CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
extracellular 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033388.1-P	Field mustard	plastid	91.92	91.27
CDY18165	Canola	plastid	84.09	86.55
CDY15458	Canola	cytosol	66.86	76.81
AT1G03310.2	Thale cress	plastid	76.84	73.36
CDX86680	Canola	plastid	68.41	69.57
GSMUA_Achr6P16200_001	Banana	cytosol, plasma membrane, vacuole	31.24	51.67
KRG95479	Soybean	mitochondrion	52.85	51.45
KRH67160	Soybean	plastid	52.38	50.92
VIT_07s0104g00370.t01	Wine grape	plasma membrane, plastid, vacuole	53.09	50.68
HORVU1Hr1G062690.3	Barley	cytosol	42.28	49.51
GSMUA_Achr6P16190_001	Banana	cytosol, plasma membrane, vacuole	43.94	48.94
Solyc09g064800.1.1	Tomato	plastid	50.12	48.73
PGSC0003DMT400002502	Potato	plastid	50.48	48.41
Os05t0393700-01	Rice	cytosol, plastid	42.64	48.32
TraesCS1A01G247100.1	Wheat	mitochondrion, plastid	43.82	46.53
TraesCS1D01G246300.1	Wheat	plastid	43.47	46.39
OQU77947	Sorghum	plastid	43.94	46.25
TraesCS1B01G257700.1	Wheat	mitochondrion, plastid	43.23	46.19
Zm00001d038121_P001	Maize	plastid	43.82	41.98
CDY70211	Canola	plastid	21.14	32.25
CDX90708	Canola	plastid	27.43	30.72
CDX77333	Canola	cytosol	3.8	30.48
CDY60217	Canola	extracellular	5.58	27.33
CDY05042	Canola	cytosol	8.91	27.27
CDX74820	Canola	plastid	25.06	26.81
CDY20500	Canola	plastid	24.94	26.79
CDX77349	Canola	mitochondrion	11.76	25.38
CDY51316	Canola	plastid	11.05	9.59
CDX70233	Canola	plastid	10.81	9.45
CDY47998	Canola	cytosol	4.28	5.54

Protein Annotations

Gene3D:2.60.40.10	Gene3D:2.60.40.1180	MapMan:3.2.2.6	MapMan:3.2.3.3.2.1	Gene3D:3.20.20.80	GO:A0A078DLX3
EnsemblPlants:CDX89902	ProteinID:CDX89902	ProteinID:CDX89902.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00150383001	InterPro:Glyco_hydro_13_N
InterPro:Glyco_hydro_13_cat_dom	InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780	InterPro:IPR013783	InterPro:Ig-like_fold
InterPro:Ig_E-set	PFAM:PF00128	PFAM:PF02922	PANTHER:PTHR43002	PANTHER:PTHR43002:SF2	SMART:SM00642
SUPFAM:SSF51011	SUPFAM:SSF51445	SUPFAM:SSF81296	UniParc:UPI0004EEE897	SEG:seg	:

Description

BnaA10g01800D

Coordinates

chrLK031861:-:696205..699328

Molecular Weight (calculated)

94995.3 Da

IEP (calculated)

5.844

GRAVY (calculated)

-0.328

Length

842 amino acids

Sequence
(BLAST)

