Factsheet for TraesCS1B01G257700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 5
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G246300.1	Wheat	plastid	95.3	95.18
TraesCS1A01G247100.1	Wheat	mitochondrion, plastid	93.4	92.81
HORVU1Hr1G062690.3	Barley	cytosol	79.82	87.48
Os05t0393700-01	Rice	cytosol, plastid	69.16	73.35
OQU77947	Sorghum	plastid	73.22	72.12
Zm00001d038121_P001	Maize	plastid	69.54	62.34
GSMUA_Achr6P16200_001	Banana	cytosol, plasma membrane, vacuole	35.28	54.62
GSMUA_Achr6P16190_001	Banana	cytosol, plasma membrane, vacuole	49.75	51.85
Bra030528.1-P	Field mustard	cytosol	46.19	49.46
CDY15458	Canola	cytosol	45.43	48.84
KRG95479	Soybean	mitochondrion	48.73	44.39
VIT_07s0104g00370.t01	Wine grape	plasma membrane, plastid, vacuole	49.24	43.99
Solyc09g064800.1.1	Tomato	plastid	48.22	43.88
PGSC0003DMT400002502	Potato	plastid	48.73	43.74
KRH67160	Soybean	plastid	47.72	43.42
CDY18165	Canola	plastid	45.05	43.4
CDX89902	Canola	plastid	46.19	43.23
Bra033388.1-P	Field mustard	plastid	46.19	42.92
AT1G03310.2	Thale cress	plastid	47.21	42.18
CDX86680	Canola	plastid	43.65	41.55
TraesCS5B01G246400.1	Wheat	plastid	30.33	30.8
TraesCS7B01G139700.2	Wheat	plastid	28.05	27.97
TraesCS7B01G034600.1	Wheat	plastid	12.56	10.37

Protein Annotations

Gene3D:2.60.40.10	Gene3D:2.60.40.1180	MapMan:3.2.2.6	MapMan:3.2.3.3.2.1	Gene3D:3.20.20.80	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536
GO:GO:0010021	GO:GO:0016787	GO:GO:0019156	InterPro:Glyco_hydro_13_N	InterPro:Glyco_hydro_13_cat_dom	InterPro:Glyco_hydro_b
InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780	InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:Ig_E-set	PFAM:PF00128
PFAM:PF02922	PANTHER:PTHR43002	PANTHER:PTHR43002:SF2	SMART:SM00642	SUPFAM:SSF51011	SUPFAM:SSF51445
SUPFAM:SSF81296	EnsemblPlantsGene:TraesCS1B01G257700	EnsemblPlants:TraesCS1B01G257700.1	TIGR:cd02856	TIGR:cd11346	SEG:seg

Description

No Description!

Coordinates

chr1B:-:453513166..453515532

Molecular Weight (calculated)

85516.2 Da

IEP (calculated)

6.896

GRAVY (calculated)

-0.024

Length

788 amino acids

Sequence
(BLAST)

001: MASLLAPPAS TRGILPPPRR PALTPRAARS CYRFRTDDDG VVDVAVAAGE GGGYTVGVEV PPLPGARRRE GGLLLRPAGS AEAVPLDGAC PAVELSFRAP
101: PAPFSLSFLL TDGEGAEIRT HRRTPFRVPI GVGPGSPAPL GLSLSEGGAA NFALYSRSAK GVVLCLYGGG GGGKPALEIE LDPYVNRTGN VWHVSLESVE
201: GYGSYGFRCG LFGMGYPLLD PYAKVIGDLV AANSVHVKGI TAPSMSCLGS LANPPSYSWG RDEQPRLPLE KLVVYRANVA LFTKDKSSGL LDNVAGTFSG
301: VAAKIQHFRS LGVNAVLLEP VFQFDQVKGP YFPYHFFSPM ASYSGDGCSA SAITAMKDMV KAMHRNGIEV LLEVVFTHTA EGEADGQMIS ISGIDNSSYY
401: ITDEIAGCKS VILNCNSPVT QNLILDSLRH WVIDFHVDGF CFINAPFLVR GPRGEYLSRP PLLESIAFDP VLSKTKIIAD PWSPLDISNV QFPFPHWKRW
501: SEMNTRFSID VRNFLKGEAL IGALATRLCG SGDLFSNRGP AFSFNYVSRN SGLTLVDLVS FSNGDLASES SWNCGEEGPS EDSVVLQKRL RQIRNFIFIL
601: FVSLGIPVLN MGDECGHSSA GSASYKDRVP LNWKALKTSF VKEVTGFISF LAALRSRRGD IFQRREFLKL ENISWHGNNL SEPRWEDPTS KFLCMHIIAE
701: NDVNTPELTK GNLYICFNAN EEPASATLPA PAEGSVWLRL VDTSLALPGF FTTESNLKVH KVLGYSSYEV KAHSCVLFES KRDLPQFL

Best Arabidopsis Sequence Match ( AT1G03310.2 )
(BLAST)

001: MAAWSPSVGI GSCCLNNGIT RTWKFPSARL FTGRKNKIKL GSETLMFTRK RFMGDLVTSA LQSYQFSKIC ASKTSIELRE ALSSRRAEAD DLKKVTSYSF
101: RTKAGALVKV KVEKKREKYS ILVYVSSLEL SGDDKSRLVM VWGVYRSDSS CFLPLDFENS SQDSQTHTTE TTFVKSSLSE LMLGLEFDGK ESPFYLSFHL
201: KLVSGRDPDG QEMLTHRDTD FCIPVGFTAG HPLPLGLSSG PDDDSWNFSF FSRSSTNVVL CLYDDSTTDK PALELDLDPY VNRTGDVWHA SVDNTWDFVR
301: YGYRCKETAH SKEDVDVEGE PIVLDPYATV VGKSVSQKYL GSLSKSPSFD WGEDVSPNIP LEKLLVYRLN VKGFTQHRSS KLPSNVAGTF SGVAEKVSHL
401: KTLGTNAVLL EPIFSFSEQK GPYFPFHFFS PMDIYGPSNS LESAVNSMKV MVKKLHSEGI EVLLEVVFTH TADSGALRGI DDSSYYYKGR ANDLDSKSYL
501: NCNYPVVQQL VLESLRYWVT EFHVDGFCFI NASSLLRGVH GEQLSRPPLV EAIAFDPLLA ETKLIADCWD PLEMMPKEVR FPHWKRWAEL NTRYCRNVRN
601: FLRGRGVLSD LATRICGSGD VFTDGRGPAF SFNYISRNSG LSLVDIVSFS GPELASELSW NCGEEGATNK SAVLQRRLKQ IRNFLFIQYI SLGVPVLNMG
701: DECGISTRGS PLLESRKPFD WNLLASAFGT QITQFISFMT SVRARRSDVF QRRDFLKPEN IVWYANDQTT PKWEDPASKF LALEIKSESE EEETASLAEP
801: NEPKSNDLFI GFNASDHPES VVLPSLPDGS KWRRLVDTAL PFPGFFSVEG ETVVAEEPLQ QLVVYEMKPY SCTLFETINT TA

Arabidopsis Description

ISA2ISA2 [Source:UniProtKB/TrEMBL;Acc:A0A178WGA8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.