NCGVEGETND SNVLALRSRQ
601: MKNFHVALMI SQGTPMMLMG DEYGHTRYGN NNSYGHDTCI NNFQWGQLAE RRYGHFRFFS EMIKFRQNHP ILKRDRFLSK NDVTWHEDCW DNLESKFLAF
701: TIHDHNSGGD IYLAFNAHDY SVDAVIPPAP QHKHWNRVVD TNLESPNDIA PEGVPLTGSG YRIAPFSSIL LKASP

Best Arabidopsis Sequence Match ( AT4G09020.1 )
(BLAST)

001: MLTSPSSSST YDPFSSNFSP SLTNAFSSSF TIPMGLKLSR RVTRARIFSR KIKDRSTLKV TCRRAHERVV EEEASTMTET KLFKVSSGEV SPLGVSQVDK
101: GINFALFSQN ATSVTLCLSL SQSGKDDTDD DGMIELVLDP SVNKTGDTWH ICVEDLPLNN VLYGYRVDGP GEWQQGHRFD RSILLLDPYA KLVKGHSSFG
201: DSSQKFAQFY GTYDFESSPF DWGDDYKFPN IPEKDLVIYE MNVRAFTADE SSGMDPAIGG SYLGFIEKIP HLQDLGINAV ELLPVFEFDE LELQRRSNPR
301: DHMVNTWGYS TVNFFAPMSR YASGEGDPIK ASKEFKEMVK ALHSAGIEVI LDVVYNHTNE ADDKYPYTTS FRGIDNKVYY MLDPNNQLLN FSGCGNTLNC
401: NHPVVMELIL DSLRHWVTEY HVDGFRFDLA SVLCRATDGS PLSAPPLIRA IAKDSVLSRC KIIAEPWDCG GLYLVGKFPN WDRWAEWNGM YRDDVRRFIK
501: GDSGMKGSFA TRVSGSSDLY QVNQRKPYHG VNFVIAHDGF TLRDLVSYNF KHNEANGEGG NDGCNDNHSW NCGFEGETGD AHIKSLRTRQ MKNFHLALMI
601: SQGTPMMLMG DEYGHTRYGN NNSYGHDTSL NNFQWKELDA KKQNHFRFFS EVIKFRHSHH VLKHENFLTQ GEITWHEDNW DNSESKFLAF TLHDGIGGRD
701: IYVAFNAHDY FVKALIPQPP PGKQWFRVAD TNLESPDDFV REGVAGVADT YNVAPFSSIL LQSK

Arabidopsis Description

ISA3Isoamylase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M0S5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.