CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0019g05160.t01	Wine grape	plastid	71.61	71.23
Solyc11g008050.1.1	Tomato	cytosol	33.96	70.68
Os04t0164900-01	Rice	cytosol, nucleus, plastid	40.59	69.55
AT5G04360.2	Thale cress	plastid	65.83	64.87
CDX70233	Canola	plastid	65.51	64.69
CDY51316	Canola	plastid	65.4	64.12
HORVU7Hr1G027860.4	Barley	cytosol, vacuole	57.52	60.04
KXG25811	Sorghum	plastid	60.04	59.23
TraesCS7B01G034600.1	Wheat	plastid	58.04	57.8
TraesCS7D01G133100.1	Wheat	golgi	58.25	57.53
TraesCS7A01G133500.2	Wheat	golgi	57.52	56.8
Zm00001d004438_P005	Maize	plastid	56.26	55.21
Bra009461.1-P	Field mustard	plastid	64.46	45.95
CDY47998	Canola	cytosol	29.76	43.54
Bra040385.1-P	Field mustard	cytosol, plasma membrane, plastid	30.6	38.8
KRH62892	Soybean	mitochondrion	1.47	15.91
KRH62296	Soybean	plastid	12.09	14.69
KRH53006	Soybean	plastid	11.88	14.64
KRH41413	Soybean	plastid	10.41	12.41
KRG95479	Soybean	mitochondrion	10.62	11.68
KRH67160	Soybean	plastid	10.62	11.66

Protein Annotations

EntrezGene:100780405	Gene3D:2.60.40.10	Gene3D:2.60.40.1130	Gene3D:2.60.40.1180	MapMan:3.2.3.3.2.2	Gene3D:3.20.20.80
EMBL:ACUP02006610	EnsemblPlantsGene:GLYMA_10G197000	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0005983	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987
GO:GO:0010303	GO:GO:0016787	GO:GO:0019252	GO:GO:0051060	InterPro:Glyco_hydro_13_N	InterPro:Glyco_hydro_b
InterPro:Glycoside_hydrolase_SF	UniProt:I1LCL8	InterPro:IPR013780	InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:Ig_E-set
EnsemblPlants:KRH34652	ProteinID:KRH34652	ProteinID:KRH34652.1	PFAM:PF02922	PFAM:PF11852	PANTHER:PTHR43631
InterPro:Pullul_strch	InterPro:Pullul_strch_C	SUPFAM:SSF51011	SUPFAM:SSF51445	SUPFAM:SSF81296	TIGRFAMs:TIGR02103
UniParc:UPI000233D511	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:42826875..42843526

Molecular Weight (calculated)

105655.0 Da

IEP (calculated)

6.322

GRAVY (calculated)

-0.214

Length

951 amino acids

Sequence
(BLAST)

001: MHLLASSSSL SPSLPSSFPR PSLHLHLHFP SQTTQLRLHT PPPLSCSLNS SSSSSYVEQS ASSSQMQNGL LYSRAYWVAE SLIAWDVDVG NGFSCYLLAS
101: KNASLTIANC QIQGEDLKIK LQEDRVGLPA NVVEKFPHIR GHKVFSLPPT LDVKPLLKFR LAVVICDSDG ECMNCTGLQL PGVLDDLFSY SGPLGALFSE
201: EAVSLYLWAP TAQAVHAYIY KDPSGDDPIE IVCLEEENGV WRTKGPKSWE GCYYVYEVCV YHPSTMRIEK CYTSDPYARG LSSDGRRSFL LNLDSVKLKP
301: DGWDNLANKK PTIHSFSDIS IYEMHIRDFS ASDLSVQPEF RGGYLAFTLQ DSAGVLHLKK LSSAGITHVH LLPTFQFAGV DDQKEDWRFV DTSILESLPP
401: DSDQQQALIT AIQNFDGYNW GYNPVLWGVP KGSYASNPNG PYRTIEFRKM VMALNHIGLR VVLDVVYNHL QGSGPFDEHS VLDKIVPGYY LRRNSDGLIE
501: HSTCINNTAS EHFMVERLIL DDLVHWAVNY KIDGFRFDLM GHIMKSTMVK AKTALQCLTK EKDGLDGSSI YIYGEGWDFG EVAKNGRGVN ASQFNLPGTQ
601: IGSFNDRIRD AILGGSPFGH PLQQGFVTGL LLQPNGHDHG TEANAKSMLA ASMDHIQIGM AANLKDFVLT NSEGEEVKGS EILTYGGTPV AYASCPIETI
701: NYVSAHDNET LFDIVSLKTP MDISVSERCR INHLATSIIA LSQGIPFFHS GDEILRSKSL DRDSYNSGDW FNRLDFTYNS NNWGVGLPPQ EKNEKNWPLI
801: KPRLANPSFR PQKTDILATV DNFLNLLRIR YSSPLFRLKT ANTIQERVRF HNTGPSWVCG VIVMSIEDGH NGFPGLSQLD PIYSFIVVVF NASPKEVSFV
901: SPALQLRNLQ LHPIQVSSSD DLVKSSRYEA SSGCFVVPRR TTAVFVEPRK T

Best Arabidopsis Sequence Match ( AT5G04360.1 )
(BLAST)

001: MALTLTPTSS VHLLSSISVA RPRIFAADFN LRSRWRRRRP VTSISNFRLR LPSKTSLHCL CSSSSASSPM SLEVSSPNSQ FLDCLIYSRA YWVTQGVIAW
101: NVDVGEGSCY FYASKSAGLS FSEDGIDGYD LRIKLEAESG SLPADVIEKF PHIRNYKSFK VPKDLDIRDL VKSQLAVVCF DAEGRLIQGT GLQLPGVLDE
201: LFSYDGPLGA HFTPEGVSLH LWAPTAQAVS VCIYKNPLDK SPMEICPLKE ANGVWSTEGA CSWGGCYYVY KVSVYHPSTM KLETCYANDP YARGLSADGR
301: KTFLVNLDSD DLKPEGWDNL ADKKPCLRSF SDISIYELHV RDFSANDETV EPENRGGYLA FTSKDSAGVK HLQKLVDAGL THLHLLPTFQ FGDVDDEKEN
401: WKSVDTSLLE GLRPDSTEAQ ARITEIQNDD GYNWGYNPVL WGVPKGSYAS DPTGPCRIIE FRKMVQALNC TGLNVVLDVV YNHLHASGPH DKESVLDKIV
501: PGYYLRRNSD GFIENSTCVN NTASEHYMVD RLIRDDLLNW VVNYKVDGFR FDLMGHIMKA TIVNAKSAIG SLRKETDGVD GSRIYLYGEG WNFGEVAENG
601: RGINASQFNL GGTGIGSFND RIRDATLGGS PFGHPLQQGF ITGLLLQPNA HDHGSEATQE LMLSTAKNHI QTGMAANLKD YMLTNHEGKE VKGSEVLMHD
701: ATPVAYASLP TETINYVSAH DNETLFDIIS LKTPMEISVD ERCRINHLAS SMIALSQGIP FFHAGDEILR SKSLDRDSYN SGDWFNRLDF SYSSNNWGVG
801: LPPKGKNEHN WPLIKPRLQD PSFKPKSSHI VATLHNFLDL LRIRYSSPLF RLDTARAIQE RVRFHNTGPS SIPGAIVMSI EDGHRGIPSV SQIDPIYSLI
901: VVIFNARPSE FSYPSPALKD RKLELHPVQV MSADEIVKKS VYDSFSGGFT VPARTTTVFV ESRNG

Arabidopsis Description

PU1Pullulanase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8GTR4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.