Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G38430.1 | Thale cress | plastid | 92.78 | 92.27 |
| AT5G38420.1 | Thale cress | plastid | 91.11 | 90.61 |
| AT5G38410.3 | Thale cress | plastid | 91.11 | 88.17 |
| Bra034027.1-P | Field mustard | plastid | 88.33 | 87.85 |
| Bra034029.1-P | Field mustard | plastid | 88.33 | 87.85 |
| CDY12613 | Canola | plastid | 88.33 | 87.85 |
| CDY42337 | Canola | plastid | 85.56 | 85.08 |
| Bra034024.1-P | Field mustard | plastid | 85.0 | 84.53 |
| CDY42338 | Canola | plastid | 85.0 | 84.53 |
| CDY12616 | Canola | plastid | 84.44 | 83.98 |
| CDY42341 | Canola | plastid | 81.11 | 78.49 |
| PGSC0003DMT400067905 | Potato | plastid | 66.67 | 75.47 |
| GSMUA_Achr10P... | Banana | plasma membrane | 65.0 | 74.05 |
| GSMUA_Achr2P22730_001 | Banana | unclear | 64.44 | 73.42 |
| GSMUA_Achr8P18400_001 | Banana | cytosol | 10.56 | 73.08 |
| PGSC0003DMT400032975 | Potato | mitochondrion, plastid | 72.78 | 72.78 |
| GSMUA_Achr6P09710_001 | Banana | plastid | 63.33 | 72.15 |
| PGSC0003DMT400062138 | Potato | cytosol, plastid | 71.67 | 71.27 |
| PGSC0003DMT400050381 | Potato | cytosol, extracellular, plastid | 71.67 | 71.27 |
| Solyc03g034220.2.1 | Tomato | plastid | 70.56 | 70.56 |
| Solyc02g085950.2.1 | Tomato | extracellular | 70.56 | 70.56 |
| CDY12612 | Canola | cytosol | 47.22 | 70.25 |
| VIT_17s0000g03690.t01 | Wine grape | plastid | 70.0 | 70.0 |
| Solyc02g063150.2.1 | Tomato | nucleus, plastid | 70.0 | 69.61 |
| KRH46925 | Soybean | plastid | 33.89 | 67.78 |
| Os12t0274700-01 | Rice | plastid | 62.78 | 64.57 |
| HORVU1Hr1G035720.2 | Barley | plastid | 62.78 | 64.2 |
| Os12t0292400-01 | Rice | extracellular | 62.22 | 64.0 |
| Os12t0291400-01 | Rice | plastid | 62.22 | 64.0 |
| Os12t0291100-01 | Rice | plastid | 62.22 | 64.0 |
| HORVU2Hr1G010630.1 | Barley | plastid | 62.22 | 64.0 |
| HORVU2Hr1G010690.1 | Barley | plastid | 62.22 | 64.0 |
| HORVU5Hr1G051010.2 | Barley | plastid | 62.22 | 64.0 |
| HORVU5Hr1G033540.2 | Barley | plastid | 62.22 | 64.0 |
| HORVU5Hr1G038630.1 | Barley | plastid | 62.22 | 64.0 |
| TraesCS2A01G066700.1 | Wheat | plastid | 61.67 | 63.79 |
| TraesCS2D01G065300.1 | Wheat | plastid | 61.67 | 63.79 |
| TraesCS2B01G079300.1 | Wheat | plastid | 61.67 | 63.79 |
| TraesCS2D01G065500.1 | Wheat | plastid | 58.33 | 63.64 |
| TraesCS2B01G079400.1 | Wheat | plastid | 61.67 | 63.43 |
| TraesCS2D01G065600.1 | Wheat | plastid | 61.67 | 63.43 |
| TraesCS2D01G065200.1 | Wheat | plastid | 61.67 | 63.43 |
| TraesCS2D01G065400.1 | Wheat | plastid | 61.67 | 63.43 |
| TraesCS5A01G165700.1 | Wheat | plastid | 61.67 | 63.43 |
| TraesCS2B01G079200.1 | Wheat | plastid | 61.67 | 63.43 |
| TraesCS5A01G165400.2 | Wheat | plastid | 61.67 | 63.43 |
| TraesCS2A01G067300.1 | Wheat | plastid | 61.67 | 63.43 |
| TraesCS2A01G066800.1 | Wheat | plastid | 61.67 | 63.43 |
| TraesCS5B01G162600.1 | Wheat | plastid | 61.67 | 63.43 |
| TraesCS5B01G162800.1 | Wheat | plastid | 61.67 | 63.43 |
| TraesCS5D01G169600.2 | Wheat | plastid | 61.67 | 63.43 |
| TraesCS5D01G169900.2 | Wheat | plastid | 61.67 | 63.43 |
| TraesCS2B01G079100.1 | Wheat | plastid | 61.11 | 63.22 |
| TraesCS2A01G067100.1 | Wheat | plastid | 61.11 | 62.86 |
| TraesCS2A01G067200.1 | Wheat | plastid | 61.11 | 62.86 |
| TraesCS2D01G065100.2 | Wheat | plastid | 60.56 | 62.64 |
| Zm00001d004894_P001 | Maize | plastid | 58.89 | 62.35 |
| TraesCS2A01G067000.1 | Wheat | plastid | 60.56 | 62.29 |
| Zm00001d052595_P001 | Maize | plastid | 58.33 | 61.76 |
| EES09292 | Sorghum | plastid | 57.22 | 60.95 |
