Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 1
- cytosol 2
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os04t0164900-01 | Rice | cytosol, nucleus, plastid | 47.7 | 39.28 |
| VIT_13s0019g05160.t01 | Wine grape | plastid | 73.74 | 35.25 |
| KRH34652 | Soybean | plastid | 70.68 | 33.96 |
| AT5G04360.2 | Thale cress | plastid | 68.93 | 32.64 |
| CDX70233 | Canola | plastid | 67.83 | 32.19 |
| CDY51316 | Canola | plastid | 68.05 | 32.06 |
| HORVU7Hr1G027860.4 | Barley | cytosol, vacuole | 60.61 | 30.41 |
| KXG25811 | Sorghum | plastid | 61.93 | 29.36 |
| TraesCS7B01G034600.1 | Wheat | plastid | 59.96 | 28.69 |
| TraesCS7A01G133500.2 | Wheat | golgi | 60.39 | 28.66 |
| TraesCS7D01G133100.1 | Wheat | golgi | 59.96 | 28.45 |
| Zm00001d004438_P005 | Maize | plastid | 54.49 | 25.7 |
| Bra009461.1-P | Field mustard | plastid | 67.83 | 23.24 |
| CDY47998 | Canola | cytosol | 23.41 | 16.46 |
| Bra040385.1-P | Field mustard | cytosol, plasma membrane, plastid | 24.95 | 15.2 |
| Solyc06g009220.2.1 | Tomato | plastid | 19.26 | 11.91 |
| Solyc07g014590.2.1 | Tomato | extracellular | 17.07 | 9.91 |
| Solyc11g008060.1.1 | Tomato | plastid | 5.91 | 8.82 |
| Solyc09g064800.1.1 | Tomato | plastid | 14.0 | 7.39 |
| Solyc11g008040.1.1 | Tomato | mitochondrion | 0.88 | 3.28 |
Protein Annotations
| EnsemblPlants:Solyc11g008050.1.1 | EnsemblPlantsGene:Solyc11g008050.1 | Gene3D:3.20.20.80 | InterPro:Glycoside_hydrolase_SF | PANTHER:PTHR43631 | SUPFAM:SSF51445 |
| UniParc:UPI000276A72B | UniProt:K4D566 | MapMan:3.2.3.3.2.2 | : | : | : |
Description
No Description!
Coordinates
chr11:-:2256207..2264573
Molecular Weight (calculated)
50960.0 Da
IEP (calculated)
5.539
GRAVY (calculated)
-0.353
Length
457 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSLSADGKR TLLVNLDSDD VKPEGWDNLQ DEKPNLLSFS DVSIYELHVR DFSANDPTVP HEFQGGYLAF TSQDSAGVQH LKRLSNAGIT HVHLLPTYQF
101: AGVEDEKHKW KYTDIEKLNS FPPDSEEQQA LITAIQDEDG YNWGYNPVLW GVPKGSYASN ANGPCRIVEF RKMVQALNRI GLRVVLDVVY NHLHASGPFS
201: DFSVLDKIVP GYFLRRNADG GIENSTCVNN TASEHFMVER LILDDLKCWA VHYKIDGFRF DLMGHIMKRT MLKAKSFLNS LSTEENGVDG SSIYIYGEGW
301: DFGEVAKNGR GINASQFNLF GAGIGSFNDR IRDALLGGSP FGHPLHQGFV TGLYSEPNGH DLGDKANVER MLTVSKDHIQ VGMAANLKDF VLTNCDGQEV
401: KGSEVLMHDR KPVGYASSPV ETVNYVSAHD NETLFDIISL KVICKLQRTF LWRRDAG
101: AGVEDEKHKW KYTDIEKLNS FPPDSEEQQA LITAIQDEDG YNWGYNPVLW GVPKGSYASN ANGPCRIVEF RKMVQALNRI GLRVVLDVVY NHLHASGPFS
201: DFSVLDKIVP GYFLRRNADG GIENSTCVNN TASEHFMVER LILDDLKCWA VHYKIDGFRF DLMGHIMKRT MLKAKSFLNS LSTEENGVDG SSIYIYGEGW
