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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • plasma membrane 1
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX70233 Canola plastid 93.81 94.5
AT5G04360.2 Thale cress plastid 82.89 83.32
Solyc11g008050.1.1 Tomato cytosol 32.06 68.05
Os04t0164900-01 Rice cytosol, nucleus, plastid 38.25 66.85
KRH34652 Soybean plastid 64.12 65.4
VIT_13s0019g05160.t01 Wine grape plastid 64.43 65.38
HORVU7Hr1G027860.4 Barley cytosol, vacuole 55.98 59.6
KXG25811 Sorghum plastid 57.63 57.99
TraesCS7B01G034600.1 Wheat plastid 56.49 57.38
TraesCS7D01G133100.1 Wheat golgi 56.39 56.8
TraesCS7A01G133500.2 Wheat golgi 56.39 56.8
CDY47998 Canola cytosol 36.8 54.92
Zm00001d004438_P005 Maize plastid 53.61 53.66
CDY70211 Canola plastid 9.69 17.03
CDX90708 Canola plastid 11.75 15.16
CDX77333 Canola cytosol 1.44 13.33
CDX74820 Canola plastid 10.52 12.96
CDY20500 Canola plastid 10.41 12.88
CDY60217 Canola extracellular 2.27 12.79
CDY15458 Canola cytosol 8.76 11.6
CDX89902 Canola plastid 9.59 11.05
CDY18165 Canola plastid 9.28 11.0
CDY05042 Canola cytosol 3.09 10.91
CDX77349 Canola mitochondrion 4.23 10.51
CDX86680 Canola plastid 8.97 10.51
Protein Annotations
Gene3D:2.60.40.10Gene3D:2.60.40.1130Gene3D:2.60.40.1180MapMan:3.2.3.3.2.2Gene3D:3.20.20.80GO:A0A078IMV5
UniProt:A0A078IMV5EnsemblPlants:CDY51316ProteinID:CDY51316ProteinID:CDY51316.1GO:GO:0003674GO:GO:0003824
GO:GO:0004553GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016787GO:GO:0051060
EnsemblPlantsGene:GSBRNA2T00003133001InterPro:Glyco_hydro_13_NInterPro:Glyco_hydro_bInterPro:Glycoside_hydrolase_SFInterPro:IPR013780InterPro:IPR013783
InterPro:Ig-like_foldInterPro:Ig_E-setPFAM:PF02922PFAM:PF11852PANTHER:PTHR43631InterPro:Pullul_strch
InterPro:Pullul_strch_CSUPFAM:SSF51011SUPFAM:SSF51445SUPFAM:SSF81296SignalP:SignalP-noTMTIGRFAMs:TIGR02103
UniParc:UPI0004EE3A37SEG:seg::::
Description
BnaCnng20610DBnaCnng20610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IMV5]
Coordinates
chrLK032984:+:66810..73423
Molecular Weight (calculated)
107516.0 Da
IEP (calculated)
5.941
GRAVY (calculated)
-0.279
Length
970 amino acids
Sequence
(BLAST)
001: MALTLLTLTT SVHLLDSTSV ALPRIFAAAF PLRSRFRRPS SSISSFQLGF PSTTHRSDSI RCLCASSSSA ASPMQFEVST PNSQFLDSLL YSRAYWVTEG
