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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 9
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG92600
KRG93305
KRH07953
KRH10294
KRH14106
KRH16959
KRH23029
KRH24840
KRH27601
KRH29844
KRH34180
KRH38067
KRH39044
KRH41413
KRH53667
KRH56614
KRH61471
KRH64261
KRH66789
KRH69706
KRH72058
KRH74010
KRH77881

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G67090.1 KRH10294 AT3G46090.1 17259181
AT1G67090.1 KRH23029 AT3G46090.1 17259181
AT1G67090.1 KRH24840 AT3G46090.1 17259181
AT1G67090.1 KRH29844 AT3G46090.1 17259181
AT1G67090.1 KRH14106 AT5G35750.1 18642946
AT1G67090.1 KRH74010 AT5G35750.1 18642946
AT5G38420.1 KRH66789 AT2G41370.1 21798944
AT5G38420.1 KRH72058 AT2G41370.1 21798944
AT5G38420.1 KRG92600 AT3G04240.1 21798944
AT5G38420.1 KRH34180 AT3G04240.1 21798944
AT5G38420.1 KRH38067 AT3G04240.1 21798944
AT5G38420.1 KRH39044 AT3G17860.1 21798944
AT5G38420.1 KRG93305 AT3G27960.1 21798944
AT5G38420.1 KRH56614 AT3G27960.1 21798944
AT5G38420.1 KRH27601 AT4G04890.1 21798944
AT5G38420.1 KRH77881 AT4G04890.1 21798944
AT5G38420.1 KRH61471 AT4G08150.1 21798944
AT5G38420.1 KRH07953 AT5G11980.1 21798944
AT5G38420.1 KRH69706 AT5G11980.1 21798944
AT5G38420.1 KRH16959 AT5G24660.1 21798944
AT5G38420.1 KRH53667 AT5G24660.1 21798944
AT5G38420.1 KRH64261 AT5G24660.1 21798944
AT5G38430.1 KRH41413 AT2G39930.1 21798944
AT5G38430.1 KRH10294 AT3G46090.1 17259181
AT5G38430.1 KRH23029 AT3G46090.1 17259181
AT5G38430.1 KRH24840 AT3G46090.1 17259181
AT5G38430.1 KRH29844 AT3G46090.1 17259181
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH46925 Soybean plastid 54.09 95.56
KRG99964 Soybean plastid 48.43 77.0
KRG99965 Soybean plastid 53.46 64.89
GSMUA_Achr8P18400_001 Banana cytosol 8.81 53.85
KRH18247 Soybean nucleus, plastid 52.83 47.19
KRG93873 Soybean plastid 30.82 46.67
KRG93867 Soybean plastid 52.2 46.63
KRG93871 Soybean plastid 52.2 46.63
KRG93872 Soybean plastid 38.99 45.93
PGSC0003DMT400032975 Potato mitochondrion, plastid 47.8 42.22
Solyc02g085950.2.1 Tomato extracellular 47.17 41.67
PGSC0003DMT400050381 Potato cytosol, extracellular, plastid 46.54 40.88
AT5G38430.1 Thale cress plastid 46.54 40.88
Os12t0291200-00 Rice plastid 24.53 40.62
Bra028174.1-P Field mustard plastid 45.91 40.33
Bra025431.1-P Field mustard plastid 45.91 40.33
AT5G38420.1 Thale cress plastid 45.91 40.33
CDY71122 Canola plastid 45.91 40.33
CDY52468 Canola plastid 45.91 40.33
AT5G38410.3 Thale cress plastid 47.17 40.32
Solyc03g034220.2.1 Tomato plastid 45.28 40.0
CDX67402 Canola plastid 45.28 39.78
PGSC0003DMT400062138 Potato cytosol, plastid 45.28 39.78
AT1G67090.1 Thale cress plastid 44.65 39.44
CDY01665 Canola plastid 44.65 39.23
CDY01671 Canola plastid 44.65 39.23
CDX74532 Canola plastid 44.65 39.23
CDY67657 Canola plastid 44.65 39.23
Bra028406.1-P Field mustard plastid 44.65 39.23
PGSC0003DMT400067905 Potato plastid 38.99 38.99
Solyc02g063150.2.1 Tomato nucleus, plastid 44.03 38.67
CDX74525 Canola plastid 44.03 38.67
CDX99682 Canola plastid 45.28 38.1
VIT_17s0000g03690.t01 Wine grape plastid 42.77 37.78
Bra028181.1-P Field mustard plastid 38.36 37.65
GSMUA_Achr6P09710_001 Banana plastid 35.85 36.08
GSMUA_Achr2P22730_001 Banana unclear 35.85 36.08
CDY42337 Canola plastid 40.88 35.91
Bra034024.1-P Field mustard plastid 40.25 35.36
CDY12616 Canola plastid 40.25 35.36
Bra034027.1-P Field mustard plastid 39.62 34.81
Bra034029.1-P Field mustard plastid 39.62 34.81
CDY42338 Canola plastid 39.62 34.81
CDY12613 Canola plastid 39.62 34.81
KRH01757 Soybean plastid 32.7 34.67