| TraesCS2B01G078900.2 | Wheat | plastid | 61.11 | 59.46 |
| HORVU2Hr1G010670.1 | Barley | plastid | 62.22 | 58.95 |
| KRH01757 | Soybean | plastid | 48.33 | 58.0 |
| TraesCS2A01G066900.1 | Wheat | plastid | 61.67 | 57.81 |
| TraesCS2B01G079500.1 | Wheat | plastid | 61.67 | 57.51 |
| KRG99964 | Soybean | plastid | 30.0 | 54.0 |
| KRG99965 | Soybean | plastid | 38.89 | 53.44 |
| HORVU5Hr1G050990.4 | Barley | plastid | 52.22 | 48.96 |
| Os12t0291200-00 | Rice | plastid | 25.0 | 46.88 |
| KRH15458 | Soybean | plastid | 39.44 | 44.65 |
| HORVU7Hr1G048050.2 | Barley | plastid | 18.89 | 38.64 |
Protein Annotations
| KEGG:00630+4.1.1.39 | KEGG:00710+4.1.1.39 | MapMan:1.2.1.1.2 | Gene3D:3.30.190.10 | EntrezGene:843029 | UniProt:A0A178WD57 |
| ProteinID:AAD10655.1 | EMBL:AC007152 | ProteinID:AEE34594.1 | EMBL:AF325004 | EMBL:AF325011 | EMBL:AF372874 |
| EMBL:AF410291 | EMBL:AK226468 | EMBL:AK226546 | EMBL:AK226565 | EMBL:AK226776 | ArrayExpress:AT1G67090 |
| EnsemblPlantsGene:AT1G67090 | RefSeq:AT1G67090 | TAIR:AT1G67090 | RefSeq:AT1G67090-TAIR-G | EnsemblPlants:AT1G67090.1 | TAIR:AT1G67090.1 |
| EMBL:AY054188 | EMBL:AY054581 | EMBL:AY058831 | EMBL:AY059940 | EMBL:AY062612 | EMBL:AY062711 |
| EMBL:AY065101 | EMBL:AY093380 | EMBL:AY093388 | EMBL:AY097366 | EMBL:BT000362 | EMBL:BT002076 |
| ProteinID:CAA31948.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004497 | GO:GO:0005488 | GO:GO:0005507 |
| GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0005840 | GO:GO:0005975 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009409 | GO:GO:0009507 | GO:GO:0009535 | GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009579 |
| GO:GO:0009628 | GO:GO:0009637 | GO:GO:0009853 | GO:GO:0009941 | GO:GO:0009987 | GO:GO:0010114 |
| GO:GO:0010218 | GO:GO:0015977 | GO:GO:0015979 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016491 |
| GO:GO:0016829 | GO:GO:0016984 | GO:GO:0019253 | GO:GO:0022626 | GO:GO:0031969 | GO:GO:0031977 |
| GO:GO:0048046 | GO:GO:0055114 | GO:GO:0080158 | GO:GO:0110102 | InterPro:IPR036385 | RefSeq:NP_176880.1 |
| ProteinID:OAP15425.1 | UniProt:P10795 | PFAM:PF00101 | PFAM:PF12338 | PO:PO:0000005 | PO:PO:0000025 |
| PO:PO:0000039 | PO:PO:0000045 | PO:PO:0000112 | PO:PO:0000223 | PO:PO:0000293 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0003011 | PO:PO:0005020 | PO:PO:0005059 | PO:PO:0005645 | PO:PO:0005679 |
| PO:PO:0006339 | PO:PO:0007131 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009025 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0020030 | PO:PO:0020100 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00152 |
| PANTHER:PTHR31262 | PANTHER:PTHR31262:SF0 | Symbol:RBCS1A | InterPro:RuBisCO_sc | InterPro:RuBisCO_sc_dom | InterPro:RuBisCO_ssu_N |
| InterPro:RuBisCO_ssu_sf | SMART:SM00961 | SUPFAM:SSF55239 | UniParc:UPI0000048412 | EMBL:X68342 | : |
Description
RBCS-1ARibulose bisphosphate carboxylase small chain [Source:UniProtKB/TrEMBL;Acc:A0A178WD57]
Coordinates
chr1:-:25048158..25049667
Molecular Weight (calculated)
20217.2 Da
IEP (calculated)
7.835
GRAVY (calculated)
-0.267
Length
180 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSMLSSAT MVASPAQATM VAPFNGLKSS AAFPATRKAN NDITSITSNG GRVNCMQVWP PIGKKKFETL SYLPDLTDSE LAKEVDYLIR NKWIPCVEFE
101: LEHGFVYREH GNSPGYYDGR YWTMWKLPLF GCTDSAQVLK EVEECKKEYP NAFIRIIGFD NTRQVQCISF IAYKPPSFTG
101: LEHGFVYREH GNSPGYYDGR YWTMWKLPLF GCTDSAQVLK EVEECKKEYP NAFIRIIGFD NTRQVQCISF IAYKPPSFTG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.