301: DFGEVAKNGR GINASQFNLF GAGIGSFNDR IRDALLGGSP FGHPLHQGFV TGLYSEPNGH DLGDKANVER MLTVSKDHIQ VGMAANLKDF VLTNCDGQEV
401: KGSEVLMHDR KPVGYASSPV ETVNYVSAHD NETLFDIISL KVICKLQRTF LWRRDAG
001: MALTLTPTSS VHLLSSISVA RPRIFAADFN LRSRWRRRRP VTSISNFRLR LPSKTSLHCL CSSSSASSPM SLEVSSPNSQ FLDCLIYSRA YWVTQGVIAW
101: NVDVGEGSCY FYASKSAGLS FSEDGIDGYD LRIKLEAESG SLPADVIEKF PHIRNYKSFK VPKDLDIRDL VKSQLAVVCF DAEGRLIQGT GLQLPGVLDE
201: LFSYDGPLGA HFTPEGVSLH LWAPTAQAVS VCIYKNPLDK SPMEICPLKE ANGVWSTEGA CSWGGCYYVY KVSVYHPSTM KLETCYANDP YARGLSADGR
301: KTFLVNLDSD DLKPEGWDNL ADKKPCLRSF SDISIYELHV RDFSANDETV EPENRGGYLA FTSKDSAGVK HLQKLVDAGL THLHLLPTFQ FGDVDDEKEN
401: WKSVDTSLLE GLRPDSTEAQ ARITEIQNDD GYNWGYNPVL WGVPKGSYAS DPTGPCRIIE FRKMVQALNC TGLNVVLDVV YNHLHASGPH DKESVLDKIV
501: PGYYLRRNSD GFIENSTCVN NTASEHYMVD RLIRDDLLNW VVNYKVDGFR FDLMGHIMKA TIVNAKSAIG SLRKETDGVD GSRIYLYGEG WNFGEVAENG
601: RGINASQFNL GGTGIGSFND RIRDATLGGS PFGHPLQQGF ITGLLLQPNA HDHGSEATQE LMLSTAKNHI QTGMAANLKD YMLTNHEGKE VKGSEVLMHD
701: ATPVAYASLP TETINYVSAH DNETLFDIIS LKTPMEISVD ERCRINHLAS SMIALSQGIP FFHAGDEILR SKSLDRDSYN SGDWFNRLDF SYSSNNWGVG
801: LPPKGKNEHN WPLIKPRLQD PSFKPKSSHI VATLHNFLDL LRIRYSSPLF RLDTARAIQE RVRFHNTGPS SIPGAIVMSI EDGHRGIPSV SQIDPIYSLI
901: VVIFNARPSE FSYPSPALKD RKLELHPVQV MSADEIVKKS VYDSFSGGFT VPARTTTVFV ESRNG
101: NVDVGEGSCY FYASKSAGLS FSEDGIDGYD LRIKLEAESG SLPADVIEKF PHIRNYKSFK VPKDLDIRDL VKSQLAVVCF DAEGRLIQGT GLQLPGVLDE
201: LFSYDGPLGA HFTPEGVSLH LWAPTAQAVS VCIYKNPLDK SPMEICPLKE ANGVWSTEGA CSWGGCYYVY KVSVYHPSTM KLETCYANDP YARGLSADGR
301: KTFLVNLDSD DLKPEGWDNL ADKKPCLRSF SDISIYELHV RDFSANDETV EPENRGGYLA FTSKDSAGVK HLQKLVDAGL THLHLLPTFQ FGDVDDEKEN
401: WKSVDTSLLE GLRPDSTEAQ ARITEIQNDD GYNWGYNPVL WGVPKGSYAS DPTGPCRIIE FRKMVQALNC TGLNVVLDVV YNHLHASGPH DKESVLDKIV
501: PGYYLRRNSD GFIENSTCVN NTASEHYMVD RLIRDDLLNW VVNYKVDGFR FDLMGHIMKA TIVNAKSAIG SLRKETDGVD GSRIYLYGEG WNFGEVAENG
601: RGINASQFNL GGTGIGSFND RIRDATLGGS PFGHPLQQGF ITGLLLQPNA HDHGSEATQE LMLSTAKNHI QTGMAANLKD YMLTNHEGKE VKGSEVLMHD
701: ATPVAYASLP TETINYVSAH DNETLFDIIS LKTPMEISVD ERCRINHLAS SMIALSQGIP FFHAGDEILR SKSLDRDSYN SGDWFNRLDF SYSSNNWGVG
801: LPPKGKNEHN WPLIKPRLQD PSFKPKSSHI VATLHNFLDL LRIRYSSPLF RLDTARAIQE RVRFHNTGPS SIPGAIVMSI EDGHRGIPSV SQIDPIYSLI
901: VVIFNARPSE FSYPSPALKD RKLELHPVQV MSADEIVKKS VYDSFSGGFT VPARTTTVFV ESRNG
Arabidopsis Description
PU1Pullulanase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8GTR4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.