Factsheet for Bra014108.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra014111.1-P	Field mustard	mitochondrion	61.35	88.81
PGSC0003DMT400018766	Potato	cytosol	28.02	23.48
Bra000667.1-P	Field mustard	plastid	70.05	20.14
PGSC0003DMT400018765	Potato	cytosol	22.22	20.09
AT4G09020.1	Thale cress	plastid	64.73	17.54
GSMUA_Achr9P14980_001	Banana	cytosol	57.0	16.5
KRH53006	Soybean	plastid	61.35	16.45
KRH62296	Soybean	plastid	60.87	16.09
VIT_18s0001g06520.t01	Wine grape	plastid	59.42	15.87
TraesCS5A01G248700.1	Wheat	plastid	57.49	15.35
TraesCS5B01G246400.1	Wheat	plastid	57.49	15.34
TraesCS5D01G255800.1	Wheat	plastid	57.49	15.34
HORVU5Hr1G070160.1	Barley	plastid	56.52	15.08
KXG35819	Sorghum	plastid	56.52	15.08
Solyc06g009220.2.1	Tomato	plastid	46.86	13.13
Zm00001d005948_P001	Maize	golgi, plasma membrane, plastid	25.12	12.44
Bra005001.1-P	Field mustard	plastid	36.23	9.28
Bra030528.1-P	Field mustard	cytosol	26.09	7.34
Bra033388.1-P	Field mustard	plastid	26.57	6.49
Bra040385.1-P	Field mustard	cytosol, plasma membrane, plastid	9.18	2.53
Bra009461.1-P	Field mustard	plastid	12.08	1.87
Os09t0469400-01	Rice	plastid	0.97	0.59

Protein Annotations

EnsemblPlants:Bra014108.1	EnsemblPlants:Bra014108.1-P	EnsemblPlantsGene:Bra014108	Gene3D:3.20.20.80	InterPro:Glycoside_hydrolase_SF	PANTHER:PTHR43002
PANTHER:PTHR43002:SF3	SEG:seg	SUPFAM:SSF51011	SUPFAM:SSF51445	UniParc:UPI0002546907	UniProt:M4DC95
MapMan:35.1	:	:	:	:	:

Description

AT4G09020 (E=2e-037) ATISA3, ISA3 | ISA3 (ISOAMYLASE 3); alpha-amylase/ isoamylase

Coordinates

chrA08:+:3415613..3418208

Molecular Weight (calculated)

23877.1 Da

IEP (calculated)

8.633

GRAVY (calculated)

-0.544

Length

207 amino acids

Sequence
(BLAST)

001: MTNKKRKKKN NELRYTLRFR SFTSGIAEPW DYGGLYFVGE FPNWDGWAEW NGMYRDDVRR FMKGMKGSFA TRVAGSSDLY QVNQRNPPYH GVNFIIAHDG
101: FTLRDHTILR GNWQMKNFHL ALMISQSGLP ASTDNWDNPE SKFLAFTLHH CVSGQDVYAA FNAHDYFVTV RKTMADTNLE SPDDFVKECV AETYNVAPFS
201: SIPLKSM

Best Arabidopsis Sequence Match ( AT4G09020.1 )
(BLAST)

001: MLTSPSSSST YDPFSSNFSP SLTNAFSSSF TIPMGLKLSR RVTRARIFSR KIKDRSTLKV TCRRAHERVV EEEASTMTET KLFKVSSGEV SPLGVSQVDK
101: GINFALFSQN ATSVTLCLSL SQSGKDDTDD DGMIELVLDP SVNKTGDTWH ICVEDLPLNN VLYGYRVDGP GEWQQGHRFD RSILLLDPYA KLVKGHSSFG
201: DSSQKFAQFY GTYDFESSPF DWGDDYKFPN IPEKDLVIYE MNVRAFTADE SSGMDPAIGG SYLGFIEKIP HLQDLGINAV ELLPVFEFDE LELQRRSNPR
301: DHMVNTWGYS TVNFFAPMSR YASGEGDPIK ASKEFKEMVK ALHSAGIEVI LDVVYNHTNE ADDKYPYTTS FRGIDNKVYY MLDPNNQLLN FSGCGNTLNC
401: NHPVVMELIL DSLRHWVTEY HVDGFRFDLA SVLCRATDGS PLSAPPLIRA IAKDSVLSRC KIIAEPWDCG GLYLVGKFPN WDRWAEWNGM YRDDVRRFIK
501: GDSGMKGSFA TRVSGSSDLY QVNQRKPYHG VNFVIAHDGF TLRDLVSYNF KHNEANGEGG NDGCNDNHSW NCGFEGETGD AHIKSLRTRQ MKNFHLALMI
601: SQGTPMMLMG DEYGHTRYGN NNSYGHDTSL NNFQWKELDA KKQNHFRFFS EVIKFRHSHH VLKHENFLTQ GEITWHEDNW DNSESKFLAF TLHDGIGGRD
701: IYVAFNAHDY FVKALIPQPP PGKQWFRVAD TNLESPDDFV REGVAGVADT YNVAPFSSIL LQSK

Arabidopsis Description

ISA3Isoamylase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M0S5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.