Factsheet for TraesCS7B01G034600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 4
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G133100.1	Wheat	golgi	97.7	96.88
TraesCS7A01G133500.2	Wheat	golgi	97.59	96.78
HORVU7Hr1G027860.4	Barley	cytosol, vacuole	90.26	94.62
Os04t0164900-01	Rice	cytosol, nucleus, plastid	48.8	83.96
KXG25811	Sorghum	plastid	77.8	77.07
Zm00001d004438_P005	Maize	plastid	72.25	71.21
Solyc11g008050.1.1	Tomato	cytosol	28.69	59.96
VIT_13s0019g05160.t01	Wine grape	plastid	58.12	58.05
KRH34652	Soybean	plastid	57.8	58.04
AT5G04360.2	Thale cress	plastid	57.28	56.68
CDY51316	Canola	plastid	57.38	56.49
CDX70233	Canola	plastid	56.86	56.39
Bra009461.1-P	Field mustard	plastid	56.13	40.18
CDY47998	Canola	cytosol	26.07	38.31
Bra040385.1-P	Field mustard	cytosol, plasma membrane, plastid	27.12	34.53
TraesCS5B01G246400.1	Wheat	plastid	11.41	14.05
TraesCS1B01G257700.1	Wheat	mitochondrion, plastid	10.37	12.56
TraesCS7B01G139700.2	Wheat	plastid	10.26	12.41

Protein Annotations

Gene3D:2.60.40.10	Gene3D:2.60.40.1130	Gene3D:2.60.40.1180	MapMan:3.2.3.3.2.2	Gene3D:3.20.20.80	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0051060	InterPro:Glyco_hydro_13_N	InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780	InterPro:IPR013783
InterPro:Ig-like_fold	InterPro:Ig_E-set	PFAM:PF02922	PFAM:PF11852	PANTHER:PTHR43631	InterPro:Pullul_strch
InterPro:Pullul_strch_C	SUPFAM:SSF51011	SUPFAM:SSF51445	SUPFAM:SSF81296	TIGRFAMs:TIGR02103	EnsemblPlantsGene:TraesCS7B01G034600
EnsemblPlants:TraesCS7B01G034600.1	TIGR:cd02860	TIGR:cd11341	SEG:seg	:	:

Description

No Description!

Coordinates

chr7B:-:33906341..33915598

Molecular Weight (calculated)

104973.0 Da

IEP (calculated)

5.504

GRAVY (calculated)

-0.263

Length

955 amino acids

Sequence
(BLAST)

001: MRTMLLRHLS PASALPNPRP SSASSPQRIP ARARPPPLHS ARATALRARR TPMAAGETGA SVSVSAAEAT QEFMPDARAY WVTSDLIAWN VGEQEAASVC
101: LYASRAAAIG LSPSNGGIQG YDSKVELQPE SAGLPETVTQ KFPFISSYRA FRVPSSVDVA SLVKYQLVVA SFGADGKHVD VTGLQLPGVL DDIFAYTGPL
201: GAVFSEESVS LHLWAPTAQD VSVCFFDGPA GPALETVQLE ESNGVWSVTG PREWENRYYL YEVDVYHPTK AQVLKCLAAD PYARGLSANG ARTWLVDINN
301: ETLKPASWDE LADEKPKLDS FSDITIYELH IRDFSAHDGT VDSDSRGGFR AFAYQASAGM QHLRKLADAG LTHVHLLPSF HFAGVDDIKS NWKFVDECEL
401: ATFPPGSDRQ QAAVVAIQEE DPYNWGYNPV LWGVPKGSYA SDPDGPSRII EYRQMVQALN RIGLRVVMDV VYNHLDSSGP CGISSVLDKI VPGYYVRRDT
501: NGQIENSAAM NNTASEHFMV DRLIVDDLLN WAVNYKIDGF RFDLMGHIMK HTMMRAKSAL QSLTRDAHGV DGSKIYLYGE GWDFAEVARN QRGINGSQLN
601: MSGTGIGSFN DRIRDAVNGG NPFGNPLQQG FNTGLFLEPN GFYQGNEADT RRSLATYADQ IQIGLAGNLR DYVLITHTGE AKKGSEIHTF DGLPVGYTSS
701: PIEIINYVSA HDNETLFDVI SVKTPMNLSV DERCRINHLA SSMMALSQGI PFFHAGDEIL RSKSIDRDSY NSGDWFNKLD FTYETNNWGV GLPPSEKNED
801: NWPLMKPRLE NPSFKPAKGH ILAALDSFVD ILKIRYSSPL FRLSTASDIK QRVHFHNTGP SSVPGVIVMG IEDARDERPE MAQLDANFSY VVTVFNVCPH
901: EVSMDIPALA SMRLELHPVQ VNSSDALVGK SVYEAATGRF TVPRRTVSVF VEPRC

Best Arabidopsis Sequence Match ( AT5G04360.1 )
(BLAST)

001: MALTLTPTSS VHLLSSISVA RPRIFAADFN LRSRWRRRRP VTSISNFRLR LPSKTSLHCL CSSSSASSPM SLEVSSPNSQ FLDCLIYSRA YWVTQGVIAW
101: NVDVGEGSCY FYASKSAGLS FSEDGIDGYD LRIKLEAESG SLPADVIEKF PHIRNYKSFK VPKDLDIRDL VKSQLAVVCF DAEGRLIQGT GLQLPGVLDE
201: LFSYDGPLGA HFTPEGVSLH LWAPTAQAVS VCIYKNPLDK SPMEICPLKE ANGVWSTEGA CSWGGCYYVY KVSVYHPSTM KLETCYANDP YARGLSADGR
301: KTFLVNLDSD DLKPEGWDNL ADKKPCLRSF SDISIYELHV RDFSANDETV EPENRGGYLA FTSKDSAGVK HLQKLVDAGL THLHLLPTFQ FGDVDDEKEN
401: WKSVDTSLLE GLRPDSTEAQ ARITEIQNDD GYNWGYNPVL WGVPKGSYAS DPTGPCRIIE FRKMVQALNC TGLNVVLDVV YNHLHASGPH DKESVLDKIV
501: PGYYLRRNSD GFIENSTCVN NTASEHYMVD RLIRDDLLNW VVNYKVDGFR FDLMGHIMKA TIVNAKSAIG SLRKETDGVD GSRIYLYGEG WNFGEVAENG
601: RGINASQFNL GGTGIGSFND RIRDATLGGS PFGHPLQQGF ITGLLLQPNA HDHGSEATQE LMLSTAKNHI QTGMAANLKD YMLTNHEGKE VKGSEVLMHD
701: ATPVAYASLP TETINYVSAH DNETLFDIIS LKTPMEISVD ERCRINHLAS SMIALSQGIP FFHAGDEILR SKSLDRDSYN SGDWFNRLDF SYSSNNWGVG
801: LPPKGKNEHN WPLIKPRLQD PSFKPKSSHI VATLHNFLDL LRIRYSSPLF RLDTARAIQE RVRFHNTGPS SIPGAIVMSI EDGHRGIPSV SQIDPIYSLI
901: VVIFNARPSE FSYPSPALKD RKLELHPVQV MSADEIVKKS VYDSFSGGFT VPARTTTVFV ESRNG

Arabidopsis Description

PU1Pullulanase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8GTR4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.