GSMUA_Achr10P... Banana plasma membrane 33.96 34.18
EES09292 Sorghum plastid 35.85 33.73
Os12t0292400-01 Rice extracellular 36.48 33.14
Os12t0291400-01 Rice plastid 36.48 33.14
Os12t0274700-01 Rice plastid 36.48 33.14
Os12t0291100-01 Rice plastid 36.48 33.14
Zm00001d052595_P001 Maize plastid 35.22 32.94
Zm00001d004894_P001 Maize plastid 35.22 32.94
TraesCS2D01G065300.1 Wheat plastid 35.85 32.76
TraesCS2B01G079300.1 Wheat plastid 35.85 32.76
TraesCS2A01G066700.1 Wheat plastid 35.85 32.76
TraesCS2D01G065200.1 Wheat plastid 35.85 32.57
TraesCS2B01G079400.1 Wheat plastid 35.85 32.57
HORVU2Hr1G010630.1 Barley plastid 35.85 32.57
TraesCS2B01G079200.1 Wheat plastid 35.85 32.57
TraesCS2A01G067300.1 Wheat plastid 35.85 32.57
TraesCS2A01G066800.1 Wheat plastid 35.85 32.57
HORVU2Hr1G010690.1 Barley plastid 35.85 32.57
TraesCS2D01G065600.1 Wheat plastid 35.85 32.57
TraesCS2D01G065400.1 Wheat plastid 35.85 32.57
HORVU1Hr1G035720.2 Barley plastid 35.85 32.39
TraesCS2B01G079100.1 Wheat plastid 35.22 32.18
TraesCS2D01G065100.2 Wheat plastid 35.22 32.18
TraesCS2D01G065500.1 Wheat plastid 33.33 32.12
TraesCS5A01G165400.2 Wheat plastid 35.22 32.0
TraesCS2A01G067100.1 Wheat plastid 35.22 32.0
TraesCS5D01G169900.2 Wheat plastid 35.22 32.0
TraesCS5A01G165700.1 Wheat plastid 35.22 32.0
TraesCS5B01G162600.1 Wheat plastid 35.22 32.0
TraesCS5D01G169600.2 Wheat plastid 35.22 32.0
TraesCS5B01G162800.1 Wheat plastid 35.22 32.0
TraesCS2A01G067200.1 Wheat plastid 35.22 32.0
HORVU5Hr1G033540.2 Barley plastid 35.22 32.0
HORVU5Hr1G038630.1 Barley plastid 35.22 32.0
HORVU5Hr1G051010.2 Barley plastid 35.22 32.0
CDY42341 Canola plastid 37.11 31.72
TraesCS2A01G067000.1 Wheat plastid 34.59 31.43
TraesCS2B01G078900.2 Wheat plastid 35.22 30.27
HORVU2Hr1G010670.1 Barley plastid 35.85 30.0
TraesCS2A01G066900.1 Wheat plastid 35.85 29.69
TraesCS2B01G079500.1 Wheat plastid 35.85 29.53
HORVU5Hr1G050990.4 Barley plastid 33.96 28.12
KRH19034 Soybean plastid 30.19 27.91
HORVU7Hr1G048050.2 Barley plastid 13.84 25.0
CDY12612 Canola cytosol 14.47 19.01
Protein Annotations
KEGG:00630+4.1.1.39KEGG:00710+4.1.1.39MapMan:1.2.1.1.2Gene3D:3.30.190.10UniProt:A0A0R0GHW8EMBL:ACUP02008602
EnsemblPlantsGene:GLYMA_14G089500GO:GO:0003674GO:GO:0003824GO:GO:0004497GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0008150GO:GO:0008152GO:GO:0009536GO:GO:0009853
GO:GO:0009987GO:GO:0015977GO:GO:0015979GO:GO:0016491GO:GO:0016829GO:GO:0016984
GO:GO:0055114InterPro:IPR036385EnsemblPlants:KRH15458ProteinID:KRH15458ProteinID:KRH15458.1PFAM:PF00101
PFAM:PF12338PRINTS:PR00152PANTHER:PTHR31262MetaCyc:PWY-5532MetaCyc:PWY-5723InterPro:RuBisCO_sc
InterPro:RuBisCO_sc_domInterPro:RuBisCO_ssu_NInterPro:RuBisCO_ssu_sfSUPFAM:SSF55239UniParc:UPI0006EDAEFA:
Description
hypothetical protein
Coordinates
chr14:-:8143278..8143951
Molecular Weight (calculated)
17827.7 Da
IEP (calculated)
10.446
GRAVY (calculated)
-0.533
Length
159 amino acids
Sequence
(BLAST)
001: MASSMMSSPA VTTVNRGSMV APFSGLKSMA GFPVRKTKYD ITSIASNTGR VWPRIGKKKF ETPSYLPPLT REQLLKEDGW IPCLEFELEL PMFGCTDSAQ
101: VLKEVHEAKN GVLMLKDINY PTVQKQKARN KNTSRKRCSL TNNCNLELKN KRSIQSNPT
Best Arabidopsis Sequence Match ( AT5G38410.2 )
(BLAST)
001: MASSMLSSAA VVTSPAQATM VAPFTGLKSS AAFPVTRKTN KDITSIASNG GRVSCMKVWP PIGKKKFETL SYLPDLSDVE LAKEVDYLLR NKWIPCVEFE
101: LEHGNTPGYY DGRYWTMWKL PLFGCTDSAQ VLKEVEECKK EYPGAFIRII GFDNTRQVQC ISFIAYKPPS FTEA
Arabidopsis Description
Ribulose bisphosphate carboxylase small chain [Source:UniProtKB/TrEMBL;Acc:B3H5S2]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.