CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH46925	Soybean	plastid	42.96	64.44
KRG93871	Soybean	plastid	84.44	64.04
KRG93867	Soybean	plastid	84.44	64.04
KRH18247	Soybean	nucleus, plastid	83.7	63.48
GSMUA_Achr8P18400_001	Banana	cytosol	11.11	57.69
PGSC0003DMT400067905	Potato	plastid	60.74	51.57
PGSC0003DMT400032975	Potato	mitochondrion, plastid	68.15	51.11
PGSC0003DMT400050381	Potato	cytosol, extracellular, plastid	68.15	50.83
Solyc03g034220.2.1	Tomato	plastid	67.41	50.56
Solyc02g085950.2.1	Tomato	extracellular	67.41	50.56
PGSC0003DMT400062138	Potato	cytosol, plastid	67.41	50.28
KRG99964	Soybean	plastid	37.04	50.0
Solyc02g063150.2.1	Tomato	nucleus, plastid	65.93	49.17
GSMUA_Achr10P...	Banana	plasma membrane	56.3	48.1
GSMUA_Achr2P22730_001	Banana	unclear	55.56	47.47
GSMUA_Achr6P09710_001	Banana	plastid	55.56	47.47
KRH01757	Soybean	plastid	51.85	46.67
Os12t0274700-01	Rice	plastid	58.52	45.14
Os12t0291100-01	Rice	plastid	58.52	45.14
Os12t0292400-01	Rice	extracellular	57.78	44.57
Os12t0291400-01	Rice	plastid	57.04	44.0
EES09292	Sorghum	plastid	53.33	42.6
TraesCS2D01G065500.1	Wheat	plastid	51.85	42.42
Zm00001d004894_P001	Maize	plastid	53.33	42.35
Zm00001d052595_P001	Maize	plastid	52.59	41.76
Os12t0291200-00	Rice	plastid	29.63	41.67
HORVU1Hr1G035720.2	Barley	plastid	54.07	41.48
HORVU5Hr1G051010.2	Barley	plastid	53.33	41.14
HORVU5Hr1G033540.2	Barley	plastid	53.33	41.14
HORVU5Hr1G038630.1	Barley	plastid	53.33	41.14
TraesCS5A01G165700.1	Wheat	plastid	52.59	40.57
TraesCS5A01G165400.2	Wheat	plastid	52.59	40.57
TraesCS5B01G162600.1	Wheat	plastid	52.59	40.57
TraesCS5B01G162800.1	Wheat	plastid	52.59	40.57
TraesCS5D01G169600.2	Wheat	plastid	52.59	40.57
HORVU2Hr1G010630.1	Barley	plastid	52.59	40.57
TraesCS5D01G169900.2	Wheat	plastid	52.59	40.57
HORVU2Hr1G010690.1	Barley	plastid	52.59	40.57
TraesCS2A01G066700.1	Wheat	plastid	51.85	40.23
TraesCS2D01G065300.1	Wheat	plastid	51.85	40.23
TraesCS2B01G079300.1	Wheat	plastid	51.85	40.23
TraesCS2B01G079200.1	Wheat	plastid	51.85	40.0
TraesCS2D01G065600.1	Wheat	plastid	51.85	40.0
TraesCS2D01G065400.1	Wheat	plastid	51.85	40.0
TraesCS2D01G065200.1	Wheat	plastid	51.85	40.0
TraesCS2B01G079400.1	Wheat	plastid	51.85	40.0
TraesCS2A01G067300.1	Wheat	plastid	51.85	40.0
TraesCS2A01G066800.1	Wheat	plastid	51.85	40.0
KRG99965	Soybean	plastid	38.52	39.69
TraesCS2B01G079100.1	Wheat	plastid	51.11	39.66
TraesCS2D01G065100.2	Wheat	plastid	51.11	39.66
TraesCS2A01G067200.1	Wheat	plastid	51.11	39.43
TraesCS2A01G067100.1	Wheat	plastid	51.11	39.43
KRH15458	Soybean	plastid	45.93	38.99
TraesCS2A01G067000.1	Wheat	plastid	50.37	38.86
HORVU2Hr1G010670.1	Barley	plastid	52.59	37.37
TraesCS2B01G078900.2	Wheat	plastid	51.11	37.3
TraesCS2A01G066900.1	Wheat	plastid	51.85	36.46
TraesCS2B01G079500.1	Wheat	plastid	51.85	36.27
KRG93873	Soybean	plastid	26.67	34.29
KRH19034	Soybean	plastid	40.74	31.98
HORVU7Hr1G048050.2	Barley	plastid	20.74	31.82
HORVU5Hr1G050990.4	Barley	plastid	42.96	30.21

Protein Annotations

KEGG:00630+4.1.1.39	KEGG:00710+4.1.1.39	MapMan:1.2.1.1.2	Gene3D:3.30.190.10	EMBL:ACUP02011638	EnsemblPlantsGene:GLYMA_19G046900
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009853
GO:GO:0009987	GO:GO:0015977	GO:GO:0015979	GO:GO:0016491	GO:GO:0016829	GO:GO:0016984
GO:GO:0055114	InterPro:IPR036385	UniProt:K7MWK6	EnsemblPlants:KRG93872	ProteinID:KRG93872	ProteinID:KRG93872.1
PFAM:PF00101	PFAM:PF12338	PRINTS:PR00152	PANTHER:PTHR31262	PANTHER:PTHR31262:SF0	MetaCyc:PWY-5532
MetaCyc:PWY-5723	InterPro:RuBisCO_sc	InterPro:RuBisCO_sc_dom	InterPro:RuBisCO_ssu_N	InterPro:RuBisCO_ssu_sf	SMART:SM00961
SUPFAM:SSF55239	UniParc:UPI00029518AE	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr19:+:7280255..7281335

Molecular Weight (calculated)

14814.0 Da

IEP (calculated)

9.860

GRAVY (calculated)

-0.064

Length

135 amino acids

Sequence
(BLAST)

001: MASSPISSPV VTIINRVGVS MVAPFTGLKS MAGIPTRKTN SDITSIATNG GRVWPPVGKK KFGTFSYLPD LDDAQLAKET IWKHPMFGCT DASQVLKELQ
101: EAKTTYPNSF IRIIGFDNIR QVQCISFIAY KPPDF

Best Arabidopsis Sequence Match ( AT5G38410.2 )
(BLAST)

001: MASSMLSSAA VVTSPAQATM VAPFTGLKSS AAFPVTRKTN KDITSIASNG GRVSCMKVWP PIGKKKFETL SYLPDLSDVE LAKEVDYLLR NKWIPCVEFE
101: LEHGNTPGYY DGRYWTMWKL PLFGCTDSAQ VLKEVEECKK EYPGAFIRII GFDNTRQVQC ISFIAYKPPS FTEA

Arabidopsis Description

Ribulose bisphosphate carboxylase small chain [Source:UniProtKB/TrEMBL;Acc:B3H5S2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.