Factsheet for Zm00001d005949_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, vacuole, cytosol

Predictor Summary:

vacuole 1
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, vacuole
Any Predictor:	cytosol, mitochondrion, vacuole
MultiLoc:	vacuole
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os09t0469400-01	Rice	plastid	75.63	62.24
KXG35819	Sorghum	plastid	83.87	30.15
Zm00001d020799_P003	Maize	mitochondrion	82.8	28.8
TraesCS5D01G255800.1	Wheat	plastid	76.7	27.58
TraesCS5B01G246400.1	Wheat	plastid	75.63	27.19
HORVU5Hr1G070160.1	Barley	plastid	74.91	26.93
TraesCS5A01G248700.1	Wheat	plastid	74.19	26.71
Zm00001d049753_P001	Maize	mitochondrion, plastid	36.2	12.11
Zm00001d050508_P001	Maize	cytosol	3.23	11.39
Zm00001d038121_P001	Maize	plastid	34.77	11.04
Zm00001d004438_P005	Maize	plastid	18.28	5.26
Zm00001d016045_P001	Maize	plastid	5.73	4.34
Zm00001d024985_P004	Maize	plastid	2.51	3.11
Zm00001d052844_P001	Maize	cytosol	1.79	2.92
Zm00001d050532_P001	Maize	extracellular	3.23	2.22
Zm00001d005948_P001	Maize	golgi, plasma membrane, plastid	1.79	1.2

Protein Annotations

Gene3D:2.60.40.10	MapMan:3.2.2.6	MapMan:3.2.3.3.2.1	Gene3D:3.20.20.80	UniProt:A0A1D6ERN6	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:Glyco_hydro_13_N	InterPro:Glyco_hydro_13_cat_dom	InterPro:Glycoside_hydrolase_SF	InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:Ig_E-set
ProteinID:ONM22400.1	PFAM:PF00128	PFAM:PF02922	PANTHER:PTHR43002	SUPFAM:SSF51445	SUPFAM:SSF81296
UniParc:UPI00084394DE	EnsemblPlantsGene:Zm00001d005949	EnsemblPlants:Zm00001d005949_P001	EnsemblPlants:Zm00001d005949_T001	:	:

Description

Isoamylase 3 chloroplastic

Coordinates

chr2:-:193582548..193587675

Molecular Weight (calculated)

31028.5 Da

IEP (calculated)

4.608

GRAVY (calculated)

-0.187

Length

279 amino acids

Sequence
(BLAST)

001: MGHTSSGNEV PLKYSSGKAF PLGVSQVDDG LNFAIFSQHA SSVTLCLKLP ERGTQDDADI IEFALDRQKN KTGDIWHVSV ELFGTYDFDS SPFDWGDNYK
101: LPNLPETDLV IYEMNVRAFT ADESSKLGPA IRGSYLGVID KIPHLLELGV NAVELLPVFE FDELEFKRFP NPRDHMVNTW GYSTINFFAP MSRYASAGGG
201: PVAASKEFKQ MVKAFHNAGI EVILDVVYNH TNEADDANPY MTSFRGLDNK VYYILDLNNS AQLLNFSGCG KTMVLSFSF

Best Arabidopsis Sequence Match ( AT2G39930.1 )
(BLAST)

001: MDAIKCSSSF LHHTKLNTLF SNHTFPKISA PNFKPLFRPI SISAKDRRSN EAENIAVVEK PLKSDRFFIS DGLPSPFGPT VRDDGVNFSV YSTNSVSATI
101: CLISLSDLRQ NKVTEEIQLD PSRNRTGHVW HVFLRGDFKD MLYGYRFDGK FSPEEGHYYD SSNILLDPYA KAIISRDEFG VLGPDDNCWP QMACMVPTRE
201: EEFDWEGDMH LKLPQKDLVI YEMHVRGFTR HESSKIEFPG TYQGVAEKLD HLKELGINCI ELMPCHEFNE LEYYSYNTIL GDHRVNFWGY STIGFFSPMI
301: RYASASSNNF AGRAINEFKI LVKEAHKRGI EVIMDVVLNH TAEGNEKGPI FSFRGVDNSV YYMLAPKGEF YNYSGCGNTF NCNHPVVRQF ILDCLRYWVT
401: EMHVDGFRFD LGSIMSRSSS LWDAANVYGA DVEGDLLTTG TPISCPPVID MISNDPILRG VKLIAEAWDA GGLYQVGMFP HWGIWSEWNG KFRDVVRQFI
501: KGTDGFSGAF AECLCGSPNL YQGGRKPWHS INFICAHDGF TLADLVTYNN KNNLANGEEN NDGENHNYSW NCGEEGDFAS ISVKRLRKRQ MRNFFVSLMV
601: SQGVPMIYMG DEYGHTKGGN NNTYCHDNYM NYFRWDKKEE AHSDFFRFCR ILIKFRDECE SLGLNDFPTA KRLQWHGLAP EIPNWSETSR FVAFSLVDSV
701: KKEIYVAFNT SHLATLVSLP NRPGYRWEPF VDTSKPSPYD CITPDLPERE TAMKQYRHFL DANVYPMLSY SSIILLLSPI KDP

Arabidopsis Description

ISA1ISA1 [Source:UniProtKB/TrEMBL;Acc:A0A178VW25]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.