Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 5
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY05042 | Canola | cytosol | 68.72 | 97.45 |
| CDX77333 | Canola | cytosol | 17.44 | 64.76 |
| PGSC0003DMT400018766 | Potato | cytosol | 31.54 | 49.8 |
| CDY60217 | Canola | extracellular | 18.72 | 42.44 |
| CDX90708 | Canola | plastid | 76.41 | 39.63 |
| AT4G09020.1 | Thale cress | plastid | 68.21 | 34.82 |
| GSMUA_Achr9P14980_001 | Banana | cytosol | 56.67 | 30.91 |
| KRH53006 | Soybean | plastid | 59.49 | 30.05 |
| VIT_18s0001g06520.t01 | Wine grape | plastid | 58.46 | 29.42 |
| TraesCS5A01G248700.1 | Wheat | plastid | 58.21 | 29.29 |
| TraesCS5D01G255800.1 | Wheat | plastid | 58.21 | 29.25 |
| TraesCS5B01G246400.1 | Wheat | plastid | 58.21 | 29.25 |
| KRH62296 | Soybean | plastid | 58.46 | 29.12 |
| HORVU5Hr1G070160.1 | Barley | plastid | 57.69 | 28.99 |
| KXG35819 | Sorghum | plastid | 56.67 | 28.48 |
| Solyc06g009220.2.1 | Tomato | plastid | 51.79 | 27.33 |
| Zm00001d005948_P001 | Maize | golgi, plasma membrane, plastid | 25.13 | 23.45 |
| CDX74820 | Canola | plastid | 37.69 | 18.68 |
| CDY20500 | Canola | plastid | 37.44 | 18.62 |
| PGSC0003DMT400018765 | Potato | cytosol | 10.51 | 17.9 |
| CDY70211 | Canola | plastid | 23.33 | 16.49 |
| CDY15458 | Canola | cytosol | 25.38 | 13.51 |
| CDX89902 | Canola | plastid | 25.38 | 11.76 |
| CDY18165 | Canola | plastid | 24.62 | 11.74 |
| CDX86680 | Canola | plastid | 24.87 | 11.71 |
| Os09t0469400-01 | Rice | plastid | 4.62 | 5.31 |
| CDY47998 | Canola | cytosol | 7.95 | 4.77 |
| CDY51316 | Canola | plastid | 10.51 | 4.23 |
| CDX70233 | Canola | plastid | 10.26 | 4.15 |
Protein Annotations
| EnsemblPlants:CDX77349 | EnsemblPlantsGene:GSBRNA2T00128145001 | Gene3D:2.60.40.1180 | Gene3D:3.20.20.80 | GO:A0A078CMU6 | InterPro:Glyco_hydro_b |
| InterPro:Glycoside_hydrolase_SF | InterPro:IPR013780 | InterPro:P-loop_NTPase | PANTHER:PTHR43002 | ProteinID:CDX77349 | ProteinID:CDX77349.1 |
| SEG:seg | SUPFAM:SSF51011 | SUPFAM:SSF51445 | SUPFAM:SSF52540 | UniParc:UPI0004EEC513 | MapMan:3.2.2.6 |
| MapMan:3.2.3.3.2.1 | : | : | : | : | : |
Description
BnaC08g03940D
Coordinates
chrLK031810:-:1922341..1926004
Molecular Weight (calculated)
44219.5 Da
IEP (calculated)
8.839
GRAVY (calculated)
-0.466
Length
390 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPRNLNQKK GLCNGTRLIV TYLGERVIQG EIVTGSHIGH KVFLPRIILS ESVTKHPFTL ERRQFPIRQC YAMTINKSQG QSLKGVVLYL PQPIFTHGQL
