Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
- nucleus 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G38420.1 | Thale cress | plastid | 97.79 | 97.79 |
| AT5G38410.3 | Thale cress | plastid | 96.69 | 94.09 |
| Bra028174.1-P | Field mustard | plastid | 93.92 | 93.92 |
| CDY71122 | Canola | plastid | 93.92 | 93.92 |
| CDX74532 | Canola | plastid | 93.37 | 93.37 |
| CDY01671 | Canola | plastid | 93.37 | 93.37 |
| CDY52468 | Canola | plastid | 93.37 | 93.37 |
| CDX74525 | Canola | plastid | 92.82 | 92.82 |
| CDY01665 | Canola | plastid | 92.82 | 92.82 |
| AT1G67090.1 | Thale cress | plastid | 92.27 | 92.78 |
| Bra028181.1-P | Field mustard | plastid | 82.87 | 92.59 |
| Bra025431.1-P | Field mustard | plastid | 92.27 | 92.27 |
| CDX67402 | Canola | plastid | 92.27 | 92.27 |
| Bra028406.1-P | Field mustard | plastid | 91.71 | 91.71 |
| CDY67657 | Canola | plastid | 91.16 | 91.16 |
| CDX99682 | Canola | plastid | 92.27 | 88.36 |
| GSMUA_Achr8P18400_001 | Banana | cytosol | 11.05 | 76.92 |
| PGSC0003DMT400067905 | Potato | plastid | 67.4 | 76.73 |
| PGSC0003DMT400032975 | Potato | mitochondrion, plastid | 75.14 | 75.56 |
| GSMUA_Achr10P... | Banana | plasma membrane | 65.75 | 75.32 |
| GSMUA_Achr2P22730_001 | Banana | unclear | 65.19 | 74.68 |
| PGSC0003DMT400062138 | Potato | cytosol, plastid | 74.03 | 74.03 |
| Solyc02g085950.2.1 | Tomato | extracellular | 73.48 | 73.89 |
| PGSC0003DMT400050381 | Potato | cytosol, extracellular, plastid | 73.48 | 73.48 |
| GSMUA_Achr6P09710_001 | Banana | plastid | 64.09 | 73.42 |
| Solyc03g034220.2.1 | Tomato | plastid | 72.93 | 73.33 |
| KRH46925 | Soybean | plastid | 35.91 | 72.22 |
| Solyc02g063150.2.1 | Tomato | nucleus, plastid | 71.82 | 71.82 |
| VIT_17s0000g03690.t01 | Wine grape | plastid | 71.27 | 71.67 |
| Os12t0274700-01 | Rice | plastid | 62.43 | 64.57 |
| Os12t0291400-01 | Rice | plastid | 62.43 | 64.57 |
| Os12t0291100-01 | Rice | plastid | 61.88 | 64.0 |
| Os12t0292400-01 | Rice | extracellular | 61.88 | 64.0 |
| HORVU1Hr1G035720.2 | Barley | plastid | 61.33 | 63.07 |
| Zm00001d004894_P001 | Maize | plastid | 59.12 | 62.94 |
| HORVU5Hr1G051010.2 | Barley | plastid | 60.77 | 62.86 |
| HORVU5Hr1G038630.1 | Barley | plastid | 60.77 | 62.86 |
| HORVU5Hr1G033540.2 | Barley | plastid | 60.77 | 62.86 |
| HORVU2Hr1G010690.1 | Barley | plastid | 60.77 | 62.86 |
| HORVU2Hr1G010630.1 | Barley | plastid | 60.77 | 62.86 |
| TraesCS2D01G065300.1 | Wheat | plastid | 60.22 | 62.64 |
| TraesCS2B01G079300.1 | Wheat | plastid | 60.22 | 62.64 |
| TraesCS2A01G066700.1 | Wheat | plastid | 60.22 | 62.64 |
| TraesCS2D01G065500.1 | Wheat | plastid | 56.91 | 62.42 |
| Zm00001d052595_P001 | Maize | plastid | 58.56 | 62.35 |
| TraesCS5D01G169900.2 | Wheat | plastid | 60.22 | 62.29 |
| TraesCS2D01G065200.1 | Wheat | plastid | 60.22 | 62.29 |
| TraesCS2D01G065600.1 | Wheat | plastid | 60.22 | 62.29 |
| TraesCS2B01G079400.1 | Wheat | plastid | 60.22 | 62.29 |
| TraesCS5A01G165400.2 | Wheat | plastid | 60.22 | 62.29 |
| TraesCS2B01G079200.1 | Wheat | plastid | 60.22 | 62.29 |
| TraesCS5A01G165700.1 | Wheat | plastid | 60.22 | 62.29 |
| TraesCS2A01G067300.1 | Wheat | plastid | 60.22 | 62.29 |
| TraesCS5B01G162600.1 | Wheat | plastid | 60.22 | 62.29 |
| TraesCS5B01G162800.1 | Wheat | plastid | 60.22 | 62.29 |