001: MAVWSLSPGI RSCCLLNDGI TETWRFPSTC FSTCNNNTKR GSKTLRVTSA LQSYYRLSKI RASKTSTELK EEVSTRSSQV DDLKKVTTSY SFRTKSGALV
101: KVKVEKKRDK YSIMVYVSSL ELSGCDDDDK SSSLVMVWGV YRSDSSCFLP LDFESSSQDT QTHTTETPFV KSSSSESKLG LEFDGKESPF YLSFRLKNPN
201: NGLEMLTHRD TNFCVPVGFT AGRPLPLGLS SGPDDDNSWN FAFFSRNAKS VVLCLYDDTT TDKPALELDL DPYINRTGDV WHASVEKTWE FVRYGYRCLS
301: EEEAEDIVLD PYARVIEKFL GSLSKNPCFD WGRDVSPNIP LEKLIVYRLN VKGFTQHKSS KLPTNIAGTF TGVAEKVNHL KTLGTNAVLL EPIFSFSEQN
401: GPYFPFHFFS PMDMYGPSNS MKEMVKRLHS EGIEVLLEVV FTHTADSGAL HGIDESCYYL DSKSYVNCNF PVVQELVLES LRYWVTEFHV DGFCFINASS
501: LLRGVHGEHL SRPPLVEAIS FDPLLAGRKL IADCWDPHDM KMPKEVRFPH WKRWAEVNTR YCRNVRNFVR GRGVLSDLAT RICGSGDVFT DGRGPAFSFN
601: YISRNSGLSL VDLVSFSGPE VASELSWNCG EEGATNKSAV LQTRLKQIRN FLFIQYISLG VPVLNMGDEC GVSTRGLTSR KPFDWNMLAS AFGVQITQFI
701: SFMTSVRGRR SDVFQRRNFL KPENIFWYAN DQTTPKWEDP ASKFLALEIK AEREEETTAS LNNDLFIGFN ASDQPENVIL PPLPKGSKWR RLVDTALPSP
801: GFFSVEGETV VAEEEEEEMN QPVMYEMKPY SCTLFETINA TA

Best Arabidopsis Sequence Match ( AT1G03310.2 )
(BLAST)

001: MAAWSPSVGI GSCCLNNGIT RTWKFPSARL FTGRKNKIKL GSETLMFTRK RFMGDLVTSA LQSYQFSKIC ASKTSIELRE ALSSRRAEAD DLKKVTSYSF
101: RTKAGALVKV KVEKKREKYS ILVYVSSLEL SGDDKSRLVM VWGVYRSDSS CFLPLDFENS SQDSQTHTTE TTFVKSSLSE LMLGLEFDGK ESPFYLSFHL
201: KLVSGRDPDG QEMLTHRDTD FCIPVGFTAG HPLPLGLSSG PDDDSWNFSF FSRSSTNVVL CLYDDSTTDK PALELDLDPY VNRTGDVWHA SVDNTWDFVR
301: YGYRCKETAH SKEDVDVEGE PIVLDPYATV VGKSVSQKYL GSLSKSPSFD WGEDVSPNIP LEKLLVYRLN VKGFTQHRSS KLPSNVAGTF SGVAEKVSHL
401: KTLGTNAVLL EPIFSFSEQK GPYFPFHFFS PMDIYGPSNS LESAVNSMKV MVKKLHSEGI EVLLEVVFTH TADSGALRGI DDSSYYYKGR ANDLDSKSYL
501: NCNYPVVQQL VLESLRYWVT EFHVDGFCFI NASSLLRGVH GEQLSRPPLV EAIAFDPLLA ETKLIADCWD PLEMMPKEVR FPHWKRWAEL NTRYCRNVRN
601: FLRGRGVLSD LATRICGSGD VFTDGRGPAF SFNYISRNSG LSLVDIVSFS GPELASELSW NCGEEGATNK SAVLQRRLKQ IRNFLFIQYI SLGVPVLNMG
701: DECGISTRGS PLLESRKPFD WNLLASAFGT QITQFISFMT SVRARRSDVF QRRDFLKPEN IVWYANDQTT PKWEDPASKF LALEIKSESE EEETASLAEP
801: NEPKSNDLFI GFNASDHPES VVLPSLPDGS KWRRLVDTAL PFPGFFSVEG ETVVAEEPLQ QLVVYEMKPY SCTLFETINT TA

Arabidopsis Description

ISA2ISA2 [Source:UniProtKB/TrEMBL;Acc:A0A178WGA8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.