101: YVGLSRVTTK AEWNGMYRDD VRRFIKGDCG MKGSFATRVS GSSDLYQVNQ RKPYHGVNFI IAHDGFTLRD LVTYNSKHNE ANGEGGNDGC NDNYSWNCGS
201: EGETGDAHIK SLRVRQMKNF HLALMISQGT PMMLMGDEYG HTRYGNNNSY GHDTALNNFQ WKEASLNISR HFRFFSELIK FRHSHHVLKH ENFLSKGEIT
301: WHEDNWDNSE SKFLAFTLHD GVSGQDVYAA FNAHDYFVKA LIPLPPSGKQ WFRVADTNLE SPDDFIKEGV AGVAEAYNVA PFSSILLKSM
101: YVGLSRVTTK AEWNGMYRDD VRRFIKGDCG MKGSFATRVS GSSDLYQVNQ RKPYHGVNFI IAHDGFTLRD LVTYNSKHNE ANGEGGNDGC NDNYSWNCGS
201: EGETGDAHIK SLRVRQMKNF HLALMISQGT PMMLMGDEYG HTRYGNNNSY GHDTALNNFQ WKEASLNISR HFRFFSELIK FRHSHHVLKH ENFLSKGEIT
301: WHEDNWDNSE SKFLAFTLHD GVSGQDVYAA FNAHDYFVKA LIPLPPSGKQ WFRVADTNLE SPDDFIKEGV AGVAEAYNVA PFSSILLKSM
001: MLTSPSSSST YDPFSSNFSP SLTNAFSSSF TIPMGLKLSR RVTRARIFSR KIKDRSTLKV TCRRAHERVV EEEASTMTET KLFKVSSGEV SPLGVSQVDK
101: GINFALFSQN ATSVTLCLSL SQSGKDDTDD DGMIELVLDP SVNKTGDTWH ICVEDLPLNN VLYGYRVDGP GEWQQGHRFD RSILLLDPYA KLVKGHSSFG
201: DSSQKFAQFY GTYDFESSPF DWGDDYKFPN IPEKDLVIYE MNVRAFTADE SSGMDPAIGG SYLGFIEKIP HLQDLGINAV ELLPVFEFDE LELQRRSNPR
301: DHMVNTWGYS TVNFFAPMSR YASGEGDPIK ASKEFKEMVK ALHSAGIEVI LDVVYNHTNE ADDKYPYTTS FRGIDNKVYY MLDPNNQLLN FSGCGNTLNC
401: NHPVVMELIL DSLRHWVTEY HVDGFRFDLA SVLCRATDGS PLSAPPLIRA IAKDSVLSRC KIIAEPWDCG GLYLVGKFPN WDRWAEWNGM YRDDVRRFIK
501: GDSGMKGSFA TRVSGSSDLY QVNQRKPYHG VNFVIAHDGF TLRDLVSYNF KHNEANGEGG NDGCNDNHSW NCGFEGETGD AHIKSLRTRQ MKNFHLALMI
601: SQGTPMMLMG DEYGHTRYGN NNSYGHDTSL NNFQWKELDA KKQNHFRFFS EVIKFRHSHH VLKHENFLTQ GEITWHEDNW DNSESKFLAF TLHDGIGGRD
701: IYVAFNAHDY FVKALIPQPP PGKQWFRVAD TNLESPDDFV REGVAGVADT YNVAPFSSIL LQSK
101: GINFALFSQN ATSVTLCLSL SQSGKDDTDD DGMIELVLDP SVNKTGDTWH ICVEDLPLNN VLYGYRVDGP GEWQQGHRFD RSILLLDPYA KLVKGHSSFG
201: DSSQKFAQFY GTYDFESSPF DWGDDYKFPN IPEKDLVIYE MNVRAFTADE SSGMDPAIGG SYLGFIEKIP HLQDLGINAV ELLPVFEFDE LELQRRSNPR
301: DHMVNTWGYS TVNFFAPMSR YASGEGDPIK ASKEFKEMVK ALHSAGIEVI LDVVYNHTNE ADDKYPYTTS FRGIDNKVYY MLDPNNQLLN FSGCGNTLNC
401: NHPVVMELIL DSLRHWVTEY HVDGFRFDLA SVLCRATDGS PLSAPPLIRA IAKDSVLSRC KIIAEPWDCG GLYLVGKFPN WDRWAEWNGM YRDDVRRFIK
501: GDSGMKGSFA TRVSGSSDLY QVNQRKPYHG VNFVIAHDGF TLRDLVSYNF KHNEANGEGG NDGCNDNHSW NCGFEGETGD AHIKSLRTRQ MKNFHLALMI
601: SQGTPMMLMG DEYGHTRYGN NNSYGHDTSL NNFQWKELDA KKQNHFRFFS EVIKFRHSHH VLKHENFLTQ GEITWHEDNW DNSESKFLAF TLHDGIGGRD
701: IYVAFNAHDY FVKALIPQPP PGKQWFRVAD TNLESPDDFV REGVAGVADT YNVAPFSSIL LQSK
Arabidopsis Description
ISA3Isoamylase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M0S5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.