101: VIAWNVDVGE GSCYLYASRV AGLSFSEDGI DGFDFRVKLE AESGSLRTNV VEKFPHIGNY KPFKVPSDLD VRDLVKSQLA IVCFDAEGRL IEGTGLQLPG
201: VLDELFSYDG PLGANFTPGG GVSLHLWAPT AQEVTVCIYK NPLDKSPMEI CPLEEVNGVW STNGPSSWEG CYYVYKVSVY HPSTLKVETC YANDPYARGL
301: SADASKTYLL NLDSDDLKPE GWEKLADKKP DLRSYSDISI YELHVRDFSV SDETVEPEHR GGYLAFTLKD SAGVKHLQKL ADAGLTHLHL LPTYQFGDVD
401: DEKENWKYID TSLLEGLPPD SAEAQARVTE IQNDDGFNWG YNPVLWGVPK GSYASDPTGP CRIIEFRKMV QALNRIGLNV VLDVVYNHLH ANGPHNKDSV
501: LDKIVPGYYL RRNNDGFIEN STCVNNTASE HYMVDRLIRD DLLNWVVNYK VDGFRFDLMG HIMKDTMVKA KSAIGNLRKE TDGVDGSRIY IYGEGWNFGE
601: VANNGRGVNA SQFNLTGTGI GSFNDRIRDA TLGGSPFGHP LQQGFITGLL LQPNGHDHGS EATQQLMLST AKDHIQIGMA ANLKDYVLTN HEGKEVKGSE
701: ILMHDATPVA YASQPTETIN YVSAHDNETL FDIISLKTPM EISVDERCRI NHLASSMIAL SQGIPFFHAG DEILRSKSLD RDSYNSGDWF NRLDFSYKSN
801: NWGVGLPPKG KNEHSWPLIK LRLQDPSFKP QSSHIVSTLN SFLDLLRIRY SSPLFRLDTA KAIKERVRFH NTGPSSVPGA IIMSIEDGHK GMASVSQIDP
901: VYSFLVVIFN ARPSEFSFLS PALKDRNLEL HPVQVKSGDE IVRKSVYDAF SGGFTVPART TTVFVEVRKG
Best Arabidopsis Sequence Match ( AT5G04360.1 )
(BLAST)
001: MALTLTPTSS VHLLSSISVA RPRIFAADFN LRSRWRRRRP VTSISNFRLR LPSKTSLHCL CSSSSASSPM SLEVSSPNSQ FLDCLIYSRA YWVTQGVIAW
101: NVDVGEGSCY FYASKSAGLS FSEDGIDGYD LRIKLEAESG SLPADVIEKF PHIRNYKSFK VPKDLDIRDL VKSQLAVVCF DAEGRLIQGT GLQLPGVLDE
201: LFSYDGPLGA HFTPEGVSLH LWAPTAQAVS VCIYKNPLDK SPMEICPLKE ANGVWSTEGA CSWGGCYYVY KVSVYHPSTM KLETCYANDP YARGLSADGR
301: KTFLVNLDSD DLKPEGWDNL ADKKPCLRSF SDISIYELHV RDFSANDETV EPENRGGYLA FTSKDSAGVK HLQKLVDAGL THLHLLPTFQ FGDVDDEKEN
401: WKSVDTSLLE GLRPDSTEAQ ARITEIQNDD GYNWGYNPVL WGVPKGSYAS DPTGPCRIIE FRKMVQALNC TGLNVVLDVV YNHLHASGPH DKESVLDKIV
501: PGYYLRRNSD GFIENSTCVN NTASEHYMVD RLIRDDLLNW VVNYKVDGFR FDLMGHIMKA TIVNAKSAIG SLRKETDGVD GSRIYLYGEG WNFGEVAENG
601: RGINASQFNL GGTGIGSFND RIRDATLGGS PFGHPLQQGF ITGLLLQPNA HDHGSEATQE LMLSTAKNHI QTGMAANLKD YMLTNHEGKE VKGSEVLMHD
701: ATPVAYASLP TETINYVSAH DNETLFDIIS LKTPMEISVD ERCRINHLAS SMIALSQGIP FFHAGDEILR SKSLDRDSYN SGDWFNRLDF SYSSNNWGVG
801: LPPKGKNEHN WPLIKPRLQD PSFKPKSSHI VATLHNFLDL LRIRYSSPLF RLDTARAIQE RVRFHNTGPS SIPGAIVMSI EDGHRGIPSV SQIDPIYSLI
901: VVIFNARPSE FSYPSPALKD RKLELHPVQV MSADEIVKKS VYDSFSGGFT VPARTTTVFV ESRNG
Arabidopsis Description
PU1Pullulanase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8GTR4]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.