Factsheet for Bra033388.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 8
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89902	Canola	plastid	91.27	91.92
Bra030528.1-P	Field mustard	cytosol	66.98	77.17
AT1G03310.2	Thale cress	plastid	72.76	69.95
GSMUA_Achr6P16200_001	Banana	cytosol, plasma membrane, vacuole	30.78	51.28
KRG95479	Soybean	mitochondrion	51.3	50.29
KRH67160	Soybean	plastid	50.59	49.54
HORVU1Hr1G062690.3	Barley	cytosol	41.98	49.51
VIT_07s0104g00370.t01	Wine grape	plasma membrane, plastid, vacuole	51.3	49.32
GSMUA_Achr6P16190_001	Banana	cytosol, plasma membrane, vacuole	42.81	48.02
Os05t0393700-01	Rice	cytosol, plastid	41.39	47.24
Solyc09g064800.1.1	Tomato	plastid	48.0	47.0
PGSC0003DMT400002502	Potato	plastid	48.47	46.81
TraesCS1A01G247100.1	Wheat	mitochondrion, plastid	43.51	46.53
TraesCS1B01G257700.1	Wheat	mitochondrion, plastid	42.92	46.19
TraesCS1D01G246300.1	Wheat	plastid	42.69	45.88
OQU77947	Sorghum	plastid	43.04	45.62
Zm00001d038121_P001	Maize	plastid	43.16	41.64
Bra000667.1-P	Field mustard	plastid	26.53	31.25
Bra014108.1-P	Field mustard	cytosol	6.49	26.57
Bra005001.1-P	Field mustard	plastid	24.53	25.74
Bra014111.1-P	Field mustard	mitochondrion	4.13	24.48
Bra040385.1-P	Field mustard	cytosol, plasma membrane, plastid	7.08	8.0
Bra009461.1-P	Field mustard	plastid	10.97	6.97

Protein Annotations

Gene3D:2.60.40.10	Gene3D:2.60.40.1180	MapMan:3.2.2.6	MapMan:3.2.3.3.2.1	Gene3D:3.20.20.80	EnsemblPlantsGene:Bra033388
EnsemblPlants:Bra033388.1	EnsemblPlants:Bra033388.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_13_N	InterPro:Glyco_hydro_13_cat_dom	InterPro:Glyco_hydro_b
InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780	InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:Ig_E-set	UniProt:M4EX53
PFAM:PF00128	PFAM:PF02922	PANTHER:PTHR43002	PANTHER:PTHR43002:SF2	SMART:SM00642	SUPFAM:SSF51011
SUPFAM:SSF51445	SUPFAM:SSF81296	UniParc:UPI0002544A04	SEG:seg	:	:

Description

AT1G03310 (E=0.0) ATISA2, ISA2, DBE1, BE2 | isoamylase, putative / starch debranching enzyme, putative

Coordinates

chrA10:-:3918268..3920814

Molecular Weight (calculated)

95315.9 Da

IEP (calculated)

6.023

GRAVY (calculated)

-0.298

Length

848 amino acids

Sequence
(BLAST)

001: MAVWSPSVGI GSCCLLHNVI TEAWRFPSTC FSTCNNNTKR GSKTLRVTSA LQSYHRLSKI CASKTSTELK EEVSTRSSQV DEPKKVTTSY SFRTKSGALV
101: KVKVEKKREK YSIMVYVSSL ELIGGDDGKS SSLVMVWGVY RSDSSCFLPL DFESSSQDSQ THTTETLFVK GSLSESKLGL EFDGKESPFS LSFRLKNPNG
201: GLEMLTHRDT NFCVPVGFTA GRPLPLGLSS GPDEDNSWNF AFFSRNAKSV VLCLYDDTTT DKPALELDLD PYINRTGDVW HASVEKTWEF VRYGYRCLSE
301: EEAEDIVLDP YARVIEKFLG SLSKNPCFDW GRDVSPNIPL EKLIVYRLNV KGFTQHKSSK LPTNIAGTFT GVAEKVNHLK TLGTNAVLLE PIFSFSEQNG
401: PYFPFHFFSP MDMYGPSNSM KEMVKRLHSE GIEVLLEVVF THTADSGALH GIDESCYYLD SKSYVNCNFP VVQELVLESL RYWVTEFHVD GFCFINASSL
501: LRGVHGEHLS RPPLVEAISF DPLLAGRKLI ADCWDPHDMK MPKEVRFPHW KRWAEVNTRY CRNVRNFVRG RGVLSDLATR ICGSGDVFTD GRGPAFSFNY
601: ISRNSGLSLV DLVSFSGPEV ASELSWNCGE EGATNKSAVL QTRLKQIRNF LFIQYISLGV PVLNMGDECG VSTRGLTSRK PFDWNMLASA FGVQITQFIS
701: FMTSVRGRRS DVFQRRNFLK PENIFWYAND QTTPKWEDPA SKFLALEIKA EREEETTASL VEPTEPKNND LFIGFNASDQ PENVILPPLP KGSKWRRLVD
801: TALPSPGFFS VEGETVVAEE EEEEMNQPVM YEMKPYSCTL FETINATA

Best Arabidopsis Sequence Match ( AT1G03310.2 )
(BLAST)

001: MAAWSPSVGI GSCCLNNGIT RTWKFPSARL FTGRKNKIKL GSETLMFTRK RFMGDLVTSA LQSYQFSKIC ASKTSIELRE ALSSRRAEAD DLKKVTSYSF
101: RTKAGALVKV KVEKKREKYS ILVYVSSLEL SGDDKSRLVM VWGVYRSDSS CFLPLDFENS SQDSQTHTTE TTFVKSSLSE LMLGLEFDGK ESPFYLSFHL
201: KLVSGRDPDG QEMLTHRDTD FCIPVGFTAG HPLPLGLSSG PDDDSWNFSF FSRSSTNVVL CLYDDSTTDK PALELDLDPY VNRTGDVWHA SVDNTWDFVR
301: YGYRCKETAH SKEDVDVEGE PIVLDPYATV VGKSVSQKYL GSLSKSPSFD WGEDVSPNIP LEKLLVYRLN VKGFTQHRSS KLPSNVAGTF SGVAEKVSHL
401: KTLGTNAVLL EPIFSFSEQK GPYFPFHFFS PMDIYGPSNS LESAVNSMKV MVKKLHSEGI EVLLEVVFTH TADSGALRGI DDSSYYYKGR ANDLDSKSYL
501: NCNYPVVQQL VLESLRYWVT EFHVDGFCFI NASSLLRGVH GEQLSRPPLV EAIAFDPLLA ETKLIADCWD PLEMMPKEVR FPHWKRWAEL NTRYCRNVRN
601: FLRGRGVLSD LATRICGSGD VFTDGRGPAF SFNYISRNSG LSLVDIVSFS GPELASELSW NCGEEGATNK SAVLQRRLKQ IRNFLFIQYI SLGVPVLNMG
701: DECGISTRGS PLLESRKPFD WNLLASAFGT QITQFISFMT SVRARRSDVF QRRDFLKPEN IVWYANDQTT PKWEDPASKF LALEIKSESE EEETASLAEP
801: NEPKSNDLFI GFNASDHPES VVLPSLPDGS KWRRLVDTAL PFPGFFSVEG ETVVAEEPLQ QLVVYEMKPY SCTLFETINT TA

Arabidopsis Description

ISA2ISA2 [Source:UniProtKB/TrEMBL;Acc:A0A178WGA8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.