| TraesCS5D01G169600.2 | Wheat | plastid | 60.22 | 62.29 |
| TraesCS2B01G079100.1 | Wheat | plastid | 59.67 | 62.07 |
| TraesCS2A01G067200.1 | Wheat | plastid | 59.67 | 61.71 |
| TraesCS2A01G067100.1 | Wheat | plastid | 59.67 | 61.71 |
| TraesCS2A01G066800.1 | Wheat | plastid | 59.67 | 61.71 |
| TraesCS2D01G065400.1 | Wheat | plastid | 59.67 | 61.71 |
| TraesCS2D01G065100.2 | Wheat | plastid | 59.12 | 61.49 |
| EES09292 | Sorghum | plastid | 56.91 | 60.95 |
| KRH01757 | Soybean | plastid | 50.28 | 60.67 |
| TraesCS2A01G067000.1 | Wheat | plastid | 58.56 | 60.57 |
| KRG99964 | Soybean | plastid | 32.6 | 59.0 |
| TraesCS2B01G078900.2 | Wheat | plastid | 59.67 | 58.38 |
| HORVU2Hr1G010670.1 | Barley | plastid | 60.77 | 57.89 |
| TraesCS2A01G066900.1 | Wheat | plastid | 60.22 | 56.77 |
| KRG99965 | Soybean | plastid | 40.88 | 56.49 |
| TraesCS2B01G079500.1 | Wheat | plastid | 60.22 | 56.48 |
| HORVU5Hr1G050990.4 | Barley | plastid | 50.83 | 47.92 |
| Os12t0291200-00 | Rice | plastid | 25.41 | 47.92 |
| KRH15458 | Soybean | plastid | 40.88 | 46.54 |
| HORVU7Hr1G048050.2 | Barley | plastid | 18.78 | 38.64 |
Protein Annotations
| KEGG:00630+4.1.1.39 | KEGG:00710+4.1.1.39 | MapMan:1.2.1.1.2 | Gene3D:3.30.190.10 | PDB:5IU0 | EntrezGene:833830 |
| ProteinID:AED94315.1 | EMBL:AF410283 | ProteinID:ANM69887.1 | ArrayExpress:AT5G38430 | EnsemblPlantsGene:AT5G38430 | RefSeq:AT5G38430 |
| TAIR:AT5G38430 | RefSeq:AT5G38430-TAIR-G | EnsemblPlants:AT5G38430.1 | TAIR:AT5G38430.1 | EMBL:AY143814 | ProteinID:BAB09355.1 |
| ProteinID:CAA32700.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004497 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005975 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009570 |
| GO:GO:0009579 | GO:GO:0009628 | GO:GO:0009637 | GO:GO:0009853 | GO:GO:0009941 | GO:GO:0009987 |
| GO:GO:0010114 | GO:GO:0010218 | GO:GO:0015977 | GO:GO:0015979 | GO:GO:0016020 | GO:GO:0016491 |
| GO:GO:0016829 | GO:GO:0016984 | GO:GO:0019253 | GO:GO:0019904 | GO:GO:0031969 | GO:GO:0048046 |
| GO:GO:0055114 | InterPro:IPR036385 | RefSeq:NP_001318696.1 | RefSeq:NP_198659.1 | UniProt:P10796 | PFAM:PF00101 |
| PFAM:PF12338 | PO:PO:0000039 | PO:PO:0000112 | PO:PO:0000223 | PO:PO:0000293 | PO:PO:0004726 |
| PO:PO:0005020 | PO:PO:0005645 | PO:PO:0006339 | PO:PO:0007131 | PO:PO:0009001 | PO:PO:0009025 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0020030 | PO:PO:0020100 | PRINTS:PR00152 | PANTHER:PTHR31262 |
| PANTHER:PTHR31262:SF0 | InterPro:RuBisCO_sc | InterPro:RuBisCO_sc_dom | InterPro:RuBisCO_ssu_N | InterPro:RuBisCO_ssu_sf | SMART:SM00961 |
| SUPFAM:SSF55239 | UniParc:UPI0000000B79 | SEG:seg | : | : | : |
Description
RBCS-1BRibulose bisphosphate carboxylase small chain 1B, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P10796]
Coordinates
chr5:-:15383167..15385320
Molecular Weight (calculated)
20287.3 Da
IEP (calculated)
7.834
GRAVY (calculated)
-0.192
Length
181 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSMLSSAA VVTSPAQATM VAPFTGLKSS ASFPVTRKAN NDITSITSNG GRVSCMKVWP PIGKKKFETL SYLPDLTDVE LAKEVDYLLR NKWIPCVEFE
101: LEHGFVYREH GNTPGYYDGR YWTMWKLPLF GCTDSAQVLK EVEECKKEYP GAFIRIIGFD NTRQVQCISF IAYKPPSFTD A
101: LEHGFVYREH GNTPGYYDGR YWTMWKLPLF GCTDSAQVLK EVEECKKEYP GAFIRIIGFD NTRQVQCISF IAYKPPSFTD A
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.