CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038121_P001	Maize	plastid	86.62	78.84
Os05t0393700-01	Rice	cytosol, plastid	71.12	76.58
HORVU1Hr1G062690.3	Barley	cytosol	68.38	76.08
TraesCS1A01G247100.1	Wheat	mitochondrion, plastid	72.62	73.27
TraesCS1B01G257700.1	Wheat	mitochondrion, plastid	72.12	73.22
TraesCS1D01G246300.1	Wheat	plastid	71.5	72.5
GSMUA_Achr6P16200_001	Banana	cytosol, plasma membrane, vacuole	35.25	55.4
GSMUA_Achr6P16190_001	Banana	cytosol, plasma membrane, vacuole	48.62	51.45
Bra030528.1-P	Field mustard	cytosol	46.5	50.54
CDY15458	Canola	cytosol	45.5	49.66
KRG95479	Soybean	mitochondrion	49.38	45.66
KRH67160	Soybean	plastid	48.88	45.15
VIT_07s0104g00370.t01	Wine grape	plasma membrane, plastid, vacuole	49.0	44.44
CDY18165	Canola	plastid	45.12	44.13
CDX89902	Canola	plastid	46.25	43.94
Solyc09g064800.1.1	Tomato	plastid	47.12	43.53
PGSC0003DMT400002502	Potato	plastid	47.75	43.51
Bra033388.1-P	Field mustard	plastid	45.62	43.04
CDX86680	Canola	plastid	43.38	41.91
AT1G03310.2	Thale cress	plastid	46.12	41.84
KXG35819	Sorghum	plastid	31.12	32.09
KXG25605	Sorghum	plastid	26.5	26.77
KXG25811	Sorghum	plastid	12.75	10.58

Protein Annotations

Gene3D:2.60.40.10	Gene3D:2.60.40.1180	MapMan:3.2.2.6	MapMan:3.2.3.3.2.1	Gene3D:3.20.20.80	EntrezGene:8076863
UniProt:C5YXK3	ProteinID:EES19481.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0005977	GO:GO:0005983
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	GO:GO:0010021	GO:GO:0016787	GO:GO:0019156	GO:GO:0043033
InterPro:Glyco_hydro_13_N	InterPro:Glyco_hydro_13_cat_dom	InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780	InterPro:IPR013783
InterPro:Ig-like_fold	InterPro:Ig_E-set	EnsemblPlants:OQU77947	ProteinID:OQU77947	ProteinID:OQU77947.1	ProteinID:OQU77948.1
ProteinID:OQU77949.1	PFAM:PF00128	PFAM:PF02922	PANTHER:PTHR43002	PANTHER:PTHR43002:SF2	SMART:SM00642
EnsemblPlantsGene:SORBI_3009G127500	SUPFAM:SSF51011	SUPFAM:SSF51445	SUPFAM:SSF81296	unigene:Sbi.15504	UniParc:UPI0001A892C4
RefSeq:XP_002441051.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:48109654..48113020

Molecular Weight (calculated)

86978.6 Da

IEP (calculated)

7.167

GRAVY (calculated)

-0.071

Length

800 amino acids

Sequence
(BLAST)

001: MASSSLPAPP APPSSSWRGL TPRRPTPRRG PLLLARAAAR SCRYRFRTDD DGVVDVAVAG KDGDAGYAVA VEAPAHGRRS GGLVLRPAGS GEGVSLAPAA
101: PGGALAAELS YDGARAPFHV SFTLADATGA EIRTHRGTSF RVPVGVGRGC PSPLGLSRSK DGAANFAVYS KSAKGMVLCL FGGGDEPALE IELDPYVHRT
201: GDVWHVSMES VEGYASYGFR SGLFAMFGID RPLLDPYAKV IGDFVPADSV NEDGLAVPAV RCLASLKNAP SYDWGRDKHP CLPLEKLVVY RANVALFTKD
301: KSSGLADDVA GTFSGMAAKV KHFRHLGVNA VLLEPVFPYH QVKGPYFPYH FFSPMSLYSS ECSSVSAIKS MKDMVKTMHR NGIEVLLEVV FTHTAEGGAE
401: CQMISLRGID GSSYYIADGI AGCKASVLNC NHPVTQKLIL DSLRHWVLDF HVDGFCFINA PFLVRGPGGE GLSRPPLLEA IAFDPVLSKT KIIADPWSPL
501: DISNVQFPFP HWKRWAEMNT RFSMDVRKFL KGEALISDLA TRLCGSGDLF SSRGPAFSFN YVSRNSGLTL VDLVSFSSDE LGSEFSWNCG EEGPSENNAV
601: LQTRLRQIRN LLFILFISLG IPVLNMGDEC GHSAVGSTSY KDRGPLNWKA LKTTFVKEVT GFISFLSALR SRRADIFQRR EFLKFENIHW YGSDLSEPRW
701: EDPTSNFLCM HINAELDEKL PDSTGGDLYI CFNANEESAS ATLPAIAEGS MWLRLVDTSL AFPGFFSRGS NPEIHKVLGF SSYQVNAHSC VLFESKRVLS

Best Arabidopsis Sequence Match ( AT1G03310.2 )
(BLAST)

001: MAAWSPSVGI GSCCLNNGIT RTWKFPSARL FTGRKNKIKL GSETLMFTRK RFMGDLVTSA LQSYQFSKIC ASKTSIELRE ALSSRRAEAD DLKKVTSYSF
101: RTKAGALVKV KVEKKREKYS ILVYVSSLEL SGDDKSRLVM VWGVYRSDSS CFLPLDFENS SQDSQTHTTE TTFVKSSLSE LMLGLEFDGK ESPFYLSFHL
201: KLVSGRDPDG QEMLTHRDTD FCIPVGFTAG HPLPLGLSSG PDDDSWNFSF FSRSSTNVVL CLYDDSTTDK PALELDLDPY VNRTGDVWHA SVDNTWDFVR
301: YGYRCKETAH SKEDVDVEGE PIVLDPYATV VGKSVSQKYL GSLSKSPSFD WGEDVSPNIP LEKLLVYRLN VKGFTQHRSS KLPSNVAGTF SGVAEKVSHL
401: KTLGTNAVLL EPIFSFSEQK GPYFPFHFFS PMDIYGPSNS LESAVNSMKV MVKKLHSEGI EVLLEVVFTH TADSGALRGI DDSSYYYKGR ANDLDSKSYL
501: NCNYPVVQQL VLESLRYWVT EFHVDGFCFI NASSLLRGVH GEQLSRPPLV EAIAFDPLLA ETKLIADCWD PLEMMPKEVR FPHWKRWAEL NTRYCRNVRN
601: FLRGRGVLSD LATRICGSGD VFTDGRGPAF SFNYISRNSG LSLVDIVSFS GPELASELSW NCGEEGATNK SAVLQRRLKQ IRNFLFIQYI SLGVPVLNMG
701: DECGISTRGS PLLESRKPFD WNLLASAFGT QITQFISFMT SVRARRSDVF QRRDFLKPEN IVWYANDQTT PKWEDPASKF LALEIKSESE EEETASLAEP
801: NEPKSNDLFI GFNASDHPES VVLPSLPDGS KWRRLVDTAL PFPGFFSVEG ETVVAEEPLQ QLVVYEMKPY SCTLFETINT TA

Arabidopsis Description

ISA2ISA2 [Source:UniProtKB/TrEMBL;Acc:A0A178WGA8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.